RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 RPS3P23396 243 aaKnown RBP eCLIP13.81□□□□□ -0.2
SFXN3-201ENST00000224807 GGT2P36268 569 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 IRF8Q02556 426 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 BCL2L1Q07817 233 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 ACSM2AQ08AH3 577 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 PCBP1Q15365 356 aaKnown RBP eCLIP13.81□□□□□ -0.2
SFXN3-201ENST00000224807 TBCEQ15813 527 aaPredicted RBP13.81□□□□□ -0.2
SFXN3-201ENST00000224807 SSX1Q16384 188 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 ZNF284Q2VY69 593 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 PARP15Q460N3 678 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 ACSM2BQ68CK6 577 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 UBE2R2Q712K3 238 aaPredicted RBP13.81□□□□□ -0.2
SFXN3-201ENST00000224807 WDR53Q7Z5U6 358 aaPredicted RBP13.81□□□□□ -0.2
SFXN3-201ENST00000224807 C19orf18Q8NEA5 215 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 ASB15Q8WXK1 588 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 SNX18Q96RF0 628 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 TM9SF2Q99805 663 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 WACQ9BTA9 647 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 TRIM62Q9BVG3 475 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 MAGIXQ9H6Y5 334 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 TRIM45Q9H8W5 580 aaPredicted RBP13.81□□□□□ -0.2
SFXN3-201ENST00000224807 MCUBQ9NWR8 336 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 CRNNQ9UBG3 495 aaPredicted RBP13.81□□□□□ -0.2
SFXN3-201ENST00000224807 PADI3Q9ULW8 664 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 PCDHGB3Q9Y5G1 929 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 CFAP20Q9Y6A4 193 aaKnown RBP13.81□□□□□ -0.2
SFXN3-201ENST00000224807 ARID1BQ8NFD5 2236 aaPredicted RBP13.81□□□□□ -0.2
SFXN3-201ENST00000224807 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.81□□□□□ -0.2
SFXN3-201ENST00000224807 TSPAN4O14817 238 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 NOS1APO75052 506 aaPredicted RBP13.81□□□□□ -0.2
SFXN3-201ENST00000224807 ANXA5P08758 320 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 RPL17P18621 184 aaKnown RBP13.81□□□□□ -0.2
SFXN3-201ENST00000224807 PTGER1P34995 402 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 PTGER3P43115 390 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 CXCR4P61073 352 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 ACVR1Q04771 509 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 ZNF177Q13360 481 aaPredicted RBP13.81□□□□□ -0.2
SFXN3-201ENST00000224807 LRRC32Q14392 662 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 CHRNA6Q15825 494 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 TATDN3Q17R31 274 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 POM121L1PQ3SYA9 428 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 ZC3H12BQ5HYM0 836 aaKnown RBP13.81□□□□□ -0.2
SFXN3-201ENST00000224807 TRIQKQ629K1 86 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 TSPAN33Q86UF1 283 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 ZBTB2Q8N680 514 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 NLGN4YQ8NFZ3 816 aaPredicted RBP13.81□□□□□ -0.2
SFXN3-201ENST00000224807 ASIC4Q96FT7 647 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 HRASLS5Q96KN8 279 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 SNX7Q9UNH6 387 aa13.81□□□□□ -0.2
SFXN3-201ENST00000224807 CCL15-CCL14A0A0B4J2E2 113 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 CIB4A0PJX0 185 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 FAM25AB3EWG3 89 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 FAM25CB3EWG5 89 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 FAM25GB3EWG6 89 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 I3L521 148 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 OR2B3O76000 313 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 CCNB2O95067 398 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 HIST1H2AGP0C0S8 130 aaPredicted RBP13.8□□□□□ -0.2
SFXN3-201ENST00000224807 ATF4P18848 351 aaPredicted RBP13.8□□□□□ -0.2
SFXN3-201ENST00000224807 HIST1H2ADP20671 130 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 PSMA1P25786 263 aaKnown RBP13.8□□□□□ -0.2
SFXN3-201ENST00000224807 OR3A3P47888 321 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 CLDN8P56748 225 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 SRP54P61011 504 aaKnown RBP13.8□□□□□ -0.2
SFXN3-201ENST00000224807 POU6F2P78424 691 aaPredicted RBP13.8□□□□□ -0.2
SFXN3-201ENST00000224807 CDC42EP1Q00587 391 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 IL18Q14116 193 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 ZNF79Q15937 498 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 CCL15Q16663 113 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 XKR6Q5GH73 641 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 FAM124AQ86V42 546 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 CCDC28AQ8IWP9 274 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 KIAA1958Q8N8K9 716 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 OR4A15Q8NGL6 344 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 POF1BQ8WVV4 589 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 HIST1H2AHQ96KK5 128 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 HIST1H2AJQ99878 128 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 H2AFJQ9BTM1 129 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 GALNT9Q9HCQ5 603 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 MBD1Q9UIS9 605 aaPredicted RBP13.8□□□□□ -0.2
SFXN3-201ENST00000224807 MGAT4DA6NG13 374 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 CAPN5O15484 640 aaPredicted RBP13.8□□□□□ -0.2
SFXN3-201ENST00000224807 OR10H3O60404 316 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 DGKAP23743 735 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 PBLDP30039 288 aaPredicted RBP13.8□□□□□ -0.2
SFXN3-201ENST00000224807 GPC1P35052 558 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 TIE1P35590 1138 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 CDC42P60953 191 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 MC1RQ01726 317 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 ABRQ12979 859 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 GAB1Q13480 694 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 INSL4Q14641 139 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 PCBP2Q15366 365 aaKnown RBP eCLIP13.8□□□□□ -0.28e-8■■■□□ 15.4
SFXN3-201ENST00000224807 CCDC190Q86UF4 302 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 TCEANCQ8N8B7 351 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 NARFLQ9H6Q4 476 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 TVP23BQ9NYZ1 205 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 TMPRSS11EQ9UL52 423 aa13.8□□□□□ -0.2
SFXN3-201ENST00000224807 SPIN1Q9Y657 262 aaPredicted RBP13.8□□□□□ -0.2
SFXN3-201ENST00000224807 PLXNB2O15031 1838 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms