RNA–Protein interactions for RNA: ENST00000640352.1

CNTN2-231, Transcript of contactin 2, human

TSL 5

Gene CNTN2, Length 4,000 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTN2-231	ENST00000640352	SEPT12	Q8IYM1	358 aa		10.53	□□□□□ -0.72
CNTN2-231	ENST00000640352	ZGPAT	Q8N5A5	531 aa	Known RBP	10.53	□□□□□ -0.72
CNTN2-231	ENST00000640352	LGR6	Q9HBX8	967 aa		10.53	□□□□□ -0.72
CNTN2-231	ENST00000640352	TMOD3	Q9NYL9	352 aa		10.53	□□□□□ -0.72
CNTN2-231	ENST00000640352	ZNF592	Q92610	1267 aa		10.53	□□□□□ -0.72
CNTN2-231	ENST00000640352	TRERF1	Q96PN7	1200 aa		10.53	□□□□□ -0.72
CNTN2-231	ENST00000640352	PLEKHF1	Q96S99	279 aa		10.53	□□□□□ -0.72
CNTN2-231	ENST00000640352	KIF2C	Q99661	725 aa		10.53	□□□□□ -0.72
CNTN2-231	ENST00000640352	USP6	P35125	1406 aa		10.53	□□□□□ -0.72
CNTN2-231	ENST00000640352	FAM135B	Q49AJ0	1406 aa		10.53	□□□□□ -0.72
CNTN2-231	ENST00000640352	RAB3GAP1	Q15042	981 aa		10.53	□□□□□ -0.72
CNTN2-231	ENST00000640352	CCDC27	Q2M243	656 aa		10.53	□□□□□ -0.72
CNTN2-231	ENST00000640352	SMIM5	Q71RC9	77 aa		10.53	□□□□□ -0.72
CNTN2-231	ENST00000640352	CERS3	Q8IU89	383 aa		10.53	□□□□□ -0.72
CNTN2-231	ENST00000640352	ANO2	Q9NQ90	1003 aa		10.53	□□□□□ -0.72
CNTN2-231	ENST00000640352	TAOK2	Q9UL54	1235 aa		10.53	□□□□□ -0.72
CNTN2-231	ENST00000640352	ARHGAP23	Q9P227	1491 aa		10.53	□□□□□ -0.72
CNTN2-231	ENST00000640352	BTBD11	A6QL63	1104 aa		10.52	□□□□□ -0.72
CNTN2-231	ENST00000640352	BAG4	O95429	457 aa	Known RBP	10.52	□□□□□ -0.72
CNTN2-231	ENST00000640352	HMGN5	P82970	282 aa	Known RBP	10.52	□□□□□ -0.72
CNTN2-231	ENST00000640352	ARHGEF10	O15013	1369 aa		10.52	□□□□□ -0.73
CNTN2-231	ENST00000640352	UBR1	Q8IWV7	1749 aa		10.52	□□□□□ -0.73
CNTN2-231	ENST00000640352	ALDH1L2	Q3SY69	923 aa		10.52	□□□□□ -0.73
CNTN2-231	ENST00000640352	SIRT2	Q8IXJ6	389 aa		10.52	□□□□□ -0.73
CNTN2-231	ENST00000640352	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.51	□□□□□ -0.73
CNTN2-231	ENST00000640352	SLIT1	O75093	1534 aa		10.51	□□□□□ -0.73
CNTN2-231	ENST00000640352	LRRC7	Q96NW7	1537 aa		10.51	□□□□□ -0.73
CNTN2-231	ENST00000640352	SYCE3	A1L190	88 aa		10.51	□□□□□ -0.73
CNTN2-231	ENST00000640352	ZBTB7B	O15156	539 aa	Predicted RBP	10.51	□□□□□ -0.73
CNTN2-231	ENST00000640352	MBD3	O95983	291 aa		10.51	□□□□□ -0.73
CNTN2-231	ENST00000640352	C8orf58	Q8NAV2	365 aa		10.51	□□□□□ -0.73
CNTN2-231	ENST00000640352	TRPC5	Q9UL62	973 aa	Predicted RBP	10.51	□□□□□ -0.73
CNTN2-231	ENST00000640352	SBNO2	Q9Y2G9	1366 aa		10.51	□□□□□ -0.73
CNTN2-231	ENST00000640352	MYOM1	P52179	1685 aa		10.51	□□□□□ -0.73
CNTN2-231	ENST00000640352	CBX1	P83916	185 aa		10.51	□□□□□ -0.73
CNTN2-231	ENST00000640352	GNAT3	A8MTJ3	354 aa		10.5	□□□□□ -0.73
CNTN2-231	ENST00000640352	GPATCH11	Q8N954	259 aa		10.5	□□□□□ -0.73
CNTN2-231	ENST00000640352	DIAPH3	Q9NSV4	1193 aa		10.5	□□□□□ -0.73
CNTN2-231	ENST00000640352	IQGAP1	P46940	1657 aa		10.5	□□□□□ -0.73
CNTN2-231	ENST00000640352	CCDC66	A2RUB6	948 aa		10.5	□□□□□ -0.73
CNTN2-231	ENST00000640352	APBA3	O96018	575 aa		10.5	□□□□□ -0.73
CNTN2-231	ENST00000640352	FKBP5	Q13451	457 aa	Predicted RBP	10.5	□□□□□ -0.73
CNTN2-231	ENST00000640352	BMP2KL	Q5H9B9	411 aa		10.5	□□□□□ -0.73
CNTN2-231	ENST00000640352	UNC5CL	Q8IV45	518 aa		10.5	□□□□□ -0.73
CNTN2-231	ENST00000640352	TSPY26P	Q9H489	355 aa		10.5	□□□□□ -0.73
CNTN2-231	ENST00000640352	LAMC1	P11047	1609 aa		10.5	□□□□□ -0.73
CNTN2-231	ENST00000640352	EDC4	Q6P2E9	1401 aa	Known RBP	10.5	□□□□□ -0.73
CNTN2-231	ENST00000640352	FLT4	P35916	1363 aa		10.5	□□□□□ -0.73
CNTN2-231	ENST00000640352	GSPT1	P15170	499 aa	Known RBP	10.5	□□□□□ -0.73
CNTN2-231	ENST00000640352	NEK4	P51957	841 aa		10.5	□□□□□ -0.73
CNTN2-231	ENST00000640352	NFE2L2	Q16236	605 aa		10.5	□□□□□ -0.73
CNTN2-231	ENST00000640352	AK9	Q5TCS8	1911 aa		10.5	□□□□□ -0.73
CNTN2-231	ENST00000640352	KCNQ2	O43526	872 aa		10.49	□□□□□ -0.73
CNTN2-231	ENST00000640352	JARID2	Q92833	1246 aa	Predicted RBP	10.49	□□□□□ -0.73
CNTN2-231	ENST00000640352	GDPD2	Q9HCC8	539 aa		10.49	□□□□□ -0.73
CNTN2-231	ENST00000640352	MBIP	Q9NS73	344 aa		10.49	□□□□□ -0.73
CNTN2-231	ENST00000640352	NSD2	O96028	1365 aa		10.49	□□□□□ -0.73
CNTN2-231	ENST00000640352	VAMP4	O75379	141 aa		10.49	□□□□□ -0.73
CNTN2-231	ENST00000640352	IFNL2	Q8IZJ0	200 aa		10.49	□□□□□ -0.73
CNTN2-231	ENST00000640352	JCAD	Q9P266	1359 aa		10.49	□□□□□ -0.73
CNTN2-231	ENST00000640352	TAF3	Q5VWG9	929 aa		10.49	□□□□□ -0.73
CNTN2-231	ENST00000640352	ATP6V1D	Q9Y5K8	247 aa		10.49	□□□□□ -0.73
CNTN2-231	ENST00000640352	CCDC24	Q8N4L8	307 aa		10.49	□□□□□ -0.73
CNTN2-231	ENST00000640352	LARP6	Q9BRS8	491 aa	Known RBP	10.49	□□□□□ -0.73
CNTN2-231	ENST00000640352	CWC22	Q9HCG8	908 aa	Known RBP	10.49	□□□□□ -0.73
CNTN2-231	ENST00000640352	IFT57	Q9NWB7	429 aa		10.49	□□□□□ -0.73
CNTN2-231	ENST00000640352	HDAC5	Q9UQL6	1122 aa		10.49	□□□□□ -0.73
CNTN2-231	ENST00000640352	SNX21	Q969T3	373 aa		10.48	□□□□□ -0.73
CNTN2-231	ENST00000640352	GPATCH3	Q96I76	525 aa		10.48	□□□□□ -0.73
CNTN2-231	ENST00000640352	RBSN	Q9H1K0	784 aa		10.48	□□□□□ -0.73
CNTN2-231	ENST00000640352	SASS6	Q6UVJ0	657 aa		10.48	□□□□□ -0.73
CNTN2-231	ENST00000640352	MST1R	Q04912	1400 aa		10.48	□□□□□ -0.73
CNTN2-231	ENST00000640352	MRPL50	Q8N5N7	158 aa	Known RBP	10.48	□□□□□ -0.73
CNTN2-231	ENST00000640352	ZNF219	Q9P2Y4	722 aa	Predicted RBP	10.48	□□□□□ -0.73
CNTN2-231	ENST00000640352	IL16	Q14005	1332 aa		10.47	□□□□□ -0.73
CNTN2-231	ENST00000640352	IL13	P35225	146 aa		10.47	□□□□□ -0.73
CNTN2-231	ENST00000640352	NSFL1C	Q9UNZ2	370 aa	Known RBP	10.47	□□□□□ -0.73
CNTN2-231	ENST00000640352	ERBB3	P21860	1342 aa		10.47	□□□□□ -0.73
CNTN2-231	ENST00000640352	SOS2	Q07890	1332 aa	Predicted RBP	10.47	□□□□□ -0.73
CNTN2-231	ENST00000640352	KCNQ3	O43525	872 aa		10.47	□□□□□ -0.73
CNTN2-231	ENST00000640352	KLHL40	Q2TBA0	621 aa		10.47	□□□□□ -0.73
CNTN2-231	ENST00000640352	ZSCAN23	Q3MJ62	389 aa		10.47	□□□□□ -0.73
CNTN2-231	ENST00000640352	PLEKHM2	Q8IWE5	1019 aa		10.47	□□□□□ -0.73
CNTN2-231	ENST00000640352	RPAP2	Q8IXW5	612 aa	Predicted RBP	10.47	□□□□□ -0.73
CNTN2-231	ENST00000640352	SPC24	Q8NBT2	197 aa		10.47	□□□□□ -0.73
CNTN2-231	ENST00000640352	SECISBP2L	Q93073	1101 aa	Known RBP	10.47	□□□□□ -0.73
CNTN2-231	ENST00000640352		F6X3S4	739 aa		10.46	□□□□□ -0.73
CNTN2-231	ENST00000640352	OFD1	O75665	1012 aa		10.46	□□□□□ -0.73
CNTN2-231	ENST00000640352	MCM2	P49736	904 aa		10.46	□□□□□ -0.73
CNTN2-231	ENST00000640352	HDGFL1	Q5TGJ6	251 aa		10.46	□□□□□ -0.73
CNTN2-231	ENST00000640352	DEFB132	Q7Z7B7	95 aa		10.46	□□□□□ -0.73
CNTN2-231	ENST00000640352	GJD4	Q96KN9	370 aa	Predicted RBP	10.46	□□□□□ -0.73
CNTN2-231	ENST00000640352	KIF3A	Q9Y496	699 aa		10.46	□□□□□ -0.73
CNTN2-231	ENST00000640352	CLGN	O14967	610 aa		10.46	□□□□□ -0.73
CNTN2-231	ENST00000640352	SLC4A2	P04920	1241 aa		10.46	□□□□□ -0.73
CNTN2-231	ENST00000640352	ZNF772	Q68DY9	489 aa	Predicted RBP	10.46	□□□□□ -0.73
CNTN2-231	ENST00000640352	ERC2	O15083	957 aa		10.46	□□□□□ -0.74
CNTN2-231	ENST00000640352	DDIT3	P35638	169 aa		10.46	□□□□□ -0.74
CNTN2-231	ENST00000640352	ATP6V1A	P38606	617 aa		10.46	□□□□□ -0.74
CNTN2-231	ENST00000640352	IQSEC2	Q5JU85	1478 aa		10.45	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms