RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 RAB43Q86YS6 212 aa17.8■□□□□ 0.44
CYSTM1-201ENST00000261811 CCNYL1Q8N7R7 359 aa17.8■□□□□ 0.44
CYSTM1-201ENST00000261811 L3MBTL4Q8NA19 623 aa17.8■□□□□ 0.44
CYSTM1-201ENST00000261811 OR7G3Q8NG95 312 aa17.8■□□□□ 0.44
CYSTM1-201ENST00000261811 CREB3L4Q8TEY5 395 aa17.8■□□□□ 0.44
CYSTM1-201ENST00000261811 GAL3ST3Q96A11 431 aa17.8■□□□□ 0.44
CYSTM1-201ENST00000261811 MIEF2Q96C03 454 aa17.8■□□□□ 0.44
CYSTM1-201ENST00000261811 IP6K3Q96PC2 410 aa17.8■□□□□ 0.44
CYSTM1-201ENST00000261811 SSU72Q9NP77 194 aaKnown RBP17.8■□□□□ 0.44
CYSTM1-201ENST00000261811 C14orf105Q9NVL8 296 aa17.8■□□□□ 0.44
CYSTM1-201ENST00000261811 TRPC4Q9UBN4 977 aa17.8■□□□□ 0.44
CYSTM1-201ENST00000261811 ZNF490Q9ULM2 529 aaPredicted RBP17.8■□□□□ 0.44
CYSTM1-201ENST00000261811 PTRH2Q9Y3E5 179 aaKnown RBP17.8■□□□□ 0.44
CYSTM1-201ENST00000261811 TSC22D4Q9Y3Q8 395 aa17.8■□□□□ 0.44
CYSTM1-201ENST00000261811 ACTL7BQ9Y614 415 aa17.8■□□□□ 0.44
CYSTM1-201ENST00000261811 PKD1L2Q7Z442 2459 aa17.8■□□□□ 0.44
CYSTM1-201ENST00000261811 DSPP15924 2871 aaKnown RBP17.8■□□□□ 0.44
CYSTM1-201ENST00000261811 G3V2L1 256 aa17.79■□□□□ 0.44
CYSTM1-201ENST00000261811 OR7A17O14581 309 aa17.79■□□□□ 0.44
CYSTM1-201ENST00000261811 PRAMEF4O60810 478 aa17.79■□□□□ 0.44
CYSTM1-201ENST00000261811 SPAG7O75391 227 aa17.79■□□□□ 0.44
CYSTM1-201ENST00000261811 IGHEP01854 428 aa17.79■□□□□ 0.44
CYSTM1-201ENST00000261811 CAPN1P07384 714 aa17.79■□□□□ 0.44
CYSTM1-201ENST00000261811 ZNF888P0CJ79 500 aaPredicted RBP17.79■□□□□ 0.44
CYSTM1-201ENST00000261811 IL1RNP18510 177 aa17.79■□□□□ 0.44
CYSTM1-201ENST00000261811 CD22P20273 847 aa17.79■□□□□ 0.44
CYSTM1-201ENST00000261811 DNAJB13P59910 316 aa17.79■□□□□ 0.44
CYSTM1-201ENST00000261811 ERV3-1Q14264 604 aa17.79■□□□□ 0.44
CYSTM1-201ENST00000261811 SSPNQ14714 243 aa17.79■□□□□ 0.44
CYSTM1-201ENST00000261811 CPSF6Q16630 551 aaKnown RBP eCLIP17.79■□□□□ 0.44
CYSTM1-201ENST00000261811 TMEM35AQ53FP2 167 aa17.79■□□□□ 0.44
CYSTM1-201ENST00000261811 PRAMEF9Q5VWM5 478 aa17.79■□□□□ 0.44
CYSTM1-201ENST00000261811 HOMEZQ8IX15 550 aa17.79■□□□□ 0.44
CYSTM1-201ENST00000261811 ARHGEF39Q8N4T4 335 aa17.79■□□□□ 0.44
CYSTM1-201ENST00000261811 ARMC2Q8NEN0 867 aa17.79■□□□□ 0.44
CYSTM1-201ENST00000261811 OR9A4Q8NGU2 314 aa17.79■□□□□ 0.44
CYSTM1-201ENST00000261811 OR2Y1Q8NGV0 311 aa17.79■□□□□ 0.44
CYSTM1-201ENST00000261811 MOCOSQ96EN8 888 aa17.79■□□□□ 0.44
CYSTM1-201ENST00000261811 CMTM7Q96FZ5 175 aa17.79■□□□□ 0.44
CYSTM1-201ENST00000261811 TMEM237Q96Q45 408 aa17.79■□□□□ 0.44
CYSTM1-201ENST00000261811 ROGDIQ9GZN7 287 aa17.79■□□□□ 0.44
CYSTM1-201ENST00000261811 REXO4Q9GZR2 422 aaKnown RBP17.79■□□□□ 0.44
CYSTM1-201ENST00000261811 PRORYQ9H606 182 aa17.79■□□□□ 0.44
CYSTM1-201ENST00000261811 OXSMQ9NWU1 459 aa17.79■□□□□ 0.44
CYSTM1-201ENST00000261811 NAALAD2Q9Y3Q0 740 aa17.79■□□□□ 0.44
CYSTM1-201ENST00000261811 MRPS18BQ9Y676 258 aaKnown RBP17.79■□□□□ 0.44
CYSTM1-201ENST00000261811 LRIT2A6NDA9 550 aa17.78■□□□□ 0.44
CYSTM1-201ENST00000261811 FOXS1O43638 330 aa17.78■□□□□ 0.44
CYSTM1-201ENST00000261811 KLHL18O94889 574 aa17.78■□□□□ 0.44
CYSTM1-201ENST00000261811 MED26O95402 600 aa17.78■□□□□ 0.44
CYSTM1-201ENST00000261811 IL10P22301 178 aa17.78■□□□□ 0.44
CYSTM1-201ENST00000261811 CDC20Q12834 499 aa17.78■□□□□ 0.44
CYSTM1-201ENST00000261811 IFT88Q13099 833 aa17.78■□□□□ 0.44
CYSTM1-201ENST00000261811 NKG7Q16617 165 aa17.78■□□□□ 0.44
CYSTM1-201ENST00000261811 UGT8Q16880 541 aa17.78■□□□□ 0.44
CYSTM1-201ENST00000261811 GGTA1PQ4G0N0 100 aa17.78■□□□□ 0.44
CYSTM1-201ENST00000261811 LIPMQ5VYY2 423 aa17.78■□□□□ 0.44
CYSTM1-201ENST00000261811 HDXQ7Z353 690 aa17.78■□□□□ 0.44
CYSTM1-201ENST00000261811 OR2L5Q8NG80 312 aa17.78■□□□□ 0.44
CYSTM1-201ENST00000261811 OR52B6Q8NGF0 335 aa17.78■□□□□ 0.44
CYSTM1-201ENST00000261811 TCP10LQ8TDR4 215 aa17.78■□□□□ 0.44
CYSTM1-201ENST00000261811 UTP15Q8TED0 518 aaKnown RBP17.78■□□□□ 0.44
CYSTM1-201ENST00000261811 TRPC4APQ8TEL6 797 aa17.78■□□□□ 0.44
CYSTM1-201ENST00000261811 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.78■□□□□ 0.44
CYSTM1-201ENST00000261811 THAP4Q8WY91 577 aa17.78■□□□□ 0.44
CYSTM1-201ENST00000261811 NACC2Q96BF6 587 aa17.78■□□□□ 0.44
CYSTM1-201ENST00000261811 NSUN5Q96P11 429 aaKnown RBP17.78■□□□□ 0.44
CYSTM1-201ENST00000261811 FAM111AQ96PZ2 611 aa17.78■□□□□ 0.44
CYSTM1-201ENST00000261811 COPS7BQ9H9Q2 264 aaPredicted RBP17.78■□□□□ 0.44
CYSTM1-201ENST00000261811 SNX6Q9UNH7 406 aa17.78■□□□□ 0.44
CYSTM1-201ENST00000261811 RNF11Q9Y3C5 154 aa17.78■□□□□ 0.44
CYSTM1-201ENST00000261811 CDC14CA4D256 554 aa17.77■□□□□ 0.44
CYSTM1-201ENST00000261811 ERI3O43414 337 aaKnown RBP17.77■□□□□ 0.44
CYSTM1-201ENST00000261811 GALR3O60755 368 aaPredicted RBP17.77■□□□□ 0.44
CYSTM1-201ENST00000261811 PRKAR1AP10644 381 aa17.77■□□□□ 0.44
CYSTM1-201ENST00000261811 PTX3P26022 381 aaPredicted RBP17.77■□□□□ 0.44
CYSTM1-201ENST00000261811 CDH13P55290 713 aa17.77■□□□□ 0.44
CYSTM1-201ENST00000261811 PKNOX1P55347 436 aa17.77■□□□□ 0.44
CYSTM1-201ENST00000261811 RPS18P62269 152 aaKnown RBP17.77■□□□□ 0.44
CYSTM1-201ENST00000261811 RHDQ02161 417 aa17.77■□□□□ 0.44
CYSTM1-201ENST00000261811 LCP2Q13094 533 aa17.77■□□□□ 0.44
CYSTM1-201ENST00000261811 DDX39BQ13838 428 aaKnown RBP17.77■□□□□ 0.44
CYSTM1-201ENST00000261811 ZRSR2Q15696 482 aaKnown RBP17.77■□□□□ 0.44
CYSTM1-201ENST00000261811 DEFB134Q4QY38 66 aa17.77■□□□□ 0.44
CYSTM1-201ENST00000261811 UNC50Q53HI1 259 aa17.77■□□□□ 0.44
CYSTM1-201ENST00000261811 AFAP1L2Q8N4X5 818 aa17.77■□□□□ 0.44
CYSTM1-201ENST00000261811 GOLGA6L1Q8N7Z2 621 aa17.77■□□□□ 0.44
CYSTM1-201ENST00000261811 OR4F6Q8NGB9 312 aa17.77■□□□□ 0.44
CYSTM1-201ENST00000261811 STT3BQ8TCJ2 826 aa17.77■□□□□ 0.44
CYSTM1-201ENST00000261811 ZNF473Q8WTR7 871 aaKnown RBP17.77■□□□□ 0.44
CYSTM1-201ENST00000261811 ZNF382Q96SR6 550 aa17.77■□□□□ 0.44
CYSTM1-201ENST00000261811 TGIF2Q9GZN2 237 aa17.77■□□□□ 0.44
CYSTM1-201ENST00000261811 ELOVL6Q9H5J4 265 aa17.77■□□□□ 0.44
CYSTM1-201ENST00000261811 ZBTB26Q9HCK0 441 aa17.77■□□□□ 0.44
CYSTM1-201ENST00000261811 SEMA3GQ9NS98 782 aa17.77■□□□□ 0.44
CYSTM1-201ENST00000261811 SLC22A11Q9NSA0 550 aa17.77■□□□□ 0.44
CYSTM1-201ENST00000261811 PSD3Q9NYI0 1048 aa17.77■□□□□ 0.44
CYSTM1-201ENST00000261811 TRPS1Q9UHF7 1281 aa17.77■□□□□ 0.44
CYSTM1-201ENST00000261811 POLHQ9Y253 713 aa17.77■□□□□ 0.44
CYSTM1-201ENST00000261811 MRPS2Q9Y399 296 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms