RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 ACMSDQ8TDX5 336 aa15.97■□□□□ 0.15
SDCBP-201ENST00000260130 SCYL1Q96KG9 808 aa15.97■□□□□ 0.15
SDCBP-201ENST00000260130 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.97■□□□□ 0.15
SDCBP-201ENST00000260130 GPRC5BQ9NZH0 403 aa15.97■□□□□ 0.15
SDCBP-201ENST00000260130 NDOR1Q9UHB4 597 aa15.97■□□□□ 0.15
SDCBP-201ENST00000260130 RUVBL1Q9Y265 456 aaKnown RBP15.97■□□□□ 0.15
SDCBP-201ENST00000260130 DSCR3O14972 297 aa15.97■□□□□ 0.15
SDCBP-201ENST00000260130 CCNT2O60583 730 aaKnown RBP15.97■□□□□ 0.15
SDCBP-201ENST00000260130 KATNA1O75449 491 aa15.97■□□□□ 0.15
SDCBP-201ENST00000260130 GFAPP14136 432 aa15.97■□□□□ 0.15
SDCBP-201ENST00000260130 RPS15P62841 145 aaKnown RBP15.97■□□□□ 0.15
SDCBP-201ENST00000260130 HKDC1Q2TB90 917 aa15.97■□□□□ 0.15
SDCBP-201ENST00000260130 VN1R4Q7Z5H5 301 aa15.97■□□□□ 0.15
SDCBP-201ENST00000260130 TBC1D19Q8N5T2 526 aa15.97■□□□□ 0.15
SDCBP-201ENST00000260130 SPDL1Q96EA4 605 aa15.97■□□□□ 0.15
SDCBP-201ENST00000260130 FAM117AQ9C073 453 aa15.97■□□□□ 0.15
SDCBP-201ENST00000260130 MRPS18BQ9Y676 258 aaKnown RBP15.97■□□□□ 0.15
SDCBP-201ENST00000260130 LOC400499M0QZD8 3231 aa15.96■□□□□ 0.15
SDCBP-201ENST00000260130 TRBC2A0A5B9 178 aa15.96■□□□□ 0.15
SDCBP-201ENST00000260130 KLK8O60259 260 aa15.96■□□□□ 0.15
SDCBP-201ENST00000260130 CAPN1P07384 714 aa15.96■□□□□ 0.15
SDCBP-201ENST00000260130 MYL2P10916 166 aa15.96■□□□□ 0.15
SDCBP-201ENST00000260130 BCL6P41182 706 aa15.96■□□□□ 0.15
SDCBP-201ENST00000260130 AGTR2P50052 363 aa15.96■□□□□ 0.15
SDCBP-201ENST00000260130 ZRSR2Q15696 482 aaKnown RBP15.96■□□□□ 0.15
SDCBP-201ENST00000260130 PFKFB4Q16877 469 aa15.96■□□□□ 0.15
SDCBP-201ENST00000260130 MUM1Q2TAK8 710 aa15.96■□□□□ 0.15
SDCBP-201ENST00000260130 SLCO4C1Q6ZQN7 724 aa15.96■□□□□ 0.15
SDCBP-201ENST00000260130 LRRC70Q7Z2Q7 622 aa15.96■□□□□ 0.15
SDCBP-201ENST00000260130 GPR155Q7Z3F1 870 aa15.96■□□□□ 0.15
SDCBP-201ENST00000260130 MFSD9Q8NBP5 474 aa15.96■□□□□ 0.15
SDCBP-201ENST00000260130 ZNF740Q8NDX6 193 aa15.96■□□□□ 0.15
SDCBP-201ENST00000260130 UBTD2Q8WUN7 234 aa15.96■□□□□ 0.15
SDCBP-201ENST00000260130 DNAJC9Q8WXX5 260 aa15.96■□□□□ 0.15
SDCBP-201ENST00000260130 C7orf26Q96N11 449 aa15.96■□□□□ 0.15
SDCBP-201ENST00000260130 C17orf62Q9BQA9 187 aa15.96■□□□□ 0.15
SDCBP-201ENST00000260130 MRPL57Q9BQC6 102 aaKnown RBP15.96■□□□□ 0.15
SDCBP-201ENST00000260130 AIF1LQ9BQI0 150 aa15.96■□□□□ 0.15
SDCBP-201ENST00000260130 NLNQ9BYT8 704 aa15.96■□□□□ 0.15
SDCBP-201ENST00000260130 MKS1Q9NXB0 559 aa15.96■□□□□ 0.15
SDCBP-201ENST00000260130 XPR1Q9UBH6 696 aa15.96■□□□□ 0.15
SDCBP-201ENST00000260130 FARSAQ9Y285 508 aaKnown RBP15.96■□□□□ 0.15
SDCBP-201ENST00000260130 ASB1Q9Y576 335 aa15.96■□□□□ 0.15
SDCBP-201ENST00000260130 OR1F1O43749 312 aa15.96■□□□□ 0.14
SDCBP-201ENST00000260130 RAB40ALP0C0E4 278 aa15.96■□□□□ 0.14
SDCBP-201ENST00000260130 C1GALT1C1LP0DN25 315 aa15.96■□□□□ 0.14
SDCBP-201ENST00000260130 VHLP40337 213 aa15.96■□□□□ 0.14
SDCBP-201ENST00000260130 ALDH18A1P54886 795 aaKnown RBP15.96■□□□□ 0.14
SDCBP-201ENST00000260130 MRPS35P82673 323 aaKnown RBP15.96■□□□□ 0.14
SDCBP-201ENST00000260130 NKAIN1Q4KMZ8 207 aa15.96■□□□□ 0.14
SDCBP-201ENST00000260130 GARNL3Q5VVW2 1013 aa15.96■□□□□ 0.14
SDCBP-201ENST00000260130 LCA5Q86VQ0 697 aa15.96■□□□□ 0.14
SDCBP-201ENST00000260130 SNX31Q8N9S9 440 aa15.96■□□□□ 0.14
SDCBP-201ENST00000260130 CAMKVQ8NCB2 501 aa15.96■□□□□ 0.14
SDCBP-201ENST00000260130 STARD8Q92502 1023 aa15.96■□□□□ 0.14
SDCBP-201ENST00000260130 TM4SF19Q96DZ7 209 aa15.96■□□□□ 0.14
SDCBP-201ENST00000260130 C10orf90Q96M02 699 aa15.96■□□□□ 0.14
SDCBP-201ENST00000260130 SPNS1Q9H2V7 528 aa15.96■□□□□ 0.14
SDCBP-201ENST00000260130 CPSF2Q9P2I0 782 aaKnown RBP15.96■□□□□ 0.14
SDCBP-201ENST00000260130 OPTCQ9UBM4 332 aa15.96■□□□□ 0.14
SDCBP-201ENST00000260130 PLLPQ9Y342 182 aa15.96■□□□□ 0.14
SDCBP-201ENST00000260130 PTPRQQ9UMZ3 2332 aa15.95■□□□□ 0.14
SDCBP-201ENST00000260130 HEATR5BQ9P2D3 2071 aa15.95■□□□□ 0.14
SDCBP-201ENST00000260130 ZNF891A8MT65 544 aaPredicted RBP15.95■□□□□ 0.14
SDCBP-201ENST00000260130 C9J4A7 227 aa15.95■□□□□ 0.14
SDCBP-201ENST00000260130 K7EPI3 171 aa15.95■□□□□ 0.14
SDCBP-201ENST00000260130 FCHO1O14526 889 aa15.95■□□□□ 0.14
SDCBP-201ENST00000260130 CLGNO14967 610 aa15.95■□□□□ 0.14
SDCBP-201ENST00000260130 P2RX6O15547 441 aa15.95■□□□□ 0.14
SDCBP-201ENST00000260130 H2AFYO75367 372 aaKnown RBP15.95■□□□□ 0.14
SDCBP-201ENST00000260130 MED26O95402 600 aa15.95■□□□□ 0.14
SDCBP-201ENST00000260130 VARSP26640 1264 aaKnown RBP15.95■□□□□ 0.14
SDCBP-201ENST00000260130 REEP5Q00765 189 aa15.95■□□□□ 0.14
SDCBP-201ENST00000260130 ATG9BQ674R7 924 aa15.95■□□□□ 0.14
SDCBP-201ENST00000260130 FAM198BQ6UWH4 519 aa15.95■□□□□ 0.14
SDCBP-201ENST00000260130 ASPGQ86U10 573 aa15.95■□□□□ 0.14
SDCBP-201ENST00000260130 RAB3IL1Q8TBN0 382 aa15.95■□□□□ 0.14
SDCBP-201ENST00000260130 SLC13A3Q8WWT9 602 aa15.95■□□□□ 0.14
SDCBP-201ENST00000260130 MRPL46Q9H2W6 279 aaKnown RBP15.95■□□□□ 0.14
SDCBP-201ENST00000260130 ACTL8Q9H568 366 aa15.95■□□□□ 0.14
SDCBP-201ENST00000260130 IFT80Q9P2H3 777 aaPredicted RBP15.95■□□□□ 0.14
SDCBP-201ENST00000260130 A6NHS1 94 aa15.94■□□□□ 0.14
SDCBP-201ENST00000260130 ONECUT2O95948 504 aa15.94■□□□□ 0.14
SDCBP-201ENST00000260130 STATHP02808 62 aa15.94■□□□□ 0.14
SDCBP-201ENST00000260130 CXCR2P25025 360 aa15.94■□□□□ 0.14
SDCBP-201ENST00000260130 CACNA1BQ00975 2339 aa15.94■□□□□ 0.14
SDCBP-201ENST00000260130 MC1RQ01726 317 aa15.94■□□□□ 0.14
SDCBP-201ENST00000260130 NCF4Q15080 339 aa15.94■□□□□ 0.14
SDCBP-201ENST00000260130 MLIPQ5VWP3 458 aa15.94■□□□□ 0.14
SDCBP-201ENST00000260130 ARHGEF39Q8N4T4 335 aa15.94■□□□□ 0.14
SDCBP-201ENST00000260130 STMN2Q93045 179 aa15.94■□□□□ 0.14
SDCBP-201ENST00000260130 MACROD1Q9BQ69 325 aa15.94■□□□□ 0.14
SDCBP-201ENST00000260130 EHD1Q9H4M9 534 aa15.94■□□□□ 0.14
SDCBP-201ENST00000260130 TAS2R1Q9NYW7 299 aa15.94■□□□□ 0.14
SDCBP-201ENST00000260130 GPN3Q9UHW5 284 aaPredicted RBP15.94■□□□□ 0.14
SDCBP-201ENST00000260130 TMCO1Q9UM00 188 aa15.94■□□□□ 0.14
SDCBP-201ENST00000260130 NBEAQ8NFP9 2946 aa15.94■□□□□ 0.14
SDCBP-201ENST00000260130 TK2O00142 265 aa15.94■□□□□ 0.14
SDCBP-201ENST00000260130 NKX2-8O15522 239 aa15.94■□□□□ 0.14
SDCBP-201ENST00000260130 CREG1O75629 220 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms