RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 ZNF655Q8N720 491 aaPredicted RBP15.05■□□□□ -0
CCDC90B-201ENST00000260054 MS4A6EQ96DS6 147 aa15.05■□□□□ -0
CCDC90B-201ENST00000260054 SERPINI1Q99574 410 aa15.05■□□□□ -0
CCDC90B-201ENST00000260054 CCT7Q99832 543 aa15.05■□□□□ -0
CCDC90B-201ENST00000260054 EBF4Q9BQW3 602 aa15.05■□□□□ -0
CCDC90B-201ENST00000260054 MRPL1Q9BYD6 325 aaKnown RBP15.05■□□□□ -0
CCDC90B-201ENST00000260054 EPN3Q9H201 632 aa15.05■□□□□ -0
CCDC90B-201ENST00000260054 KCNK13Q9HB14 408 aa15.05■□□□□ -0
CCDC90B-201ENST00000260054 AKAP7Q9P0M2 348 aaPredicted RBP15.05■□□□□ -0
CCDC90B-201ENST00000260054 VPS29Q9UBQ0 182 aa15.05■□□□□ -0
CCDC90B-201ENST00000260054 SERTAD3Q9UJW9 196 aa15.05■□□□□ -0
CCDC90B-201ENST00000260054 GOLGA8QA0A0J9YX86 632 aa15.04■□□□□ -0
CCDC90B-201ENST00000260054 FITM1A5D6W6 292 aa15.04■□□□□ -0
CCDC90B-201ENST00000260054 GOLGA8OA6NCC3 632 aa15.04■□□□□ -0
CCDC90B-201ENST00000260054 GOLGA8NF8WBI6 632 aa15.04■□□□□ -0
CCDC90B-201ENST00000260054 LSM1O15116 133 aaKnown RBP15.04■□□□□ -0
CCDC90B-201ENST00000260054 ZSCAN9O15535 394 aaPredicted RBP15.04■□□□□ -0
CCDC90B-201ENST00000260054 RGS14O43566 566 aa15.04■□□□□ -0
CCDC90B-201ENST00000260054 RSL1D1O76021 490 aaKnown RBP15.04■□□□□ -0
CCDC90B-201ENST00000260054 MED26O95402 600 aa15.04■□□□□ -0
CCDC90B-201ENST00000260054 TIAF1O95411 115 aa15.04■□□□□ -0
CCDC90B-201ENST00000260054 TROVE2P10155 538 aaKnown RBP eCLIP15.04■□□□□ -0
CCDC90B-201ENST00000260054 EPHA3P29320 983 aa15.04■□□□□ -0
CCDC90B-201ENST00000260054 IDH3AP50213 366 aa15.04■□□□□ -0
CCDC90B-201ENST00000260054 STXBP1P61764 594 aaKnown RBP15.04■□□□□ -0
CCDC90B-201ENST00000260054 MC2RQ01718 297 aa15.04■□□□□ -0
CCDC90B-201ENST00000260054 TBL3Q12788 808 aaKnown RBP15.04■□□□□ -0
CCDC90B-201ENST00000260054 NR6A1Q15406 480 aa15.04■□□□□ -0
CCDC90B-201ENST00000260054 MANEAQ5SRI9 462 aa15.04■□□□□ -0
CCDC90B-201ENST00000260054 TMEM214Q6NUQ4 689 aaKnown RBP15.04■□□□□ -0
CCDC90B-201ENST00000260054 CHSY3Q70JA7 882 aa15.04■□□□□ -0
CCDC90B-201ENST00000260054 UBE3DQ7Z6J8 389 aa15.04■□□□□ -0
CCDC90B-201ENST00000260054 ZCCHC10Q8TBK6 192 aa15.04■□□□□ -0
CCDC90B-201ENST00000260054 TUBGCP3Q96CW5 907 aa15.04■□□□□ -0
CCDC90B-201ENST00000260054 APIPQ96GX9 242 aa15.04■□□□□ -0
CCDC90B-201ENST00000260054 MAELQ96JY0 434 aaKnown RBP15.04■□□□□ -0
CCDC90B-201ENST00000260054 C10orf90Q96M02 699 aa15.04■□□□□ -0
CCDC90B-201ENST00000260054 CTRCQ99895 268 aa15.04■□□□□ -0
CCDC90B-201ENST00000260054 NLNQ9BYT8 704 aa15.04■□□□□ -0
CCDC90B-201ENST00000260054 PFDN4Q9NQP4 134 aa15.04■□□□□ -0
CCDC90B-201ENST00000260054 RARRES3Q9UL19 164 aa15.04■□□□□ -0
CCDC90B-201ENST00000260054 CCDC187A0A096LP49 1063 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 SRRM3A6NNA2 597 aaPredicted RBP15.03■□□□□ -0
CCDC90B-201ENST00000260054 NPIPB8E9PQR5 432 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 PLPP1O14494 284 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 TXNDC9O14530 226 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 ERI3O43414 337 aaKnown RBP15.03■□□□□ -0
CCDC90B-201ENST00000260054 DIAPH2O60879 1101 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 PEX11AO75192 247 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 B3GALT4O96024 378 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 ZNF888P0CJ79 500 aaPredicted RBP15.03■□□□□ -0
CCDC90B-201ENST00000260054 PRPH2P23942 346 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 ETV5P41161 510 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 GCGRP47871 477 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 PLA2G16P53816 162 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 RAB8AP61006 207 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 GRM7Q14831 915 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 TMEM35AQ53FP2 167 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 SPDYAQ5MJ70 313 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 CPLX4Q7Z7G2 160 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 GPR135Q8IZ08 494 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 DTWD1Q8N5C7 304 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 OR2L5Q8NG80 312 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 UTP15Q8TED0 518 aaKnown RBP15.03■□□□□ -0
CCDC90B-201ENST00000260054 PMEPA1Q969W9 287 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 ZNF717Q9BY31 904 aaPredicted RBP15.03■□□□□ -0
CCDC90B-201ENST00000260054 AKTIPQ9H8T0 292 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 LHX9Q9NQ69 397 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 FBXO8Q9NRD0 319 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 RIC8BQ9NVN3 520 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 A0A0G2JN53 185 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 A0A0G2JND7 137 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 HYKKA2RU49 373 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 B4E171 279 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 RTCAO00442 366 aaKnown RBP15.03■□□□□ -0
CCDC90B-201ENST00000260054 PLD2O14939 933 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 POLR1CO15160 346 aaPredicted RBP15.03■□□□□ -0
CCDC90B-201ENST00000260054 SEMA3DO95025 777 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 PRR35P0CG20 571 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 SMIM10L1P0DMW3 83 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 FGF5P12034 268 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 TSPAN7P41732 249 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 EIF3IQ13347 325 aaKnown RBP15.03■□□□□ -0
CCDC90B-201ENST00000260054 IL11RAQ14626 422 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 KIAA0040Q15053 153 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 C3orf38Q5JPI3 329 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 TLDC1Q6P9B6 456 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 ABHD17CQ6PCB6 329 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 LARP4Q71RC2 724 aaKnown RBP eCLIP15.03■□□□□ -0
CCDC90B-201ENST00000260054 TMPRSS7Q7RTY8 843 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 PRSS41Q7RTY9 318 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 PPP1R3BQ86XI6 285 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 OR8K5Q8NH50 307 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 CHTF18Q8WVB6 975 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 GAL3ST3Q96A11 431 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 RNF31Q96EP0 1072 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 SMIM10Q96HG1 83 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 OR52B2Q96RD2 323 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 ELAC2Q9BQ52 826 aaKnown RBP15.03■□□□□ -0
CCDC90B-201ENST00000260054 C17orf62Q9BQA9 187 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms