RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 EID1Q9Y6B2 187 aa16.52■□□□□ 0.24
PAX6-280ENST00000640872 RIMS1Q86UR5 1692 aaKnown RBP16.52■□□□□ 0.24
PAX6-280ENST00000640872 FOXO3O43524 673 aa16.51■□□□□ 0.23
PAX6-280ENST00000640872 GTF2F1P35269 517 aaKnown RBP eCLIP16.51■□□□□ 0.23
PAX6-280ENST00000640872 NOLC1Q14978 699 aaKnown RBP eCLIP16.51■□□□□ 0.23
PAX6-280ENST00000640872 MTHFSDQ2M296 383 aaKnown RBP16.51■□□□□ 0.23
PAX6-280ENST00000640872 ZNF830Q96NB3 372 aaPredicted RBP16.51■□□□□ 0.23
PAX6-280ENST00000640872 TOPAZ1Q8N9V7 1692 aa16.51■□□□□ 0.23
PAX6-280ENST00000640872 MAP3K19Q56UN5 1328 aa16.5■□□□□ 0.23
PAX6-280ENST00000640872 SOX12O15370 315 aa16.5■□□□□ 0.23
PAX6-280ENST00000640872 ADCY5O95622 1261 aa16.5■□□□□ 0.23
PAX6-280ENST00000640872 FLIIQ13045 1269 aa16.5■□□□□ 0.23
PAX6-280ENST00000640872 CNPY2Q9Y2B0 182 aa16.5■□□□□ 0.23
PAX6-280ENST00000640872 USP31Q70CQ4 1352 aa16.5■□□□□ 0.23
PAX6-280ENST00000640872 LRRC37A3O60309 1634 aa16.5■□□□□ 0.23
PAX6-280ENST00000640872 LETM1O95202 739 aaPredicted RBP16.5■□□□□ 0.23
PAX6-280ENST00000640872 TTC14Q96N46 770 aa16.5■□□□□ 0.23
PAX6-280ENST00000640872 CCDC94Q9BW85 323 aaPredicted RBP16.5■□□□□ 0.23
PAX6-280ENST00000640872 STK31Q9BXU1 1019 aa16.5■□□□□ 0.23
PAX6-280ENST00000640872 SPTLC3Q9NUV7 552 aa16.5■□□□□ 0.23
PAX6-280ENST00000640872 FMN2Q9NZ56 1722 aa16.49■□□□□ 0.23
PAX6-280ENST00000640872 ZSCAN22P10073 491 aaPredicted RBP16.49■□□□□ 0.23
PAX6-280ENST00000640872 HMGN5P82970 282 aaKnown RBP16.49■□□□□ 0.23
PAX6-280ENST00000640872 DNTTIP2Q5QJE6 756 aaKnown RBP16.49■□□□□ 0.23
PAX6-280ENST00000640872 RTF1Q92541 710 aaKnown RBP16.49■□□□□ 0.23
PAX6-280ENST00000640872 RAD50Q92878 1312 aa16.49■□□□□ 0.23
PAX6-280ENST00000640872 HCLS1P14317 486 aaPredicted RBP16.49■□□□□ 0.23
PAX6-280ENST00000640872 UBE2HP62256 183 aa16.49■□□□□ 0.23
PAX6-280ENST00000640872 MPNDQ8N594 471 aa16.49■□□□□ 0.23
PAX6-280ENST00000640872 TTC12Q9H892 705 aaPredicted RBP16.49■□□□□ 0.23
PAX6-280ENST00000640872 LRRFIP2Q9Y608 721 aaKnown RBP16.49■□□□□ 0.23
PAX6-280ENST00000640872 PXDNLA1KZ92 1463 aa16.48■□□□□ 0.23
PAX6-280ENST00000640872 FKBP5Q13451 457 aaPredicted RBP16.48■□□□□ 0.23
PAX6-280ENST00000640872 ZNF710Q8N1W2 664 aa16.48■□□□□ 0.23
PAX6-280ENST00000640872 KLHL34Q8N239 644 aa16.48■□□□□ 0.23
PAX6-280ENST00000640872 KDRP35968 1356 aa16.48■□□□□ 0.23
PAX6-280ENST00000640872 FUCA2Q9BTY2 467 aa16.48■□□□□ 0.23
PAX6-280ENST00000640872 SOS1Q07889 1333 aaPredicted RBP16.47■□□□□ 0.23
PAX6-280ENST00000640872 USP6P35125 1406 aa16.47■□□□□ 0.23
PAX6-280ENST00000640872 JARID2Q92833 1246 aaPredicted RBP16.47■□□□□ 0.23
PAX6-280ENST00000640872 ARID3AQ99856 593 aa16.47■□□□□ 0.23
PAX6-280ENST00000640872 SNX14Q9Y5W7 946 aa16.47■□□□□ 0.23
PAX6-280ENST00000640872 SGSM2O43147 1006 aa16.46■□□□□ 0.23
PAX6-280ENST00000640872 KDM4AO75164 1064 aa16.46■□□□□ 0.23
PAX6-280ENST00000640872 CCDC30Q5VVM6 783 aa16.46■□□□□ 0.23
PAX6-280ENST00000640872 CACNA1FO60840 1977 aa16.46■□□□□ 0.23
PAX6-280ENST00000640872 ARHGAP23Q9P227 1491 aa16.46■□□□□ 0.23
PAX6-280ENST00000640872 PLEKHG3A1L390 1219 aa16.46■□□□□ 0.23
PAX6-280ENST00000640872 STX6O43752 255 aa16.46■□□□□ 0.23
PAX6-280ENST00000640872 SYT1P21579 422 aa16.46■□□□□ 0.23
PAX6-280ENST00000640872 THEMISQ8N1K5 641 aaPredicted RBP16.46■□□□□ 0.23
PAX6-280ENST00000640872 C17orf53Q8N3J3 647 aaPredicted RBP16.46■□□□□ 0.23
PAX6-280ENST00000640872 IL1RAPL2Q9NP60 686 aa16.46■□□□□ 0.23
PAX6-280ENST00000640872 TBX22Q9Y458 520 aa16.46■□□□□ 0.23
PAX6-280ENST00000640872 FER1L4A9Z1Z3 1794 aa16.45■□□□□ 0.22
PAX6-280ENST00000640872 ZBTB7CA1YPR0 619 aa16.45■□□□□ 0.22
PAX6-280ENST00000640872 F13A1P00488 732 aa16.45■□□□□ 0.22
PAX6-280ENST00000640872 AK2P54819 239 aa16.45■□□□□ 0.22
PAX6-280ENST00000640872 PI4K2BQ8TCG2 481 aa16.45■□□□□ 0.22
PAX6-280ENST00000640872 SSH3Q8TE77 659 aa16.45■□□□□ 0.22
PAX6-280ENST00000640872 LSG1Q9H089 658 aaKnown RBP16.45■□□□□ 0.22
PAX6-280ENST00000640872 CRYBG1Q9Y4K1 1723 aa16.45■□□□□ 0.22
PAX6-280ENST00000640872 SLIT1O75093 1534 aa16.45■□□□□ 0.22
PAX6-280ENST00000640872 RUFY3Q7L099 469 aa16.45■□□□□ 0.22
PAX6-280ENST00000640872 NUTM1Q86Y26 1132 aa16.45■□□□□ 0.22
PAX6-280ENST00000640872 USP44Q9H0E7 712 aa16.45■□□□□ 0.22
PAX6-280ENST00000640872 ADAMTSL3P82987 1691 aa16.45■□□□□ 0.22
PAX6-280ENST00000640872 CEP170BQ9Y4F5 1589 aaPredicted RBP16.44■□□□□ 0.22
PAX6-280ENST00000640872 TSC1Q92574 1164 aa16.44■□□□□ 0.22
PAX6-280ENST00000640872 RBM33Q96EV2 1170 aaKnown RBP16.44■□□□□ 0.22
PAX6-280ENST00000640872 LIMCH1Q9UPQ0 1083 aa16.44■□□□□ 0.22
PAX6-280ENST00000640872 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.44■□□□□ 0.22
PAX6-280ENST00000640872 RASEFQ8IZ41 740 aa16.44■□□□□ 0.22
PAX6-280ENST00000640872 RAB11FIP3O75154 756 aa16.43■□□□□ 0.22
PAX6-280ENST00000640872 KCNA6P17658 529 aa16.43■□□□□ 0.22
PAX6-280ENST00000640872 FIBPO43427 364 aa16.43■□□□□ 0.22
PAX6-280ENST00000640872 UBTFL1P0CB47 393 aaPredicted RBP16.43■□□□□ 0.22
PAX6-280ENST00000640872 ATP6V1DQ9Y5K8 247 aa16.43■□□□□ 0.22
PAX6-280ENST00000640872 IGSF1Q8N6C5 1336 aa16.42■□□□□ 0.22
PAX6-280ENST00000640872 AP5Z1O43299 807 aa16.42■□□□□ 0.22
PAX6-280ENST00000640872 MAP4K4O95819 1239 aaPredicted RBP16.42■□□□□ 0.22
PAX6-280ENST00000640872 POLA2Q14181 598 aa16.42■□□□□ 0.22
PAX6-280ENST00000640872 SMC3Q9UQE7 1217 aa16.42■□□□□ 0.22
PAX6-280ENST00000640872 SBNO1A3KN83 1393 aa16.42■□□□□ 0.22
PAX6-280ENST00000640872 FLT4P35916 1363 aa16.42■□□□□ 0.22
PAX6-280ENST00000640872 HTATSF1O43719 755 aaKnown RBP16.42■□□□□ 0.22
PAX6-280ENST00000640872 GIMAP6Q6P9H5 292 aa16.41■□□□□ 0.22
PAX6-280ENST00000640872 KIAA1524Q8TCG1 905 aa16.41■□□□□ 0.22
PAX6-280ENST00000640872 RHPN1Q8TCX5 695 aa16.41■□□□□ 0.22
PAX6-280ENST00000640872 KCNF1Q9H3M0 494 aa16.41■□□□□ 0.22
PAX6-280ENST00000640872 KIF3AQ9Y496 699 aa16.41■□□□□ 0.22
PAX6-280ENST00000640872 LARGE1O95461 756 aa16.41■□□□□ 0.22
PAX6-280ENST00000640872 NECTIN2Q92692 538 aa16.41■□□□□ 0.22
PAX6-280ENST00000640872 LARP6Q9BRS8 491 aaKnown RBP16.41■□□□□ 0.22
PAX6-280ENST00000640872 PPP1R42Q7Z4L9 355 aa16.4■□□□□ 0.22
PAX6-280ENST00000640872 EYA1Q99502 592 aa16.4■□□□□ 0.22
PAX6-280ENST00000640872 PRDM10Q9NQV6 1147 aa16.4■□□□□ 0.22
PAX6-280ENST00000640872 MTMR6Q9Y217 621 aa16.4■□□□□ 0.22
PAX6-280ENST00000640872 SURF6O75683 361 aaKnown RBP16.4■□□□□ 0.22
PAX6-280ENST00000640872 TPRNQ4KMQ1 711 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms