RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 PDK3Q15120 406 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 ZNF385BQ569K4 471 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 CROCCQ5TZA2 2017 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 KIAA0895LQ68EN5 471 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 ANKRD26P1Q6NSI1 321 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 EPHX4Q8IUS5 362 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 PPCDCQ96CD2 204 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 RNF145Q96MT1 663 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 BDH2Q9BUT1 245 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 TPT1P8Q9HAU6 139 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 SH3BP4Q9P0V3 963 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 SCOCQ9UIL1 159 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 VPS4AQ9UN37 437 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 CA5BQ9Y2D0 317 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 DGKBQ9Y6T7 804 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 A6NHS1 94 aa13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 SAP18O00422 153 aaKnown RBP13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 CAPN5O15484 640 aaPredicted RBP13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 DEAF1O75398 565 aaPredicted RBP13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 KCNK5O95279 499 aa13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 RASAL1O95294 804 aa13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 CPSF4O95639 269 aaKnown RBP13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 IGHV4-34P06331 123 aa13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 CKMT2P17540 419 aa13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 DDX5P17844 614 aaKnown RBP13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 CD72P21854 359 aa13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 RABIFP47224 123 aa13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 TAS2R50P59544 299 aa13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 SRP54P61011 504 aaKnown RBP13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 SLC14A1Q13336 389 aa13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 VEZF1Q14119 521 aa13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 ZIC1Q15915 447 aa13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 VMACQ2NL98 169 aa13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 ALG11Q2TAA5 492 aa13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 TMEM35AQ53FP2 167 aa13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 UGT2A3Q6UWM9 527 aa13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 ZNF852Q6ZMS4 543 aa13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 ZZZ3Q8IYH5 903 aa13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 CREB3L4Q8TEY5 395 aa13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 ZFP90Q8TF47 636 aa13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 ZFPM2Q8WW38 1151 aa13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 FAM162AQ96A26 154 aa13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 SEPHS2Q99611 448 aa13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 CHST8Q9H2A9 424 aa13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 AASDHPPTQ9NRN7 309 aa13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 KLF15Q9UIH9 416 aa13.69□□□□□ -0.22
RTFDC1-201ENST00000023939 SOCS2O14508 198 aa13.68□□□□□ -0.22
RTFDC1-201ENST00000023939 CLOCKO15516 846 aa13.68□□□□□ -0.22
RTFDC1-201ENST00000023939 OR1F1O43749 312 aa13.68□□□□□ -0.22
RTFDC1-201ENST00000023939 TPST1O60507 370 aa13.68□□□□□ -0.22
RTFDC1-201ENST00000023939 AHRP35869 848 aa13.68□□□□□ -0.22
RTFDC1-201ENST00000023939 TRA2BP62995 288 aaKnown RBP13.68□□□□□ -0.22
RTFDC1-201ENST00000023939 TXNL4AP83876 142 aaKnown RBP13.68□□□□□ -0.22
RTFDC1-201ENST00000023939 CCNYL2Q5T2Q4 361 aa13.68□□□□□ -0.22
RTFDC1-201ENST00000023939 TMEM154Q6P9G4 183 aa13.68□□□□□ -0.22
RTFDC1-201ENST00000023939 Q6ZS52 159 aa13.68□□□□□ -0.22
RTFDC1-201ENST00000023939 Q6ZSR6 202 aa13.68□□□□□ -0.22
RTFDC1-201ENST00000023939 APLFQ8IW19 511 aaPredicted RBP13.68□□□□□ -0.22
RTFDC1-201ENST00000023939 OR2L3Q8NG85 312 aa13.68□□□□□ -0.22
RTFDC1-201ENST00000023939 TSACCQ96A04 125 aaPredicted RBP13.68□□□□□ -0.22
RTFDC1-201ENST00000023939 RGMAQ96B86 450 aa13.68□□□□□ -0.22
RTFDC1-201ENST00000023939 F2RL3Q96RI0 385 aa13.68□□□□□ -0.22
RTFDC1-201ENST00000023939 DDX31Q9H8H2 851 aaKnown RBP13.68□□□□□ -0.22
RTFDC1-201ENST00000023939 MRPS30Q9NP92 439 aaKnown RBP13.68□□□□□ -0.22
RTFDC1-201ENST00000023939 GPR27Q9NS67 375 aa13.68□□□□□ -0.22
RTFDC1-201ENST00000023939 ZNF624Q9P2J8 865 aaPredicted RBP13.68□□□□□ -0.22
RTFDC1-201ENST00000023939 NDRG2Q9UN36 371 aaKnown RBP13.68□□□□□ -0.22
RTFDC1-201ENST00000023939 C5orf42Q9H799 3197 aa13.68□□□□□ -0.22
RTFDC1-201ENST00000023939 REV3LO60673 3130 aa13.68□□□□□ -0.22
RTFDC1-201ENST00000023939 FEZF1A0PJY2 475 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 FAM149AA5PLN7 773 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 SAC3D1A6NKF1 404 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 TXNDC9O14530 226 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 NDUFS4O43181 175 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 LCMT2O60294 686 aaKnown RBP13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 EML2O95834 649 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 GBAP04062 536 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 IL3P08700 152 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 DDCP20711 480 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 PEBP1P30086 187 aaKnown RBP13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 GRK3P35626 688 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 CHN2P52757 468 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 MAPK12P53778 367 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 TFF2Q03403 129 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 ADRM1Q16186 407 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 NKG7Q16617 165 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 NRF1Q16656 503 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 MPEG1Q2M385 716 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 ADPRMQ3LIE5 342 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 NHSL2Q5HYW2 709 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 ZNF425Q6IV72 752 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 ENPP6Q6UWR7 440 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 AMIGO1Q86WK6 493 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 NUDT13Q86X67 352 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 PTOV1Q86YD1 416 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 CBR4Q8N4T8 237 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 TBC1D19Q8N5T2 526 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 FAM47BQ8NA70 645 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 OR4A15Q8NGL6 344 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 NETO1Q8TDF5 533 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 366.8 ms