RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 NPHP3Q7Z494 1330 aa20.88■□□□□ 0.93
PHGDH-229ENST00000641891 SLC39A6Q13433 755 aa20.87■□□□□ 0.93
PHGDH-229ENST00000641891 CADPS2Q86UW7 1296 aa20.87■□□□□ 0.93
PHGDH-229ENST00000641891 CHMP4AQ9BY43 222 aa20.87■□□□□ 0.93
PHGDH-229ENST00000641891 MAP3K2Q9Y2U5 619 aa20.87■□□□□ 0.93
PHGDH-229ENST00000641891 SRGAP3O43295 1099 aa20.87■□□□□ 0.93
PHGDH-229ENST00000641891 CSB-PGBD3P0DP91 1061 aa20.87■□□□□ 0.93
PHGDH-229ENST00000641891 LMTK3Q96Q04 1460 aa20.87■□□□□ 0.93
PHGDH-229ENST00000641891 EIF5BO60841 1220 aaKnown RBP20.86■□□□□ 0.93
PHGDH-229ENST00000641891 SURF6O75683 361 aaKnown RBP20.86■□□□□ 0.93
PHGDH-229ENST00000641891 MCM4P33991 863 aa20.86■□□□□ 0.93
PHGDH-229ENST00000641891 TATP17735 454 aaPredicted RBP20.86■□□□□ 0.93
PHGDH-229ENST00000641891 SCN11AQ9UI33 1791 aa20.85■□□□□ 0.93
PHGDH-229ENST00000641891 ERC2O15083 957 aa20.85■□□□□ 0.93
PHGDH-229ENST00000641891 PHKG2P15735 406 aa20.85■□□□□ 0.93
PHGDH-229ENST00000641891 NUTM1Q86Y26 1132 aa20.85■□□□□ 0.93
PHGDH-229ENST00000641891 RABEP1Q15276 862 aa20.85■□□□□ 0.93
PHGDH-229ENST00000641891 STAP2Q9UGK3 403 aa20.85■□□□□ 0.93
PHGDH-229ENST00000641891 C5P01031 1676 aa20.84■□□□□ 0.93
PHGDH-229ENST00000641891 RILPL2Q969X0 211 aa20.84■□□□□ 0.93
PHGDH-229ENST00000641891 XIRP1Q702N8 1843 aaKnown RBP20.84■□□□□ 0.93
PHGDH-229ENST00000641891 REC8O95072 547 aa20.83■□□□□ 0.93
PHGDH-229ENST00000641891 HSP90AA1P07900 732 aaKnown RBP20.83■□□□□ 0.93
PHGDH-229ENST00000641891 CWF19L2Q2TBE0 894 aaKnown RBP20.83■□□□□ 0.93
PHGDH-229ENST00000641891 UNC5CLQ8IV45 518 aa20.83■□□□□ 0.93
PHGDH-229ENST00000641891 SLC52A2Q9HAB3 445 aa20.83■□□□□ 0.93
PHGDH-229ENST00000641891 SPATA31A3Q5VYP0 1347 aa20.83■□□□□ 0.93
PHGDH-229ENST00000641891 TRIM6-TRIM34B2RNG4 842 aa20.83■□□□□ 0.92
PHGDH-229ENST00000641891 ZNF790Q6PG37 636 aa20.83■□□□□ 0.92
PHGDH-229ENST00000641891 KSR2Q6VAB6 950 aa20.83■□□□□ 0.92
PHGDH-229ENST00000641891 NFATC2IPQ8NCF5 419 aa20.83■□□□□ 0.92
PHGDH-229ENST00000641891 AIMP1Q12904 312 aaKnown RBP20.82■□□□□ 0.92
PHGDH-229ENST00000641891 RHPN1Q8TCX5 695 aa20.82■□□□□ 0.92
PHGDH-229ENST00000641891 SPG7Q9UQ90 795 aa20.82■□□□□ 0.92
PHGDH-229ENST00000641891 RAB11FIP3O75154 756 aa20.82■□□□□ 0.92
PHGDH-229ENST00000641891 PDIA6Q15084 440 aa20.82■□□□□ 0.92
PHGDH-229ENST00000641891 HYPKQ9NX55 129 aa20.81■□□□□ 0.92
PHGDH-229ENST00000641891 ESYT1Q9BSJ8 1104 aa20.8■□□□□ 0.92
PHGDH-229ENST00000641891 DDX21Q9NR30 783 aaKnown RBP eCLIP20.8■□□□□ 0.92
PHGDH-229ENST00000641891 C9orf78Q9NZ63 289 aaPredicted RBP20.8■□□□□ 0.92
PHGDH-229ENST00000641891 CYP27B1O15528 508 aa20.79■□□□□ 0.92
PHGDH-229ENST00000641891 CHMLP26374 656 aa20.79■□□□□ 0.92
PHGDH-229ENST00000641891 TNPO1Q92973 898 aaKnown RBP20.79■□□□□ 0.92
PHGDH-229ENST00000641891 CIZ1Q9ULV3 898 aaPredicted RBP20.79■□□□□ 0.92
PHGDH-229ENST00000641891 ALDH1L1O75891 902 aa20.79■□□□□ 0.92
PHGDH-229ENST00000641891 MAP4K4O95819 1239 aaPredicted RBP20.79■□□□□ 0.92
PHGDH-229ENST00000641891 BRINP3Q76B58 766 aa20.79■□□□□ 0.92
PHGDH-229ENST00000641891 IFNL2Q8IZJ0 200 aa20.79■□□□□ 0.92
PHGDH-229ENST00000641891 KIF1BPQ96EK5 621 aa20.78■□□□□ 0.92
PHGDH-229ENST00000641891 AOX1Q06278 1338 aa20.78■□□□□ 0.92
PHGDH-229ENST00000641891 MYL6BP14649 208 aa20.78■□□□□ 0.92
PHGDH-229ENST00000641891 RAB3GAP1Q15042 981 aa20.78■□□□□ 0.92
PHGDH-229ENST00000641891 ZNF496Q96IT1 587 aaPredicted RBP20.78■□□□□ 0.92
PHGDH-229ENST00000641891 ABCC6O95255 1503 aa20.77■□□□□ 0.92
PHGDH-229ENST00000641891 PI4K2BQ8TCG2 481 aa20.77■□□□□ 0.92
PHGDH-229ENST00000641891 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.77■□□□□ 0.92
PHGDH-229ENST00000641891 PKD1L3Q7Z443 1732 aa20.76■□□□□ 0.91
PHGDH-229ENST00000641891 CPDO75976 1380 aa20.76■□□□□ 0.91
PHGDH-229ENST00000641891 PA2G4Q9UQ80 394 aaKnown RBP20.76■□□□□ 0.91
PHGDH-229ENST00000641891 PIP4K2AP48426 406 aaPredicted RBP20.75■□□□□ 0.91
PHGDH-229ENST00000641891 MTX1Q13505 466 aa20.75■□□□□ 0.91
PHGDH-229ENST00000641891 SUCLG2Q96I99 432 aa20.75■□□□□ 0.91
PHGDH-229ENST00000641891 IL25Q9H293 177 aa20.75■□□□□ 0.91
PHGDH-229ENST00000641891 MRC1P22897 1456 aa20.75■□□□□ 0.91
PHGDH-229ENST00000641891 DDX58O95786 925 aaKnown RBP20.75■□□□□ 0.91
PHGDH-229ENST00000641891 OS9Q13438 667 aaPredicted RBP20.75■□□□□ 0.91
PHGDH-229ENST00000641891 LINS1Q8NG48 757 aa20.75■□□□□ 0.91
PHGDH-229ENST00000641891 KAZALD1Q96I82 304 aa20.74■□□□□ 0.91
PHGDH-229ENST00000641891 DCAF5Q96JK2 942 aa20.74■□□□□ 0.91
PHGDH-229ENST00000641891 ANO2Q9NQ90 1003 aa20.74■□□□□ 0.91
PHGDH-229ENST00000641891 GRM8O00222 908 aa20.73■□□□□ 0.91
PHGDH-229ENST00000641891 IGKV5-2P06315 115 aa20.73■□□□□ 0.91
PHGDH-229ENST00000641891 RIC3Q7Z5B4 369 aa20.73■□□□□ 0.91
PHGDH-229ENST00000641891 XAGE3Q8WTP9 111 aa20.73■□□□□ 0.91
PHGDH-229ENST00000641891 PALD1Q9ULE6 856 aa20.73■□□□□ 0.91
PHGDH-229ENST00000641891 USP16Q9Y5T5 823 aa20.73■□□□□ 0.91
PHGDH-229ENST00000641891 TRAK2O60296 914 aa20.73■□□□□ 0.91
PHGDH-229ENST00000641891 SSFA2P28290 1259 aa20.73■□□□□ 0.91
PHGDH-229ENST00000641891 GZF1Q9H116 711 aaPredicted RBP20.73■□□□□ 0.91
PHGDH-229ENST00000641891 BRPF3Q9ULD4 1205 aa20.73■□□□□ 0.91
PHGDH-229ENST00000641891 ST18O60284 1047 aa20.72■□□□□ 0.91
PHGDH-229ENST00000641891 HSP90AB4PQ58FF6 505 aa20.72■□□□□ 0.91
PHGDH-229ENST00000641891 STRCQ7RTU9 1775 aa20.72■□□□□ 0.91
PHGDH-229ENST00000641891 AK9Q5TCS8 1911 aa20.72■□□□□ 0.91
PHGDH-229ENST00000641891 COPS6Q7L5N1 327 aa20.72■□□□□ 0.91
PHGDH-229ENST00000641891 BICC1Q9H694 974 aaKnown RBP20.72■□□□□ 0.91
PHGDH-229ENST00000641891 DDX11L8A8MPP1 907 aa20.71■□□□□ 0.91
PHGDH-229ENST00000641891 TTC5Q8N0Z6 440 aa20.71■□□□□ 0.91
PHGDH-229ENST00000641891 UTYO14607 1347 aa20.71■□□□□ 0.91
PHGDH-229ENST00000641891 ZNF335Q9H4Z2 1342 aaPredicted RBP20.7■□□□□ 0.9
PHGDH-229ENST00000641891 CABP4P57796 275 aa20.7■□□□□ 0.9
PHGDH-229ENST00000641891 IL27Q8NEV9 243 aa20.7■□□□□ 0.9
PHGDH-229ENST00000641891 PRDM11Q9NQV5 511 aa20.7■□□□□ 0.9
PHGDH-229ENST00000641891 SNRPA1P09661 255 aaKnown RBP20.69■□□□□ 0.9
PHGDH-229ENST00000641891 LRP10Q7Z4F1 713 aa20.69■□□□□ 0.9
PHGDH-229ENST00000641891 MYD88Q99836 296 aa20.69■□□□□ 0.9
PHGDH-229ENST00000641891 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.69■□□□□ 0.9
PHGDH-229ENST00000641891 LARP1Q6PKG0 1096 aaKnown RBP20.69■□□□□ 0.9
PHGDH-229ENST00000641891 NEURL1BA8MQ27 555 aa20.68■□□□□ 0.9
PHGDH-229ENST00000641891 NEK4P51957 841 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms