RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 ARHGEF5Q12774 1597 aa20.76■□□□□ 0.91
SCARB2-223ENST00000640640 RAI14Q9P0K7 980 aa20.76■□□□□ 0.91
SCARB2-223ENST00000640640 CDKL5O76039 1030 aa20.76■□□□□ 0.91
SCARB2-223ENST00000640640 ANKRD13DQ6ZTN6 518 aa20.76■□□□□ 0.91
SCARB2-223ENST00000640640 SMC5Q8IY18 1101 aa20.76■□□□□ 0.91
SCARB2-223ENST00000640640 CFAP65Q6ZU64 1925 aaKnown RBP20.76■□□□□ 0.91
SCARB2-223ENST00000640640 PDE1AP54750 535 aa20.75■□□□□ 0.91
SCARB2-223ENST00000640640 PTPRTO14522 1441 aa20.75■□□□□ 0.91
SCARB2-223ENST00000640640 A0A0U1RQG5 324 aaPredicted RBP20.75■□□□□ 0.91
SCARB2-223ENST00000640640 SMC2O95347 1197 aa20.74■□□□□ 0.91
SCARB2-223ENST00000640640 AKAP4Q5JQC9 854 aa20.74■□□□□ 0.91
SCARB2-223ENST00000640640 UBAC1Q9BSL1 405 aa20.74■□□□□ 0.91
SCARB2-223ENST00000640640 MPNDQ8N594 471 aa20.74■□□□□ 0.91
SCARB2-223ENST00000640640 SPC24Q8NBT2 197 aa20.74■□□□□ 0.91
SCARB2-223ENST00000640640 NUP62CLQ9H1M0 184 aa20.74■□□□□ 0.91
SCARB2-223ENST00000640640 TRMT112Q9UI30 125 aaKnown RBP20.74■□□□□ 0.91
SCARB2-223ENST00000640640 DMRT2Q9Y5R5 561 aa20.74■□□□□ 0.91
SCARB2-223ENST00000640640 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.74■□□□□ 0.916e-6■■■■■ 38.2
SCARB2-223ENST00000640640 SYCE3A1L190 88 aa20.74■□□□□ 0.91
SCARB2-223ENST00000640640 HSP90AB3PQ58FF7 597 aa20.74■□□□□ 0.91
SCARB2-223ENST00000640640 PDILTQ8N807 584 aa20.73■□□□□ 0.91
SCARB2-223ENST00000640640 LRRC59Q96AG4 307 aaKnown RBP20.73■□□□□ 0.91
SCARB2-223ENST00000640640 ADGBQ8N7X0 1667 aa20.73■□□□□ 0.91
SCARB2-223ENST00000640640 ADAMTS2O95450 1211 aa20.73■□□□□ 0.91
SCARB2-223ENST00000640640 ATP8B2P98198 1209 aa20.72■□□□□ 0.91
SCARB2-223ENST00000640640 SLC39A6Q13433 755 aa20.72■□□□□ 0.91
SCARB2-223ENST00000640640 AEBP2Q6ZN18 517 aaPredicted RBP20.72■□□□□ 0.91
SCARB2-223ENST00000640640 EXOC5O00471 708 aa20.72■□□□□ 0.91
SCARB2-223ENST00000640640 DCTPP1Q9H773 170 aa20.72■□□□□ 0.91
SCARB2-223ENST00000640640 ZNF652Q9Y2D9 606 aa20.72■□□□□ 0.91
SCARB2-223ENST00000640640 NPHP3Q7Z494 1330 aa20.72■□□□□ 0.91
SCARB2-223ENST00000640640 KDM6BO15054 1643 aa20.72■□□□□ 0.91
SCARB2-223ENST00000640640 GPTP24298 496 aa20.72■□□□□ 0.91
SCARB2-223ENST00000640640 TXLNAP40222 546 aa20.72■□□□□ 0.91
SCARB2-223ENST00000640640 IKQ13123 557 aaPredicted RBP20.72■□□□□ 0.91
SCARB2-223ENST00000640640 C16orf71Q8IYS4 520 aaPredicted RBP20.71■□□□□ 0.91
SCARB2-223ENST00000640640 ABCA8O94911 1581 aa20.71■□□□□ 0.91
SCARB2-223ENST00000640640 PDE4CQ08493 712 aa20.71■□□□□ 0.91
SCARB2-223ENST00000640640 LARP6Q9BRS8 491 aaKnown RBP20.71■□□□□ 0.91
SCARB2-223ENST00000640640 CWC25Q9NXE8 425 aaPredicted RBP20.71■□□□□ 0.91
SCARB2-223ENST00000640640 ATP10AO60312 1499 aa20.71■□□□□ 0.91
SCARB2-223ENST00000640640 COPS6Q7L5N1 327 aa20.71■□□□□ 0.91
SCARB2-223ENST00000640640 JARID2Q92833 1246 aaPredicted RBP20.71■□□□□ 0.91
SCARB2-223ENST00000640640 IL13P35225 146 aa20.7■□□□□ 0.9
SCARB2-223ENST00000640640 XAGE3Q8WTP9 111 aa20.7■□□□□ 0.9
SCARB2-223ENST00000640640 TEX13AQ9BXU3 409 aaPredicted RBP20.7■□□□□ 0.9
SCARB2-223ENST00000640640 ESPNB1AK53 854 aa20.7■□□□□ 0.9
SCARB2-223ENST00000640640 ALDH1L1O75891 902 aa20.7■□□□□ 0.9
SCARB2-223ENST00000640640 GCP02774 474 aa20.7■□□□□ 0.9
SCARB2-223ENST00000640640 CCDC70Q6NSX1 233 aa20.7■□□□□ 0.9
SCARB2-223ENST00000640640 CEP85Q6P2H3 762 aa20.69■□□□□ 0.9
SCARB2-223ENST00000640640 KSR2Q6VAB6 950 aa20.69■□□□□ 0.9
SCARB2-223ENST00000640640 TRIM35Q9UPQ4 493 aa20.69■□□□□ 0.9
SCARB2-223ENST00000640640 RNF123Q5XPI4 1314 aa20.69■□□□□ 0.9
SCARB2-223ENST00000640640 INSRP06213 1382 aa20.69■□□□□ 0.9
SCARB2-223ENST00000640640 TRPM2O94759 1503 aa20.69■□□□□ 0.9
SCARB2-223ENST00000640640 ZMYM4Q5VZL5 1548 aa20.69■□□□□ 0.9
SCARB2-223ENST00000640640 EDC4Q6P2E9 1401 aaKnown RBP20.69■□□□□ 0.9
SCARB2-223ENST00000640640 HMGB1P09429 215 aaKnown RBP20.69■□□□□ 0.9
SCARB2-223ENST00000640640 MNS1Q8NEH6 495 aa20.69■□□□□ 0.9
SCARB2-223ENST00000640640 SCAND2PQ9GZW5 306 aaPredicted RBP20.68■□□□□ 0.9
SCARB2-223ENST00000640640 ANKRD18BA2A2Z9 1011 aa20.68■□□□□ 0.9
SCARB2-223ENST00000640640 GRM8O00222 908 aa20.68■□□□□ 0.9
SCARB2-223ENST00000640640 LDHAL6AQ6ZMR3 332 aa20.68■□□□□ 0.9
SCARB2-223ENST00000640640 GOLIM4O00461 696 aa20.68■□□□□ 0.9
SCARB2-223ENST00000640640 CCDC43Q96MW1 224 aaKnown RBP20.68■□□□□ 0.9
SCARB2-223ENST00000640640 HOXC9P31274 260 aa20.67■□□□□ 0.9
SCARB2-223ENST00000640640 MAP3K11Q16584 847 aa20.67■□□□□ 0.9
SCARB2-223ENST00000640640 NAPBQ9H115 298 aa20.67■□□□□ 0.9
SCARB2-223ENST00000640640 MSH6P52701 1360 aa20.67■□□□□ 0.9
SCARB2-223ENST00000640640 C19orf44Q9H6X5 657 aa20.67■□□□□ 0.9
SCARB2-223ENST00000640640 ZBTB7BO15156 539 aaPredicted RBP20.66■□□□□ 0.9
SCARB2-223ENST00000640640 MAP3K5Q99683 1374 aa20.66■□□□□ 0.9
SCARB2-223ENST00000640640 MAP3K12Q12852 859 aa20.66■□□□□ 0.9
SCARB2-223ENST00000640640 GPS2Q13227 327 aa20.66■□□□□ 0.9
SCARB2-223ENST00000640640 FILIP1LQ4L180 1135 aa20.66■□□□□ 0.9
SCARB2-223ENST00000640640 LINS1Q8NG48 757 aa20.66■□□□□ 0.9
SCARB2-223ENST00000640640 SNRKQ9NRH2 765 aa20.66■□□□□ 0.9
SCARB2-223ENST00000640640 BLMP54132 1417 aaPredicted RBP20.66■□□□□ 0.9
SCARB2-223ENST00000640640 BAG4O95429 457 aaKnown RBP20.66■□□□□ 0.9
SCARB2-223ENST00000640640 ZCRB1Q8TBF4 217 aaKnown RBP20.66■□□□□ 0.9
SCARB2-223ENST00000640640 KAT6BQ8WYB5 2073 aa20.65■□□□□ 0.9
SCARB2-223ENST00000640640 ATP2B2Q01814 1243 aa20.65■□□□□ 0.9
SCARB2-223ENST00000640640 CEP57L1Q8IYX8 460 aa20.65■□□□□ 0.9
SCARB2-223ENST00000640640 SERPINC1P01008 464 aa20.65■□□□□ 0.9
SCARB2-223ENST00000640640 ESYT1Q9BSJ8 1104 aa20.65■□□□□ 0.9
SCARB2-223ENST00000640640 ZNF213O14771 459 aa20.65■□□□□ 0.9
SCARB2-223ENST00000640640 SBNO2Q9Y2G9 1366 aa20.64■□□□□ 0.9
SCARB2-223ENST00000640640 CAVIN4Q5BKX8 364 aa20.64■□□□□ 0.9
SCARB2-223ENST00000640640 KLHL34Q8N239 644 aa20.64■□□□□ 0.9
SCARB2-223ENST00000640640 CABLES1Q8TDN4 633 aa20.64■□□□□ 0.9
SCARB2-223ENST00000640640 IP6K1Q92551 441 aa20.64■□□□□ 0.9
SCARB2-223ENST00000640640 HMGN5P82970 282 aaKnown RBP20.64■□□□□ 0.89
SCARB2-223ENST00000640640 WASF1Q92558 559 aa20.64■□□□□ 0.89
SCARB2-223ENST00000640640 BCL11BQ9C0K0 894 aaPredicted RBP20.64■□□□□ 0.89
SCARB2-223ENST00000640640 GDPD2Q9HCC8 539 aa20.64■□□□□ 0.89
SCARB2-223ENST00000640640 NOL7Q9UMY1 257 aaKnown RBP20.64■□□□□ 0.89
SCARB2-223ENST00000640640 MINDY4BA8MYZ0 360 aa20.63■□□□□ 0.89
SCARB2-223ENST00000640640 SEC24BO95487 1268 aa20.63■□□□□ 0.89
SCARB2-223ENST00000640640 NCBP3Q53F19 620 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms