RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 FBXO42Q6P3S6 717 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 BTN2A3PQ96KV6 586 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 MRPL9Q9BYD2 267 aaKnown RBP7.29□□□□□ -1.24
RIF1-201ENST00000243326 RPP38P78345 283 aaKnown RBP7.29□□□□□ -1.24
RIF1-201ENST00000243326 TCEAL5Q5H9L2 206 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 OR9Q2Q8NGE9 314 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 ZDHHC1Q8WTX9 485 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 ST8SIA2Q92186 375 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 FRS3O43559 492 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 B4GALT4O60513 344 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 ATG13O75143 517 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 LYPLA2O95372 231 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 OR12D1P0DN82 309 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 CLCN4P51793 760 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 SPCS2Q15005 226 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 UNC50Q53HI1 259 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 C6orf141Q5SZD1 244 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 HES5Q5TA89 166 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 CEACAM20Q6UY09 585 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 COX18Q8N8Q8 333 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 PYURFQ96I23 114 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 SNX27Q96L92 541 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 NPLQ9BXD5 320 aaPredicted RBP7.29□□□□□ -1.24
RIF1-201ENST00000243326 IGSF9Q9P2J2 1179 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 DPP7Q9UHL4 492 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 CAPN14A8MX76 684 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 TEX28O15482 410 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 REM1O75628 298 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 ZNF14P17017 642 aaPredicted RBP7.29□□□□□ -1.24
RIF1-201ENST00000243326 WNT7BP56706 349 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 ZNF829Q3KNS6 432 aaPredicted RBP7.29□□□□□ -1.24
RIF1-201ENST00000243326 ZNF789Q5FWF6 425 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 ZNF678Q5SXM1 525 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 MAELQ96JY0 434 aaKnown RBP7.29□□□□□ -1.24
RIF1-201ENST00000243326 LTN1O94822 1766 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 ANKRD26Q9UPS8 1709 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 ARL5CA6NH57 179 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 RFPL2O75678 378 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 OR2B3O76000 313 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 M6PRP20645 277 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 FOXA1P55317 472 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 SULT2A1Q06520 285 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 CCDC71Q8IV32 467 aaPredicted RBP7.28□□□□□ -1.24
RIF1-201ENST00000243326 BCL7BQ9BQE9 202 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 ALKBH4Q9NXW9 302 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 TAS2R16Q9NYV7 291 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 ATRNL1Q5VV63 1379 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 SPATA31D1Q6ZQQ2 1576 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 MAP2K3P46734 347 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 LRRN1Q6UXK5 716 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 C11orf98E9PRG8 122 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 WRBO00258 174 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 NME4O00746 187 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 XKRYO14609 159 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 CBR1P16152 277 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 GJA5P36382 358 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 DSTNP60981 165 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 ADAM15Q13444 863 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 JAGN1Q8N5M9 183 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 ATG5Q9H1Y0 275 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 OR51E2Q9H255 320 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 TUBB1Q9H4B7 451 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 MGAT4AQ9UM21 535 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 PPP6CO00743 305 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 TXNL1O43396 289 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 SPDEFO95238 335 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 SOX3P41225 446 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 PTPRRQ15256 657 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 LYPLAL1Q5VWZ2 237 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 UGT2A3Q6UWM9 527 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 GPRC5BQ9NZH0 403 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 EEF1E1-BLOC1S5C9J1V9 151 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 CTSOP43234 321 aaPredicted RBP7.28□□□□□ -1.24
RIF1-201ENST00000243326 HTR6P50406 440 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 CDK6Q00534 326 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 SQSTM1Q13501 440 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 NCEH1Q6PIU2 408 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 OR51L1Q8NGJ5 315 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 WDR20Q8TBZ3 569 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 CSGALNACT1Q8TDX6 532 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 MIOSQ9NXC5 875 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 MAN2B2Q9Y2E5 1009 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 VILLO15195 856 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 ABHD11Q8NFV4 315 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 STOML3Q8TAV4 291 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 ZFAND2BQ8WV99 257 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 MUC13Q9H3R2 512 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 NUDT15Q9NV35 164 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 SNED1Q8TER0 1413 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 FMN2Q9NZ56 1722 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 ZNF878C9JN71 531 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 MAP3K8P41279 467 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 PDGFRLQ15198 375 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 KLHL22Q53GT1 634 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 CLEC20AQ6ZU45 233 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 SIGLEC10Q96LC7 697 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 ADARB2Q9NS39 739 aaKnown RBP7.28□□□□□ -1.24
RIF1-201ENST00000243326 PRORSD1PA6NEY8 169 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 GINS1Q14691 196 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 CLCA4Q14CN2 919 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms