RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 FCRL3Q96P31 734 aaPredicted RBP7.49□□□□□ -1.21
GPNMB-201ENST00000258733 NEDD4LQ96PU5 975 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 ZSWIM1Q9BR11 485 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 TTLL2Q9BWV7 592 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 ALG2Q9H553 416 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 PRM3Q9NNZ6 103 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 SEC31BQ9NQW1 1179 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 FOXD3Q9UJU5 478 aaPredicted RBP7.49□□□□□ -1.21
GPNMB-201ENST00000258733 SLC9A8Q9Y2E8 581 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 DENND4AQ7Z401 1863 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 METP08581 1390 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 A0A1W2PQJ5 194 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 AGAP5A6NIR3 686 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 NPIPA2E9PIF3 369 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 MID1O15344 667 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 NRP2O60462 931 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 PLIN3O60664 434 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 ITGA10O75578 1167 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 LIPFP07098 398 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 ME2P23368 584 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 PTPREP23469 700 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 APOBEC3AP31941 199 aaPredicted RBP7.48□□□□□ -1.21
GPNMB-201ENST00000258733 FOXO4P98177 505 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 TFAMQ00059 246 aaKnown RBP7.48□□□□□ -1.21
GPNMB-201ENST00000258733 SP3Q02447 781 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 PTPN12Q05209 780 aaKnown RBP7.48□□□□□ -1.21
GPNMB-201ENST00000258733 CDNFQ49AH0 187 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 BEX5Q5H9J7 111 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 OTUD1Q5VV17 481 aaPredicted RBP7.48□□□□□ -1.21
GPNMB-201ENST00000258733 CHST15Q7LFX5 561 aaPredicted RBP7.48□□□□□ -1.21
GPNMB-201ENST00000258733 FAM35AQ86V20 835 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 CDAN1Q8IWY9 1227 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 DEFB107AQ8IZN7 70 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 GPR137CQ8N3F9 429 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 EIF4E3Q8N5X7 224 aaKnown RBP7.48□□□□□ -1.21
GPNMB-201ENST00000258733 CDYL2Q8N8U2 506 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 L3MBTL4Q8NA19 623 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 OR56A3Q8NH54 315 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 ZFYVE21Q9BQ24 234 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 MGME1Q9BQP7 344 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 UGT2B28Q9BY64 529 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 YTHDF1Q9BYJ9 559 aaKnown RBP7.48□□□□□ -1.21
GPNMB-201ENST00000258733 NKX6-2Q9C056 277 aaPredicted RBP7.48□□□□□ -1.21
GPNMB-201ENST00000258733 MCOLN1Q9GZU1 580 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 NUAK2Q9H093 628 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 CLEC4MQ9H2X3 399 aaPredicted RBP7.48□□□□□ -1.21
GPNMB-201ENST00000258733 TRABDQ9H4I3 376 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 RNF146Q9NTX7 359 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 RAB20Q9NX57 234 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 DUS2Q9NX74 493 aaKnown RBP7.48□□□□□ -1.21
GPNMB-201ENST00000258733 APOBEC3BQ9UH17 382 aaKnown RBP7.48□□□□□ -1.21
GPNMB-201ENST00000258733 FBXL2Q9UKC9 423 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 COL22A1Q8NFW1 1626 aaPredicted RBP7.48□□□□□ -1.21
GPNMB-201ENST00000258733 FAM170BA6NMN3 283 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 TMEM189-UBE2V1I3L0A0 370 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 QSOX1O00391 747 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 TPP1O14773 563 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 MMP20O60882 483 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 MED26O95402 600 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 CETPP11597 493 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 FGFR3P22607 806 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 KLRC1P26715 233 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 GIFP27352 417 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 GGT5P36269 586 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 TSPAN31Q12999 210 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 IL24Q13007 206 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 IL18R1Q13478 541 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 TMED2Q15363 201 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 TATDN3Q17R31 274 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 COL13A1Q5TAT6 717 aaPredicted RBP7.48□□□□□ -1.21
GPNMB-201ENST00000258733 DENND5AQ6IQ26 1287 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 UNQ6494/PRO21346Q6UXR6 183 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 PTAR1Q7Z6K3 402 aaPredicted RBP7.48□□□□□ -1.21
GPNMB-201ENST00000258733 CATSPERDQ86XM0 798 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 TMEM199Q8N511 208 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 OR5T3Q8NGG3 340 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 SLC35G2Q8TBE7 412 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 MRGPRDQ8TDS7 321 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 FAR1Q8WVX9 515 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 TRMT61AQ96FX7 289 aaKnown RBP7.48□□□□□ -1.21
GPNMB-201ENST00000258733 PIWIL1Q96J94 861 aaKnown RBP7.48□□□□□ -1.21
GPNMB-201ENST00000258733 LRR1Q96L50 414 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 ZNF385DQ9H6B1 395 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 HEXA-AS1Q9H8Q6 139 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 ABCB9Q9NP78 766 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 MED9Q9NWA0 146 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 NSMCE4AQ9NXX6 385 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 ITGA11Q9UKX5 1188 aa7.48□□□□□ -1.21
GPNMB-201ENST00000258733 PGPEP1LA6NFU8 196 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 LGALS8O00214 317 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 NKRFO15226 690 aaKnown RBP eCLIP7.47□□□□□ -1.21
GPNMB-201ENST00000258733 INSIG1O15503 277 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 GLRA3O75311 464 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 SNRPB2P08579 225 aaKnown RBP7.47□□□□□ -1.21
GPNMB-201ENST00000258733 ANXA5P08758 320 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 AOC1P19801 751 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 CYP7A1P22680 504 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 NR2F2P24468 414 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 HTR1BP28222 390 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 RPL21P46778 160 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms