RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 TRBC2A0A5B9 178 aa26.27■■□□□ 1.8
SMARCD3-201ENST00000262188 SDHDO14521 159 aa26.27■■□□□ 1.8
SMARCD3-201ENST00000262188 TBX6O95947 436 aaPredicted RBP26.27■■□□□ 1.8
SMARCD3-201ENST00000262188 CHEK2O96017 543 aa26.27■■□□□ 1.8
SMARCD3-201ENST00000262188 TGFB1P01137 390 aa26.27■■□□□ 1.8
SMARCD3-201ENST00000262188 HNRNPCP07910 306 aaKnown RBP eCLIP26.27■■□□□ 1.8
SMARCD3-201ENST00000262188 TMEM71Q6P5X7 295 aa26.27■■□□□ 1.8
SMARCD3-201ENST00000262188 B3GNT8Q7Z7M8 397 aa26.27■■□□□ 1.8
SMARCD3-201ENST00000262188 ZUFSPQ96AP4 578 aa26.27■■□□□ 1.8
SMARCD3-201ENST00000262188 PTTG2Q9NZH5 202 aa26.27■■□□□ 1.8
SMARCD3-201ENST00000262188 CFAP54Q96N23 3096 aa26.27■■□□□ 1.8
SMARCD3-201ENST00000262188 SAP18O00422 153 aaKnown RBP26.26■■□□□ 1.79
SMARCD3-201ENST00000262188 HGSO14964 777 aaPredicted RBP26.26■■□□□ 1.79
SMARCD3-201ENST00000262188 ALOX15P16050 662 aaPredicted RBP26.26■■□□□ 1.79
SMARCD3-201ENST00000262188 GRK3P35626 688 aa26.26■■□□□ 1.79
SMARCD3-201ENST00000262188 SNRPNP63162 240 aaKnown RBP26.26■■□□□ 1.79
SMARCD3-201ENST00000262188 EPGNQ6UW88 154 aa26.26■■□□□ 1.79
SMARCD3-201ENST00000262188 Q6ZSR9 355 aa26.26■■□□□ 1.79
SMARCD3-201ENST00000262188 AFAP1L2Q8N4X5 818 aa26.26■■□□□ 1.79
SMARCD3-201ENST00000262188 TIMMDC1Q9NPL8 285 aa26.26■■□□□ 1.79
SMARCD3-201ENST00000262188 IGHV5-10-1A0A0J9YXX1 117 aa26.26■■□□□ 1.79
SMARCD3-201ENST00000262188 NTN3O00634 580 aaPredicted RBP26.26■■□□□ 1.79
SMARCD3-201ENST00000262188 MFSD4BQ5TF39 518 aa26.26■■□□□ 1.79
SMARCD3-201ENST00000262188 VN1R4Q7Z5H5 301 aa26.26■■□□□ 1.79
SMARCD3-201ENST00000262188 C10orf82Q8WW14 230 aa26.26■■□□□ 1.79
SMARCD3-201ENST00000262188 FAR2Q96K12 515 aa26.26■■□□□ 1.79
SMARCD3-201ENST00000262188 MEAF6Q9HAF1 191 aa26.26■■□□□ 1.79
SMARCD3-201ENST00000262188 STARD5Q9NSY2 213 aa26.26■■□□□ 1.79
SMARCD3-201ENST00000262188 TOR4AQ9NXH8 423 aa26.26■■□□□ 1.79
SMARCD3-201ENST00000262188 VTI1BQ9UEU0 232 aa26.26■■□□□ 1.79
SMARCD3-201ENST00000262188 KLK4Q9Y5K2 254 aa26.26■■□□□ 1.79
SMARCD3-201ENST00000262188 HNRNPRO43390 633 aaKnown RBP26.25■■□□□ 1.79
SMARCD3-201ENST00000262188 HRH2P25021 359 aa26.25■■□□□ 1.79
SMARCD3-201ENST00000262188 CXCR2P25025 360 aa26.25■■□□□ 1.79
SMARCD3-201ENST00000262188 RAB15P59190 212 aa26.25■■□□□ 1.79
SMARCD3-201ENST00000262188 SQSTM1Q13501 440 aa26.25■■□□□ 1.79
SMARCD3-201ENST00000262188 RNF31Q96EP0 1072 aa26.25■■□□□ 1.79
SMARCD3-201ENST00000262188 CCDC74BQ96LY2 380 aa26.25■■□□□ 1.79
SMARCD3-201ENST00000262188 OR2A5Q96R48 311 aa26.25■■□□□ 1.79
SMARCD3-201ENST00000262188 OR51B5Q9H339 312 aa26.25■■□□□ 1.79
SMARCD3-201ENST00000262188 DMRT3Q9NQL9 472 aa26.25■■□□□ 1.79
SMARCD3-201ENST00000262188 CCL27Q9Y4X3 112 aa26.25■■□□□ 1.79
SMARCD3-201ENST00000262188 PCNX2A6NKB5 2137 aa26.25■■□□□ 1.79
SMARCD3-201ENST00000262188 D6RAR5 112 aa26.24■■□□□ 1.79
SMARCD3-201ENST00000262188 P2RX6O15547 441 aa26.24■■□□□ 1.79
SMARCD3-201ENST00000262188 XKR7Q5GH72 579 aa26.24■■□□□ 1.79
SMARCD3-201ENST00000262188 MAGEB10Q96LZ2 347 aaPredicted RBP26.24■■□□□ 1.79
SMARCD3-201ENST00000262188 CD180Q99467 661 aa26.24■■□□□ 1.79
SMARCD3-201ENST00000262188 ARPC5LQ9BPX5 153 aa26.24■■□□□ 1.79
SMARCD3-201ENST00000262188 ZFYVE21Q9BQ24 234 aa26.24■■□□□ 1.79
SMARCD3-201ENST00000262188 AICDAQ9GZX7 198 aa26.24■■□□□ 1.79
SMARCD3-201ENST00000262188 PTPRZ1P23471 2315 aaPredicted RBP26.24■■□□□ 1.79
SMARCD3-201ENST00000262188 ANKDD1BA6NHY2 528 aa26.24■■□□□ 1.79
SMARCD3-201ENST00000262188 SLCO1B7G3V0H7 640 aa26.24■■□□□ 1.79
SMARCD3-201ENST00000262188 GFRA3O60609 400 aa26.24■■□□□ 1.79
SMARCD3-201ENST00000262188 EIF2S1P05198 315 aaKnown RBP26.24■■□□□ 1.79
SMARCD3-201ENST00000262188 GP1BAP07359 652 aa26.24■■□□□ 1.79
SMARCD3-201ENST00000262188 PIM1P11309 404 aaPredicted RBP26.24■■□□□ 1.79
SMARCD3-201ENST00000262188 MLLT3P42568 568 aaPredicted RBP26.24■■□□□ 1.79
SMARCD3-201ENST00000262188 TRIP6Q15654 476 aaKnown RBP26.24■■□□□ 1.79
SMARCD3-201ENST00000262188 NXNQ6DKJ4 435 aa26.24■■□□□ 1.79
SMARCD3-201ENST00000262188 ST13P4Q8IZP2 240 aaPredicted RBP26.24■■□□□ 1.79
SMARCD3-201ENST00000262188 MFSD9Q8NBP5 474 aa26.24■■□□□ 1.79
SMARCD3-201ENST00000262188 CREB3L4Q8TEY5 395 aa26.24■■□□□ 1.79
SMARCD3-201ENST00000262188 CDC6Q99741 560 aa26.24■■□□□ 1.79
SMARCD3-201ENST00000262188 AKTIPQ9H8T0 292 aa26.24■■□□□ 1.79
SMARCD3-201ENST00000262188 NDUFS4O43181 175 aa26.23■■□□□ 1.79
SMARCD3-201ENST00000262188 FOXD2O60548 495 aaPredicted RBP26.23■■□□□ 1.79
SMARCD3-201ENST00000262188 FKBP9O95302 570 aa26.23■■□□□ 1.79
SMARCD3-201ENST00000262188 LYNP07948 512 aa26.23■■□□□ 1.79
SMARCD3-201ENST00000262188 ARFIP2P53365 341 aa26.23■■□□□ 1.79
SMARCD3-201ENST00000262188 PHF19Q5T6S3 580 aa26.23■■□□□ 1.79
SMARCD3-201ENST00000262188 RNF44Q7L0R7 432 aa26.23■■□□□ 1.79
SMARCD3-201ENST00000262188 OR4D9Q8NGE8 314 aa26.23■■□□□ 1.79
SMARCD3-201ENST00000262188 TUBGCP3Q96CW5 907 aa26.23■■□□□ 1.79
SMARCD3-201ENST00000262188 MARK4Q96L34 752 aa26.23■■□□□ 1.79
SMARCD3-201ENST00000262188 RHBGQ9H310 441 aa26.23■■□□□ 1.79
SMARCD3-201ENST00000262188 KLHL31Q9H511 634 aa26.23■■□□□ 1.79
SMARCD3-201ENST00000262188 H0YGG7 62 aa26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 MAP3K7O43318 606 aa26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 ZBTB11O95625 1053 aaPredicted RBP26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 HK2P52789 917 aa26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 PDX1P52945 283 aa26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 VSX2P58304 361 aaPredicted RBP26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 ARF3P61204 181 aaPredicted RBP26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 RPS15AP62244 130 aaKnown RBP26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 SLC34A1Q06495 639 aa26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 TMEM198Q66K66 360 aa26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 RIPOR1Q6ZS17 1223 aa26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 UBE2E3Q969T4 207 aa26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 REPS1Q96D71 796 aa26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 F2RL3Q96RI0 385 aa26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 NT5DC2Q9H857 520 aa26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 ANKMY1Q9P2S6 941 aa26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 ZFP69BQ9UJL9 534 aa26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 SPTBP11277 2137 aa26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 SPAARA0A1B0GVQ0 90 aa26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 TRPC5OSA6NMA1 111 aa26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 THRAP10827 490 aa26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 CYLC2Q14093 348 aaPredicted RBP26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms