RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 GALNT1Q10472 559 aaPredicted RBP13.36□□□□□ -0.27
HCFC2-201ENST00000229330 LRP8Q14114 963 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 NTRK2Q16620 822 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 UAP1L1Q3KQV9 507 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 USP41Q3LFD5 358 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 FNDC3BQ53EP0 1204 aaKnown RBP13.36□□□□□ -0.27
HCFC2-201ENST00000229330 PPP1R16AQ96I34 528 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 NPY6RQ99463 290 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 C14orf105Q9NVL8 296 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 FNIP2Q9P278 1114 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 PADI3Q9ULW8 664 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 ELFN1P0C7U0 828 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 OR1E2P47887 323 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 NXPE2Q96DL1 559 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 CCDC120Q96HB5 630 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 ZSWIM3Q96MP5 696 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 FERD3LQ96RJ6 166 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 EXO5Q9H790 373 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 ADAMTSL3P82987 1691 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 OR6C75A6NL08 312 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 B8ZZF3 427 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 GTPBP1O00178 669 aaKnown RBP13.36□□□□□ -0.27
HCFC2-201ENST00000229330 PCDH17O14917 1159 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 RFPL3O75679 317 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 ASGR1P07306 291 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 CLCNKBP51801 687 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 TCEA2Q15560 299 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 PDZD9Q8IXQ8 264 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 TMEM151AQ8N4L1 468 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 ZNF471Q9BX82 626 aaPredicted RBP13.36□□□□□ -0.27
HCFC2-201ENST00000229330 NSUN3Q9H649 340 aaKnown RBP13.36□□□□□ -0.27
HCFC2-201ENST00000229330 OLAHQ9NV23 265 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 KIAA1522Q9P206 1035 aaPredicted RBP13.36□□□□□ -0.27
HCFC2-201ENST00000229330 EMCNQ9ULC0 261 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 ZNF451Q9Y4E5 1061 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 KDM3BQ7LBC6 1761 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 LRP6O75581 1613 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 PRKCGP05129 697 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 IL32P24001 234 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 CORO1AP31146 461 aaKnown RBP13.36□□□□□ -0.27
HCFC2-201ENST00000229330 PROX2Q3B8N5 592 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.36□□□□□ -0.27
HCFC2-201ENST00000229330 CDKL4Q5MAI5 379 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 ADGRG2Q8IZP9 1017 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 LILRA2Q8N149 483 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 TMEM125Q96AQ2 219 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 FIZ1Q96SL8 496 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 NELL2Q99435 816 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 DOHHQ9BU89 302 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 P2RX2Q9UBL9 471 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 RLN2P04090 185 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 SPATA31D3P0C874 917 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 CELP19835 753 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 ACVR2AP27037 513 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 DCTP40126 519 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 GSTM4Q03013 218 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 EMX1Q04741 257 aaPredicted RBP13.36□□□□□ -0.27
HCFC2-201ENST00000229330 EXOC3L2Q2M3D2 409 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 ATAD3CQ5T2N8 411 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 SPATA31D4Q6ZUB0 917 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 TMEM102Q8N9M5 508 aaPredicted RBP13.36□□□□□ -0.27
HCFC2-201ENST00000229330 ZNF248Q8NDW4 579 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 SIMC1Q8NDZ2 872 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 MCCC1Q96RQ3 725 aaPredicted RBP13.36□□□□□ -0.27
HCFC2-201ENST00000229330 GAL3ST1Q99999 423 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 ZNF350Q9GZX5 532 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 PCDHGA8Q9Y5G5 932 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 SETD1AO15047 1707 aaKnown RBP13.35□□□□□ -0.27
HCFC2-201ENST00000229330 FAM170BA6NMN3 283 aa13.35□□□□□ -0.27
HCFC2-201ENST00000229330 J3KR12 359 aa13.35□□□□□ -0.27
HCFC2-201ENST00000229330 CAPN5O15484 640 aaPredicted RBP13.35□□□□□ -0.27
HCFC2-201ENST00000229330 CHP2O43745 196 aa13.35□□□□□ -0.27
HCFC2-201ENST00000229330 BTN2A1Q7KYR7 527 aa13.35□□□□□ -0.27
HCFC2-201ENST00000229330 SIAH1Q8IUQ4 282 aa13.35□□□□□ -0.27
HCFC2-201ENST00000229330 SDR16C5Q8N3Y7 309 aa13.35□□□□□ -0.27
HCFC2-201ENST00000229330 S100PBPQ96BU1 408 aa13.35□□□□□ -0.27
HCFC2-201ENST00000229330 DHRS1Q96LJ7 313 aa13.35□□□□□ -0.27
HCFC2-201ENST00000229330 A0A1B0GVM2 712 aa13.35□□□□□ -0.27
HCFC2-201ENST00000229330 SLC35F4A4IF30 521 aa13.35□□□□□ -0.27
HCFC2-201ENST00000229330 CARNS1A5YM72 827 aa13.35□□□□□ -0.27
HCFC2-201ENST00000229330 J3QLW9 94 aa13.35□□□□□ -0.27
HCFC2-201ENST00000229330 LYRM1O43325 122 aa13.35□□□□□ -0.27
HCFC2-201ENST00000229330 CH25HO95992 272 aa13.35□□□□□ -0.27
HCFC2-201ENST00000229330 ZNF19P17023 458 aa13.35□□□□□ -0.27
HCFC2-201ENST00000229330 AVPR1BP47901 424 aa13.35□□□□□ -0.27
HCFC2-201ENST00000229330 RAB5BP61020 215 aa13.35□□□□□ -0.27
HCFC2-201ENST00000229330 KRTCAP2Q8N6L1 136 aa13.35□□□□□ -0.27
HCFC2-201ENST00000229330 ATP6V1C2Q8NEY4 427 aa13.35□□□□□ -0.27
HCFC2-201ENST00000229330 ARL6Q9H0F7 186 aa13.35□□□□□ -0.27
HCFC2-201ENST00000229330 MGAT4CQ9UBM8 478 aa13.35□□□□□ -0.27
HCFC2-201ENST00000229330 GPN3Q9UHW5 284 aaPredicted RBP13.35□□□□□ -0.27
HCFC2-201ENST00000229330 C2orf92A0A1B0GVN3 265 aa13.35□□□□□ -0.27
HCFC2-201ENST00000229330 SAP18O00422 153 aaKnown RBP13.35□□□□□ -0.27
HCFC2-201ENST00000229330 LDOC1O95751 146 aaPredicted RBP13.35□□□□□ -0.27
HCFC2-201ENST00000229330 AP1S2P56377 157 aa13.35□□□□□ -0.27
HCFC2-201ENST00000229330 KEAP1Q14145 624 aa13.35□□□□□ -0.27
HCFC2-201ENST00000229330 C15orf39Q6ZRI6 1047 aa13.35□□□□□ -0.27
HCFC2-201ENST00000229330 GALNTL5Q7Z4T8 443 aa13.35□□□□□ -0.27
HCFC2-201ENST00000229330 TMC8Q8IU68 726 aa13.35□□□□□ -0.27
HCFC2-201ENST00000229330 CHDHQ8NE62 594 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms