RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 CBSP35520 551 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 MASP1P48740 699 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 UGT2B15P54855 530 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 SLC35A2P78381 396 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 TARDBPQ13148 414 aaKnown RBP eCLIP4.57□□□□□ -1.68
USP44-201ENST00000258499 CTF1Q16619 201 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 UGT8Q16880 541 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 ZFP69Q49AA0 526 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 TJAP1Q5JTD0 557 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 CATSPEREQ5SY80 951 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 TRIQKQ629K1 86 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 DESI1Q6ICB0 168 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 CEACAM20Q6UY09 585 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 USP30Q70CQ3 517 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 SPATC1Q76KD6 591 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 TRIM46Q7Z4K8 759 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 ZSWIM9Q86XI8 627 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 CIDECQ96AQ7 238 aaPredicted RBP4.57□□□□□ -1.68
USP44-201ENST00000258499 ART5Q96L15 291 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 BBS4Q96RK4 519 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 CCM2Q9BSQ5 444 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 SLC12A9Q9BXP2 914 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 MMP27Q9H306 513 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 EHD1Q9H4M9 534 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 SLC52A3Q9NQ40 469 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 EQTNQ9NQ60 294 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 AHSPQ9NZD4 102 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 H2AFY2Q9P0M6 372 aaPredicted RBP4.57□□□□□ -1.68
USP44-201ENST00000258499 C5AR2Q9P296 337 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 ENOPH1Q9UHY7 261 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 SSR3Q9UNL2 185 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 POFUT2Q9Y2G5 429 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 LYVE1Q9Y5Y7 322 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 MYO10Q9HD67 2058 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 FAM25AB3EWG3 89 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 FAM25CB3EWG5 89 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 FAM25GB3EWG6 89 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 FAM227AF5H4B4 570 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 CTDSP2O14595 271 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 SLC16A6O15403 523 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 SOCS5O75159 536 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 RFPL2O75678 378 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 SULT1C4O75897 302 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 ALPPL2P10696 532 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 MAPK12P53778 367 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 RGNQ15493 299 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 KCNJ8Q15842 424 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 DCST1Q5T197 706 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 ATAD3BQ5T9A4 648 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 ZNF57Q68EA5 555 aaPredicted RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 GTF2IRD2BQ6EKJ0 949 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 GDPD4Q6W3E5 623 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 GTF2IRD2Q86UP8 949 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 TRIM48Q8IWZ4 208 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 TCEANCQ8N8B7 351 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 C7orf57Q8NEG2 295 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 FAM83FQ8NEG4 500 aaPredicted RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 OR7G3Q8NG95 312 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 COL26A1Q96A83 441 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 SCRN2Q96FV2 425 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 IGSF21Q96ID5 467 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 CEP295NLQ96MC4 621 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 CASD1Q96PB1 797 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 IL17FQ96PD4 163 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 DOK1Q99704 481 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 FNDC11Q9BVV2 318 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 MROQ9BYG7 248 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 POLR2J3Q9H1A7 115 aaKnown RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 IL37Q9NZH6 218 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 TMEFF2Q9UIK5 374 aaPredicted RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 CFL2Q9Y281 166 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 INSL5Q9Y5Q6 135 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 NUMA1Q14980 2115 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 KIAA0100Q14667 2235 aaKnown RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 CCDC182A6NF36 153 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 UNCXA6NJT0 531 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 TMEM88BA6NKF7 163 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 CLCA1A8K7I4 914 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 ARHGEF33A8MVX0 844 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 H3BNC9 293 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 H7C0S8 307 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 TLX2O43763 284 aaPredicted RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 NME6O75414 186 aaPredicted RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 LEFTY1O75610 366 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 PCDH8O95206 1070 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 PTHP01270 115 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 INHAP05111 366 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 C8AP07357 584 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 PABPC1P11940 636 aaKnown RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 SRCP12931 536 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 RPS3P23396 243 aaKnown RBP eCLIP4.56□□□□□ -1.68
USP44-201ENST00000258499 CNR2P34972 360 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 PTGER1P34995 402 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 ZFP36L2P47974 494 aaKnown RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 SPINT3P49223 89 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 RAB25P57735 213 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 RPS7P62081 194 aaKnown RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 CSNK2BP67870 215 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 TUBA1BP68363 451 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms