RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 MED26O95402 600 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 ANXA5P08758 320 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 PRKAR2AP13861 404 aaKnown RBP12.5□□□□□ -0.41
SNX1-201ENST00000261889 TYMPP19971 482 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 DGKAP23743 735 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 PCBP1Q15365 356 aaKnown RBP eCLIP12.5□□□□□ -0.41
SNX1-201ENST00000261889 ATG9BQ674R7 924 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 TXNDC8Q6A555 127 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 SERINC5Q86VE9 423 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 TSPYL5Q86VY4 417 aaPredicted RBP12.5□□□□□ -0.41
SNX1-201ENST00000261889 MMAAQ8IVH4 418 aaKnown RBP12.5□□□□□ -0.41
SNX1-201ENST00000261889 GHDCQ8N2G8 530 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 ARSGQ96EG1 525 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 WFDC6Q9BQY6 131 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 PRR14Q9BWN1 585 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 BARHL1Q9BZE3 327 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 CRISPLD2Q9H0B8 497 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 ALPK3Q96L96 1907 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 A0A0G2JN53 185 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.5□□□□□ -0.41
SNX1-201ENST00000261889 A0A1W2PQ09 198 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 SYNDIG1LA6NDD5 238 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 GABRR3A8MPY1 467 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 H3BN98 237 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 ERN1O75460 977 aaKnown RBP12.5□□□□□ -0.41
SNX1-201ENST00000261889 GCM2O75603 506 aaPredicted RBP12.5□□□□□ -0.41
SNX1-201ENST00000261889 SRCP12931 536 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 ITGALP20701 1170 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 BDKRB1P46663 353 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 CLDN8P56748 225 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 KCNJ10P78508 379 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 NAE1Q13564 534 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 ARHGEF6Q15052 776 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 NFE2Q16621 373 aaPredicted RBP12.5□□□□□ -0.41
SNX1-201ENST00000261889 PROX2Q3B8N5 592 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 TRAF7Q6Q0C0 670 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 OR9Q1Q8NGQ5 310 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 BCL7CQ8WUZ0 217 aaPredicted RBP12.5□□□□□ -0.41
SNX1-201ENST00000261889 ARMC5Q96C12 935 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 VPS35Q96QK1 796 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 MGLLQ99685 303 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 NDUFAF4Q9P032 175 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 SPASTQ9UBP0 616 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 WBP11Q9Y2W2 641 aaKnown RBP12.5□□□□□ -0.41
SNX1-201ENST00000261889 OARD1Q9Y530 152 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 WDR87Q6ZQQ6 2873 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 SLC38A8A6NNN8 435 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 WASHC1A8K0Z3 465 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 PLD2O14939 933 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 NPPAP01160 153 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 INHAP05111 366 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 CNR2P34972 360 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 WNT3P56703 355 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 SMAD3P84022 425 aaKnown RBP12.5□□□□□ -0.41
SNX1-201ENST00000261889 B4GALNT1Q00973 533 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 RFX4Q33E94 735 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 INO80DQ53TQ3 878 aaPredicted RBP12.5□□□□□ -0.41
SNX1-201ENST00000261889 ZNF385BQ569K4 471 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 C10orf62Q5T681 223 aaPredicted RBP12.5□□□□□ -0.41
SNX1-201ENST00000261889 PPP2R2DQ66LE6 453 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 TNFAIP8L2Q6P589 184 aaPredicted RBP12.5□□□□□ -0.41
SNX1-201ENST00000261889 WASH2PQ6VEQ5 465 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 SLC46A3Q7Z3Q1 461 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 AQP11Q8NBQ7 271 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 CHAC2Q8WUX2 184 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 RAB8BQ92930 207 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 PDLIM5Q96HC4 596 aaKnown RBP12.5□□□□□ -0.41
SNX1-201ENST00000261889 RDH12Q96NR8 316 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 MAGEH1Q9H213 219 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 TAS2R9Q9NYW1 312 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 LHX3Q9UBR4 397 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 PSORS1C1Q9UIG5 152 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 DNMT3LQ9UJW3 386 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 CFAP54Q96N23 3096 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 HAT1O14929 419 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 AKR7A2O43488 359 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 C6orf47O95873 294 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 TGFB1P01137 390 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 ATXN8OSP0DMR3 200 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 HOXB8P17481 243 aaPredicted RBP12.49□□□□□ -0.41
SNX1-201ENST00000261889 JUNDP17535 347 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 MAPKAPK2P49137 400 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 RNF144AP50876 292 aaPredicted RBP12.49□□□□□ -0.41
SNX1-201ENST00000261889 ACSM2AQ08AH3 577 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 TCEA2Q15560 299 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 ACSM2BQ68CK6 577 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 RBFAQ8N0V3 343 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 ARL14EPQ8N8R7 260 aaPredicted RBP12.49□□□□□ -0.41
SNX1-201ENST00000261889 OR4A15Q8NGL6 344 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 TXNDC15Q96J42 360 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 FAM129BQ96TA1 746 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 OR51B5Q9H339 312 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 LYVE1Q9Y5Y7 322 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 PRAMEF33A0A0G2JMD5 474 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 GSAPA4D1B5 854 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 PRAMEF10O60809 474 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 NCR1O76036 304 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 APOA1P02647 267 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 C9P02748 559 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 SPTBP11277 2137 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms