RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 CYP17A1P05093 508 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 FURINP09958 794 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 CD6P30203 668 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 ST13P50502 369 aaKnown RBP21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 MVDP53602 400 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 DPTQ07507 201 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 CAMK2GQ13555 558 aaPredicted RBP21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 ZNF846Q147U1 533 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 IFI44LQ53G44 452 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 ZNF385BQ569K4 471 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 FAM71E1Q6IPT2 247 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 TRIM40Q6P9F5 258 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 UNC5DQ6UXZ4 953 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 SLC15A4Q8N697 577 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 CELF5Q8N6W0 485 aaKnown RBP21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 ZNF540Q8NDQ6 660 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 C16orf78Q8WTQ4 265 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 PPCDCQ96CD2 204 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 VMP1Q96GC9 406 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 ZSWIM3Q96MP5 696 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 TRIM39Q9HCM9 518 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 GPR34Q9UPC5 381 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 PCM1Q15154 2024 aa21.1■□□□□ 0.97
SMARCD2-201ENST00000225742 TMEM229AB2RXF0 380 aa21.1■□□□□ 0.97
SMARCD2-201ENST00000225742 PI15O43692 258 aa21.1■□□□□ 0.97
SMARCD2-201ENST00000225742 GCM2O75603 506 aaPredicted RBP21.1■□□□□ 0.97
SMARCD2-201ENST00000225742 ADH1CP00326 375 aa21.1■□□□□ 0.97
SMARCD2-201ENST00000225742 POU2F2P09086 479 aa21.1■□□□□ 0.97
SMARCD2-201ENST00000225742 ITGA2P17301 1181 aa21.1■□□□□ 0.97
SMARCD2-201ENST00000225742 TEKQ02763 1124 aa21.1■□□□□ 0.97
SMARCD2-201ENST00000225742 POM121L1PQ3SYA9 428 aa21.1■□□□□ 0.97
SMARCD2-201ENST00000225742 ANKDD1AQ495B1 522 aa21.1■□□□□ 0.97
SMARCD2-201ENST00000225742 CATSPEREQ5SY80 951 aa21.1■□□□□ 0.97
SMARCD2-201ENST00000225742 MLIPQ5VWP3 458 aa21.1■□□□□ 0.97
SMARCD2-201ENST00000225742 ARMCX6Q7L4S7 300 aa21.1■□□□□ 0.97
SMARCD2-201ENST00000225742 ZNF554Q86TJ5 538 aa21.1■□□□□ 0.97
SMARCD2-201ENST00000225742 FCGR1BQ92637 280 aa21.1■□□□□ 0.97
SMARCD2-201ENST00000225742 PPP1R16AQ96I34 528 aa21.1■□□□□ 0.97
SMARCD2-201ENST00000225742 SLC35A5Q9BS91 424 aa21.1■□□□□ 0.97
SMARCD2-201ENST00000225742 C11orf49Q9H6J7 331 aa21.1■□□□□ 0.97
SMARCD2-201ENST00000225742 THSD1Q9NS62 852 aa21.1■□□□□ 0.97
SMARCD2-201ENST00000225742 PLCXD1Q9NUJ7 323 aa21.1■□□□□ 0.97
SMARCD2-201ENST00000225742 ITM2BQ9Y287 266 aa21.1■□□□□ 0.97
SMARCD2-201ENST00000225742 ZBBXA8MT70 800 aa21.09■□□□□ 0.97
SMARCD2-201ENST00000225742 TNFRSF11BO00300 401 aa21.09■□□□□ 0.97
SMARCD2-201ENST00000225742 SPINT1O43278 529 aa21.09■□□□□ 0.97
SMARCD2-201ENST00000225742 KRT75O95678 551 aa21.09■□□□□ 0.97
SMARCD2-201ENST00000225742 MT-ND2P03891 347 aa21.09■□□□□ 0.97
SMARCD2-201ENST00000225742 ANXA8P13928 327 aa21.09■□□□□ 0.97
SMARCD2-201ENST00000225742 WEE1P30291 646 aa21.09■□□□□ 0.97
SMARCD2-201ENST00000225742 RRM2P31350 389 aa21.09■□□□□ 0.97
SMARCD2-201ENST00000225742 BMPR1AP36894 532 aa21.09■□□□□ 0.97
SMARCD2-201ENST00000225742 CRATP43155 626 aa21.09■□□□□ 0.97
SMARCD2-201ENST00000225742 GPR1P46091 355 aa21.09■□□□□ 0.97
SMARCD2-201ENST00000225742 ZNF630Q2M218 657 aaPredicted RBP21.09■□□□□ 0.97
SMARCD2-201ENST00000225742 LAIR1Q6GTX8 287 aa21.09■□□□□ 0.97
SMARCD2-201ENST00000225742 TRAPPC5Q8IUR0 188 aa21.09■□□□□ 0.97
SMARCD2-201ENST00000225742 S100ZQ8WXG8 99 aa21.09■□□□□ 0.97
SMARCD2-201ENST00000225742 OR8D1Q8WZ84 308 aa21.09■□□□□ 0.97
SMARCD2-201ENST00000225742 WDR12Q9GZL7 423 aaKnown RBP21.09■□□□□ 0.97
SMARCD2-201ENST00000225742 OR2AG1Q9H205 316 aa21.09■□□□□ 0.97
SMARCD2-201ENST00000225742 CCDC177Q9NQR7 707 aaPredicted RBP21.09■□□□□ 0.97
SMARCD2-201ENST00000225742 NUP214P35658 2090 aaPredicted RBP21.09■□□□□ 0.97
SMARCD2-201ENST00000225742 EDDM13A0A1B0GTR0 161 aa21.08■□□□□ 0.97
SMARCD2-201ENST00000225742 VEGFDO43915 354 aa21.08■□□□□ 0.97
SMARCD2-201ENST00000225742 SH3BGRLO75368 114 aa21.08■□□□□ 0.97
SMARCD2-201ENST00000225742 PAPLNO95428 1278 aa21.08■□□□□ 0.97
SMARCD2-201ENST00000225742 NTRK1P04629 796 aa21.08■□□□□ 0.97
SMARCD2-201ENST00000225742 GRK3P35626 688 aa21.08■□□□□ 0.97
SMARCD2-201ENST00000225742 SERPINB10P48595 397 aa21.08■□□□□ 0.97
SMARCD2-201ENST00000225742 HBA1P69905 142 aa21.08■□□□□ 0.97
SMARCD2-201ENST00000225742 TAP2Q03519 686 aa21.08■□□□□ 0.97
SMARCD2-201ENST00000225742 C2orf80Q0P641 193 aa21.08■□□□□ 0.97
SMARCD2-201ENST00000225742 STARD3Q14849 445 aa21.08■□□□□ 0.97
SMARCD2-201ENST00000225742 CLCA4Q14CN2 919 aa21.08■□□□□ 0.97
SMARCD2-201ENST00000225742 FAM124AQ86V42 546 aa21.08■□□□□ 0.97
SMARCD2-201ENST00000225742 CHPT1Q8WUD6 406 aa21.08■□□□□ 0.97
SMARCD2-201ENST00000225742 SIGLEC11Q96RL6 698 aa21.08■□□□□ 0.97
SMARCD2-201ENST00000225742 EPS8L2Q9H6S3 715 aa21.08■□□□□ 0.97
SMARCD2-201ENST00000225742 ACOT13Q9NPJ3 140 aa21.08■□□□□ 0.97
SMARCD2-201ENST00000225742 NDUFAF4Q9P032 175 aa21.08■□□□□ 0.97
SMARCD2-201ENST00000225742 WBP11Q9Y2W2 641 aaKnown RBP21.08■□□□□ 0.97
SMARCD2-201ENST00000225742 LYVE1Q9Y5Y7 322 aa21.08■□□□□ 0.97
SMARCD2-201ENST00000225742 C6orf47O95873 294 aa21.08■□□□□ 0.96
SMARCD2-201ENST00000225742 MAP2K4P45985 399 aa21.08■□□□□ 0.96
SMARCD2-201ENST00000225742 NTHL1P78549 312 aa21.08■□□□□ 0.96
SMARCD2-201ENST00000225742 SCARB2Q14108 478 aa21.08■□□□□ 0.96
SMARCD2-201ENST00000225742 NR1D2Q14995 579 aa21.08■□□□□ 0.96
SMARCD2-201ENST00000225742 DGUOKQ16854 277 aa21.08■□□□□ 0.96
SMARCD2-201ENST00000225742 TMEM52BQ4KMG9 183 aa21.08■□□□□ 0.96
SMARCD2-201ENST00000225742 LCTLQ6UWM7 567 aa21.08■□□□□ 0.96
SMARCD2-201ENST00000225742 P2RY8Q86VZ1 359 aa21.08■□□□□ 0.96
SMARCD2-201ENST00000225742 OR2L2Q8NH16 312 aa21.08■□□□□ 0.96
SMARCD2-201ENST00000225742 SPPL2AQ8TCT8 520 aa21.08■□□□□ 0.96
SMARCD2-201ENST00000225742 SP7Q8TDD2 431 aaPredicted RBP21.08■□□□□ 0.96
SMARCD2-201ENST00000225742 MAL2Q969L2 176 aa21.08■□□□□ 0.96
SMARCD2-201ENST00000225742 HMG20AQ9NP66 347 aa21.08■□□□□ 0.96
SMARCD2-201ENST00000225742 RHBDL2Q9NX52 303 aa21.08■□□□□ 0.96
SMARCD2-201ENST00000225742 TAS2R9Q9NYW1 312 aa21.08■□□□□ 0.96
SMARCD2-201ENST00000225742 POFUT2Q9Y2G5 429 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms