RNA–Protein interactions for RNA: ENST00000640958.1

SP3-208, Transcript of Sp3 transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP3, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-208ENST00000640958 BCL11AQ9H165 835 aa25.28■■□□□ 1.64
SP3-208ENST00000640958 WDR17Q8IZU2 1322 aa25.28■■□□□ 1.64
SP3-208ENST00000640958 SLC39A6Q13433 755 aa25.28■■□□□ 1.64
SP3-208ENST00000640958 DCAF5Q96JK2 942 aa25.28■■□□□ 1.64
SP3-208ENST00000640958 OSBPL3Q9H4L5 887 aa25.27■■□□□ 1.64
SP3-208ENST00000640958 NFATC2IPQ8NCF5 419 aa25.27■■□□□ 1.64
SP3-208ENST00000640958 SSH3Q8TE77 659 aa25.27■■□□□ 1.64
SP3-208ENST00000640958 SALL3Q9BXA9 1300 aa25.27■■□□□ 1.64
SP3-208ENST00000640958 GLI3P10071 1580 aa25.26■■□□□ 1.63
SP3-208ENST00000640958 HYPKQ9NX55 129 aa25.26■■□□□ 1.63
SP3-208ENST00000640958 LRRCC1Q9C099 1032 aa25.25■■□□□ 1.63
SP3-208ENST00000640958 DDX21Q9NR30 783 aaKnown RBP eCLIP25.25■■□□□ 1.63
SP3-208ENST00000640958 USP35Q9P2H5 1018 aa25.25■■□□□ 1.63
SP3-208ENST00000640958 NBPF7P0C2Y1 421 aaPredicted RBP25.25■■□□□ 1.63
SP3-208ENST00000640958 POLA2Q14181 598 aa25.25■■□□□ 1.63
SP3-208ENST00000640958 PDIA6Q15084 440 aa25.25■■□□□ 1.63
SP3-208ENST00000640958 KSR2Q6VAB6 950 aa25.25■■□□□ 1.63
SP3-208ENST00000640958 MAP3K2Q9Y2U5 619 aa25.24■■□□□ 1.63
SP3-208ENST00000640958 HSP90AB1P08238 724 aaKnown RBP25.24■■□□□ 1.63
SP3-208ENST00000640958 SDSP20132 328 aa25.24■■□□□ 1.63
SP3-208ENST00000640958 PDE1AP54750 535 aa25.24■■□□□ 1.63
SP3-208ENST00000640958 SHANK3Q9BYB0 1731 aa25.23■■□□□ 1.63
SP3-208ENST00000640958 LAMB4A4D0S4 1761 aa25.23■■□□□ 1.63
SP3-208ENST00000640958 ALDH1L1O75891 902 aa25.22■■□□□ 1.63
SP3-208ENST00000640958 PPP1R42Q7Z4L9 355 aa25.22■■□□□ 1.63
SP3-208ENST00000640958 ZNF496Q96IT1 587 aaPredicted RBP25.21■■□□□ 1.63
SP3-208ENST00000640958 NFKBIBQ15653 356 aa25.21■■□□□ 1.63
SP3-208ENST00000640958 TOM1L2Q6ZVM7 507 aa25.2■■□□□ 1.62
SP3-208ENST00000640958 KIF2CQ99661 725 aa25.2■■□□□ 1.62
SP3-208ENST00000640958 ANTXR1Q9H6X2 564 aa25.2■■□□□ 1.62
SP3-208ENST00000640958 EIF5BO60841 1220 aaKnown RBP25.19■■□□□ 1.62
SP3-208ENST00000640958 PCDH11XQ9BZA7 1347 aa25.18■■□□□ 1.62
SP3-208ENST00000640958 PCDH11YQ9BZA8 1340 aa25.18■■□□□ 1.62
SP3-208ENST00000640958 UBR2Q8IWV8 1755 aa25.18■■□□□ 1.62
SP3-208ENST00000640958 DDX58O95786 925 aaKnown RBP25.17■■□□□ 1.62
SP3-208ENST00000640958 TTC5Q8N0Z6 440 aa25.17■■□□□ 1.62
SP3-208ENST00000640958 SLKQ9H2G2 1235 aaPredicted RBP25.17■■□□□ 1.62
SP3-208ENST00000640958 SRGAP3O43295 1099 aa25.16■■□□□ 1.62
SP3-208ENST00000640958 RAB11FIP3O75154 756 aa25.16■■□□□ 1.62
SP3-208ENST00000640958 MX1P20591 662 aa25.16■■□□□ 1.62
SP3-208ENST00000640958 MTX1Q13505 466 aa25.16■■□□□ 1.62
SP3-208ENST00000640958 SNX21Q969T3 373 aa25.16■■□□□ 1.62
SP3-208ENST00000640958 CARD10Q9BWT7 1032 aa25.16■■□□□ 1.62
SP3-208ENST00000640958 PAPPAQ13219 1627 aa25.16■■□□□ 1.62
SP3-208ENST00000640958 SNRPA1P09661 255 aaKnown RBP25.16■■□□□ 1.62
SP3-208ENST00000640958 CABP4P57796 275 aa25.16■■□□□ 1.62
SP3-208ENST00000640958 LINS1Q8NG48 757 aa25.16■■□□□ 1.62
SP3-208ENST00000640958 ZCRB1Q8TBF4 217 aaKnown RBP25.16■■□□□ 1.62
SP3-208ENST00000640958 STAP2Q9UGK3 403 aa25.16■■□□□ 1.62
SP3-208ENST00000640958 CWF19L2Q2TBE0 894 aaKnown RBP25.15■■□□□ 1.62
SP3-208ENST00000640958 FMNL2Q96PY5 1086 aa25.15■■□□□ 1.62
SP3-208ENST00000640958 HSCBQ8IWL3 235 aa25.15■■□□□ 1.62
SP3-208ENST00000640958 SURF6O75683 361 aaKnown RBP25.14■■□□□ 1.62
SP3-208ENST00000640958 AIMP1Q12904 312 aaKnown RBP25.14■■□□□ 1.62
SP3-208ENST00000640958 TSHZ3Q63HK5 1081 aa25.14■■□□□ 1.62
SP3-208ENST00000640958 LRP10Q7Z4F1 713 aa25.14■■□□□ 1.62
SP3-208ENST00000640958 UTYO14607 1347 aa25.13■■□□□ 1.61
SP3-208ENST00000640958 AOX1Q06278 1338 aa25.13■■□□□ 1.61
SP3-208ENST00000640958 CASC1Q6TDU7 716 aa25.13■■□□□ 1.61
SP3-208ENST00000640958 C9orf78Q9NZ63 289 aaPredicted RBP25.13■■□□□ 1.61
SP3-208ENST00000640958 USP16Q9Y5T5 823 aa25.13■■□□□ 1.61
SP3-208ENST00000640958 MYL6BP14649 208 aa25.12■■□□□ 1.61
SP3-208ENST00000640958 IL2RBP14784 551 aa25.12■■□□□ 1.61
SP3-208ENST00000640958 RHPN1Q8TCX5 695 aa25.12■■□□□ 1.61
SP3-208ENST00000640958 XAGE3Q8WTP9 111 aa25.12■■□□□ 1.61
SP3-208ENST00000640958 IL1RAPL2Q9NP60 686 aa25.12■■□□□ 1.61
SP3-208ENST00000640958 ARFGEF2Q9Y6D5 1785 aa25.11■■□□□ 1.61
SP3-208ENST00000640958 LARP1Q6PKG0 1096 aaKnown RBP25.11■■□□□ 1.61
SP3-208ENST00000640958 NKX1-1Q15270 411 aaPredicted RBP25.1■■□□□ 1.61
SP3-208ENST00000640958 USP26Q9BXU7 913 aa25.1■■□□□ 1.61
SP3-208ENST00000640958 TOGARAM1Q9Y4F4 1720 aa25.1■■□□□ 1.61
SP3-208ENST00000640958 GRM8O00222 908 aa25.1■■□□□ 1.61
SP3-208ENST00000640958 IGKV5-2P06315 115 aa25.1■■□□□ 1.61
SP3-208ENST00000640958 RIC3Q7Z5B4 369 aa25.1■■□□□ 1.61
SP3-208ENST00000640958 KIF1BPQ96EK5 621 aa25.1■■□□□ 1.61
SP3-208ENST00000640958 STRN4Q9NRL3 753 aa25.1■■□□□ 1.61
SP3-208ENST00000640958 HDAC5Q9UQL6 1122 aa25.1■■□□□ 1.61
SP3-208ENST00000640958 AFDNP55196 1824 aaKnown RBP25.09■■□□□ 1.61
SP3-208ENST00000640958 AK9Q5TCS8 1911 aa25.09■■□□□ 1.61
SP3-208ENST00000640958 KCPQ6ZWJ8 1503 aa25.09■■□□□ 1.61
SP3-208ENST00000640958 COPS6Q7L5N1 327 aa25.09■■□□□ 1.61
SP3-208ENST00000640958 ROBO1Q9Y6N7 1651 aa25.08■■□□□ 1.61
SP3-208ENST00000640958 ERVV-2B6SEH9 535 aa25.08■■□□□ 1.61
SP3-208ENST00000640958 HSP90AB4PQ58FF6 505 aa25.08■■□□□ 1.61
SP3-208ENST00000640958 FRAT2O75474 233 aaPredicted RBP25.07■■□□□ 1.6
SP3-208ENST00000640958 KAZALD1Q96I82 304 aa25.07■■□□□ 1.6
SP3-208ENST00000640958 SUCLG2Q96I99 432 aa25.07■■□□□ 1.6
SP3-208ENST00000640958 METTL22Q9BUU2 404 aaPredicted RBP25.07■■□□□ 1.6
SP3-208ENST00000640958 SPRYD3Q8NCJ5 442 aa25.06■■□□□ 1.6
SP3-208ENST00000640958 NEURL1BA8MQ27 555 aa25.06■■□□□ 1.6
SP3-208ENST00000640958 ERC2O15083 957 aa25.06■■□□□ 1.6
SP3-208ENST00000640958 DEKP35659 375 aaKnown RBP25.06■■□□□ 1.6
SP3-208ENST00000640958 NUTM1Q86Y26 1132 aa25.06■■□□□ 1.6
SP3-208ENST00000640958 AHDC1Q5TGY3 1603 aaPredicted RBP25.05■■□□□ 1.6
SP3-208ENST00000640958 COL14A1Q05707 1796 aaKnown RBP25.05■■□□□ 1.6
SP3-208ENST00000640958 EVA1CP58658 441 aa25.05■■□□□ 1.6
SP3-208ENST00000640958 RBM42Q9BTD8 480 aaKnown RBP25.05■■□□□ 1.6
SP3-208ENST00000640958 COL22A1Q8NFW1 1626 aaPredicted RBP25.05■■□□□ 1.6
SP3-208ENST00000640958 REC8O95072 547 aa25.04■■□□□ 1.6
SP3-208ENST00000640958 CD2BP2O95400 341 aaKnown RBP25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms