RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 RASSF7Q02833 373 aa20.52■□□□□ 0.88
SRRM4-204ENST00000641899 DNAJC10Q8IXB1 793 aa20.52■□□□□ 0.88
SRRM4-204ENST00000641899 SLC52A2Q9HAB3 445 aa20.52■□□□□ 0.88
SRRM4-204ENST00000641899 SERPINB2P05120 415 aa20.51■□□□□ 0.87
SRRM4-204ENST00000641899 HSPA1AP0DMV8 641 aaKnown RBP20.51■□□□□ 0.87
SRRM4-204ENST00000641899 HSPA1BP0DMV9 641 aaKnown RBP20.51■□□□□ 0.87
SRRM4-204ENST00000641899 NFIXQ14938 502 aa20.51■□□□□ 0.87
SRRM4-204ENST00000641899 C2CD5Q86YS7 1000 aa20.51■□□□□ 0.87
SRRM4-204ENST00000641899 AEBP1Q8IUX7 1158 aa20.51■□□□□ 0.87
SRRM4-204ENST00000641899 PANK3Q9H999 370 aa20.51■□□□□ 0.87
SRRM4-204ENST00000641899 VSIG10Q8N0Z9 540 aa20.5■□□□□ 0.87
SRRM4-204ENST00000641899 COL15A1P39059 1388 aa20.49■□□□□ 0.87
SRRM4-204ENST00000641899 A0A087WZG4 1122 aa20.49■□□□□ 0.87
SRRM4-204ENST00000641899 CYP19A1P11511 503 aaPredicted RBP20.49■□□□□ 0.87
SRRM4-204ENST00000641899 STARD3NLO95772 234 aa20.48■□□□□ 0.87
SRRM4-204ENST00000641899 NPM2Q86SE8 214 aaKnown RBP20.48■□□□□ 0.87
SRRM4-204ENST00000641899 PDE6BP35913 854 aa20.47■□□□□ 0.87
SRRM4-204ENST00000641899 EIF4G2P78344 907 aaKnown RBP eCLIP20.47■□□□□ 0.87
SRRM4-204ENST00000641899 KNSTRNQ9Y448 316 aa20.47■□□□□ 0.87
SRRM4-204ENST00000641899 TTC5Q8N0Z6 440 aa20.46■□□□□ 0.87
SRRM4-204ENST00000641899 MYH14Q7Z406 1995 aaKnown RBP20.46■□□□□ 0.87
SRRM4-204ENST00000641899 IL13P35225 146 aa20.45■□□□□ 0.86
SRRM4-204ENST00000641899 ERFEQ4G0M1 354 aa20.45■□□□□ 0.86
SRRM4-204ENST00000641899 ZBTB1Q9Y2K1 713 aa20.45■□□□□ 0.86
SRRM4-204ENST00000641899 NPHP1O15259 732 aa20.44■□□□□ 0.86
SRRM4-204ENST00000641899 RNMTO43148 476 aaKnown RBP20.44■□□□□ 0.86
SRRM4-204ENST00000641899 ZNF622Q969S3 477 aaKnown RBP eCLIP20.44■□□□□ 0.86
SRRM4-204ENST00000641899 CANXP27824 592 aaKnown RBP20.43■□□□□ 0.86
SRRM4-204ENST00000641899 SLC39A6Q13433 755 aa20.43■□□□□ 0.86
SRRM4-204ENST00000641899 SOGA3Q5TF21 947 aa20.43■□□□□ 0.86
SRRM4-204ENST00000641899 BRIP1Q9BX63 1249 aa20.43■□□□□ 0.86
SRRM4-204ENST00000641899 TEX13AQ9BXU3 409 aaPredicted RBP20.43■□□□□ 0.86
SRRM4-204ENST00000641899 CREBZFQ9NS37 354 aa20.43■□□□□ 0.86
SRRM4-204ENST00000641899 TJP1Q07157 1748 aa20.42■□□□□ 0.86
SRRM4-204ENST00000641899 NFKBIEO00221 500 aa20.42■□□□□ 0.86
SRRM4-204ENST00000641899 BICDL1Q6ZP65 573 aa20.42■□□□□ 0.86
SRRM4-204ENST00000641899 LGR6Q9HBX8 967 aa20.42■□□□□ 0.86
SRRM4-204ENST00000641899 CHADLQ6NUI6 762 aa20.41■□□□□ 0.86
SRRM4-204ENST00000641899 IQCA1LA6NCM1 817 aa20.4■□□□□ 0.86
SRRM4-204ENST00000641899 CNKSR1Q969H4 720 aa20.4■□□□□ 0.86
SRRM4-204ENST00000641899 TAOK3Q9H2K8 898 aa20.4■□□□□ 0.86
SRRM4-204ENST00000641899 CLSPNQ9HAW4 1339 aa20.4■□□□□ 0.86
SRRM4-204ENST00000641899 BCL2L12Q9HB09 334 aa20.4■□□□□ 0.86
SRRM4-204ENST00000641899 C21orf2O43822 256 aa20.39■□□□□ 0.85
SRRM4-204ENST00000641899 CARMIL3Q8ND23 1372 aa20.38■□□□□ 0.85
SRRM4-204ENST00000641899 LTBP3Q9NS15 1303 aa20.38■□□□□ 0.85
SRRM4-204ENST00000641899 EIF5P55010 431 aaKnown RBP20.38■□□□□ 0.85
SRRM4-204ENST00000641899 TRIM26Q12899 539 aaPredicted RBP20.38■□□□□ 0.85
SRRM4-204ENST00000641899 AIDAQ96BJ3 306 aa20.38■□□□□ 0.85
SRRM4-204ENST00000641899 MRC1P22897 1456 aa20.37■□□□□ 0.85
SRRM4-204ENST00000641899 SBF1O95248 1867 aa20.37■□□□□ 0.85
SRRM4-204ENST00000641899 ST5P78524 1137 aa20.37■□□□□ 0.85
SRRM4-204ENST00000641899 SETDB2Q96T68 719 aa20.37■□□□□ 0.85
SRRM4-204ENST00000641899 HMOX1P09601 288 aa20.36■□□□□ 0.85
SRRM4-204ENST00000641899 TEFQ10587 303 aa20.36■□□□□ 0.85
SRRM4-204ENST00000641899 ZNF219Q9P2Y4 722 aaPredicted RBP20.36■□□□□ 0.85
SRRM4-204ENST00000641899 ZNF330Q9Y3S2 320 aaPredicted RBP20.36■□□□□ 0.85
SRRM4-204ENST00000641899 ADAMTS7Q9UKP4 1686 aa20.35■□□□□ 0.85
SRRM4-204ENST00000641899 POTECB2RU33 542 aa20.35■□□□□ 0.85
SRRM4-204ENST00000641899 HSPA5P11021 654 aaKnown RBP20.35■□□□□ 0.85
SRRM4-204ENST00000641899 CNBD1Q8NA66 436 aa20.35■□□□□ 0.85
SRRM4-204ENST00000641899 MKRN1Q9UHC7 482 aaKnown RBP20.35■□□□□ 0.85
SRRM4-204ENST00000641899 NRXN2Q9P2S2 1712 aa20.35■□□□□ 0.85
SRRM4-204ENST00000641899 SCN11AQ9UI33 1791 aa20.34■□□□□ 0.85
SRRM4-204ENST00000641899 DIAPH1O60610 1272 aaKnown RBP20.34■□□□□ 0.85
SRRM4-204ENST00000641899 IL6STP40189 918 aaPredicted RBP20.34■□□□□ 0.85
SRRM4-204ENST00000641899 MTHFSDQ2M296 383 aaKnown RBP20.34■□□□□ 0.85
SRRM4-204ENST00000641899 TBC1D9BQ66K14 1250 aa20.34■□□□□ 0.85
SRRM4-204ENST00000641899 STYK1Q6J9G0 422 aa20.34■□□□□ 0.85
SRRM4-204ENST00000641899 PCNTO95613 3336 aa20.33■□□□□ 0.85
SRRM4-204ENST00000641899 PRR5LQ6MZQ0 368 aa20.33■□□□□ 0.85
SRRM4-204ENST00000641899 LDHDQ86WU2 507 aa20.33■□□□□ 0.85
SRRM4-204ENST00000641899 MASTLQ96GX5 879 aa20.33■□□□□ 0.85
SRRM4-204ENST00000641899 PRDM10Q9NQV6 1147 aa20.33■□□□□ 0.85
SRRM4-204ENST00000641899 TIAM2Q8IVF5 1701 aa20.31■□□□□ 0.84
SRRM4-204ENST00000641899 DDNO94850 711 aaPredicted RBP20.31■□□□□ 0.84
SRRM4-204ENST00000641899 CTCFP49711 727 aaPredicted RBP20.31■□□□□ 0.84
SRRM4-204ENST00000641899 ZNF790Q6PG37 636 aa20.31■□□□□ 0.84
SRRM4-204ENST00000641899 GAS2L2Q8NHY3 880 aa20.31■□□□□ 0.84
SRRM4-204ENST00000641899 FMNL2Q96PY5 1086 aa20.31■□□□□ 0.84
SRRM4-204ENST00000641899 TBC1D2BQ9UPU7 963 aa20.31■□□□□ 0.84
SRRM4-204ENST00000641899 DLEC1Q9Y238 1755 aa20.31■□□□□ 0.84
SRRM4-204ENST00000641899 PRPF40BQ6NWY9 871 aaKnown RBP20.3■□□□□ 0.84
SRRM4-204ENST00000641899 ZNF652Q9Y2D9 606 aa20.3■□□□□ 0.84
SRRM4-204ENST00000641899 CNTNAP1P78357 1384 aa20.3■□□□□ 0.84
SRRM4-204ENST00000641899 HEG1Q9ULI3 1381 aa20.3■□□□□ 0.84
SRRM4-204ENST00000641899 GNAT3A8MTJ3 354 aa20.29■□□□□ 0.84
SRRM4-204ENST00000641899 CCDC93Q567U6 631 aa20.29■□□□□ 0.84
SRRM4-204ENST00000641899 ZNF496Q96IT1 587 aaPredicted RBP20.29■□□□□ 0.84
SRRM4-204ENST00000641899 AFDNP55196 1824 aaKnown RBP20.29■□□□□ 0.84
SRRM4-204ENST00000641899 TMEM88BA6NKF7 163 aa20.28■□□□□ 0.84
SRRM4-204ENST00000641899 SRGNP10124 158 aa20.28■□□□□ 0.84
SRRM4-204ENST00000641899 L3MBTL3Q96JM7 780 aaPredicted RBP20.28■□□□□ 0.84
SRRM4-204ENST00000641899 AMER1Q5JTC6 1135 aaPredicted RBP20.27■□□□□ 0.84
SRRM4-204ENST00000641899 PNMA8AQ86V59 439 aaPredicted RBP20.26■□□□□ 0.83
SRRM4-204ENST00000641899 NBPF5PQ86XG9 351 aaPredicted RBP20.26■□□□□ 0.83
SRRM4-204ENST00000641899 DZIP3Q86Y13 1208 aaKnown RBP20.26■□□□□ 0.83
SRRM4-204ENST00000641899 CCDC24Q8N4L8 307 aa20.26■□□□□ 0.83
SRRM4-204ENST00000641899 TAF1DQ9H5J8 278 aaPredicted RBP20.26■□□□□ 0.83
SRRM4-204ENST00000641899 CLEC11AQ9Y240 323 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms