RNA–Protein interactions for RNA: ENST00000639888.1

SPIN3-230, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 4,299 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-230ENST00000639888 LIMCH1Q9UPQ0 1083 aa12.99□□□□□ -0.33
SPIN3-230ENST00000639888 ITSN2Q9NZM3 1697 aa12.98□□□□□ -0.33
SPIN3-230ENST00000639888 BRD1O95696 1058 aa12.98□□□□□ -0.33
SPIN3-230ENST00000639888 RNF187Q5TA31 235 aaPredicted RBP12.98□□□□□ -0.33
SPIN3-230ENST00000639888 CRACR2AQ9BSW2 395 aa12.98□□□□□ -0.33
SPIN3-230ENST00000639888 CARD6Q9BX69 1037 aa12.98□□□□□ -0.33
SPIN3-230ENST00000639888 BLMP54132 1417 aaPredicted RBP12.98□□□□□ -0.33
SPIN3-230ENST00000639888 ZSCAN12O43309 604 aa12.98□□□□□ -0.33
SPIN3-230ENST00000639888 DHX16O60231 1041 aaKnown RBP12.98□□□□□ -0.33
SPIN3-230ENST00000639888 SARNPP82979 210 aaKnown RBP12.98□□□□□ -0.33
SPIN3-230ENST00000639888 CAGE1Q8TC20 777 aa12.98□□□□□ -0.33
SPIN3-230ENST00000639888 ANKRD7Q92527 254 aa12.98□□□□□ -0.33
SPIN3-230ENST00000639888 ANO10Q9NW15 660 aa12.98□□□□□ -0.33
SPIN3-230ENST00000639888 F13A1P00488 732 aa12.97□□□□□ -0.33
SPIN3-230ENST00000639888 AKAP17AQ02040 695 aaKnown RBP12.97□□□□□ -0.33
SPIN3-230ENST00000639888 ZNF75DP51815 510 aa12.97□□□□□ -0.33
SPIN3-230ENST00000639888 GYS2P54840 703 aa12.97□□□□□ -0.33
SPIN3-230ENST00000639888 KIF4BQ2VIQ3 1234 aa12.97□□□□□ -0.33
SPIN3-230ENST00000639888 CEP57Q86XR8 500 aa12.97□□□□□ -0.33
SPIN3-230ENST00000639888 TERF2IPQ9NYB0 399 aa12.97□□□□□ -0.33
SPIN3-230ENST00000639888 LIG1P18858 919 aa12.97□□□□□ -0.33
SPIN3-230ENST00000639888 CWC27Q6UX04 472 aaKnown RBP12.97□□□□□ -0.33
SPIN3-230ENST00000639888 HDGFL2Q7Z4V5 671 aaPredicted RBP12.97□□□□□ -0.33
SPIN3-230ENST00000639888 SPTLC3Q9NUV7 552 aa12.97□□□□□ -0.33
SPIN3-230ENST00000639888 CBX8Q9HC52 389 aa12.96□□□□□ -0.33
SPIN3-230ENST00000639888 IL1RAPL2Q9NP60 686 aa12.96□□□□□ -0.33
SPIN3-230ENST00000639888 TSR1Q2NL82 804 aaKnown RBP12.96□□□□□ -0.33
SPIN3-230ENST00000639888 PLEKHM2Q8IWE5 1019 aa12.96□□□□□ -0.33
SPIN3-230ENST00000639888 GBP3Q9H0R5 595 aa12.96□□□□□ -0.33
SPIN3-230ENST00000639888 ZCCHC17Q9NP64 241 aaKnown RBP12.96□□□□□ -0.33
SPIN3-230ENST00000639888 PRKAR2BP31323 418 aa12.96□□□□□ -0.33
SPIN3-230ENST00000639888 LRCH2Q5VUJ6 765 aa12.96□□□□□ -0.33
SPIN3-230ENST00000639888 OLFM4Q6UX06 510 aa12.96□□□□□ -0.33
SPIN3-230ENST00000639888 RPAP2Q8IXW5 612 aaPredicted RBP12.96□□□□□ -0.33
SPIN3-230ENST00000639888 RNF216Q9NWF9 866 aaPredicted RBP12.96□□□□□ -0.33
SPIN3-230ENST00000639888 ADGRL2O95490 1459 aa12.96□□□□□ -0.34
SPIN3-230ENST00000639888 BIN1O00499 593 aa12.96□□□□□ -0.34
SPIN3-230ENST00000639888 PPP2R5AQ15172 486 aa12.96□□□□□ -0.34
SPIN3-230ENST00000639888 ISM2Q6H9L7 571 aa12.96□□□□□ -0.34
SPIN3-230ENST00000639888 RPAINQ86UA6 219 aa12.96□□□□□ -0.34
SPIN3-230ENST00000639888 NCAPGQ9BPX3 1015 aa12.96□□□□□ -0.34
SPIN3-230ENST00000639888 RABEP2Q9H5N1 569 aa12.96□□□□□ -0.34
SPIN3-230ENST00000639888 PPP6R1Q9UPN7 881 aa12.96□□□□□ -0.34
SPIN3-230ENST00000639888 EIF4G3O43432 1585 aaKnown RBP12.96□□□□□ -0.34
SPIN3-230ENST00000639888 KDM5BQ9UGL1 1544 aa12.95□□□□□ -0.34
SPIN3-230ENST00000639888 EBAG9O00559 213 aa12.95□□□□□ -0.34
SPIN3-230ENST00000639888 SYT1P21579 422 aa12.95□□□□□ -0.34
SPIN3-230ENST00000639888 BRPF1P55201 1214 aaPredicted RBP12.95□□□□□ -0.34
SPIN3-230ENST00000639888 VGFO15240 615 aaPredicted RBP12.95□□□□□ -0.34
SPIN3-230ENST00000639888 SYCP1Q15431 976 aa12.95□□□□□ -0.34
SPIN3-230ENST00000639888 GOLGA5Q8TBA6 731 aa12.95□□□□□ -0.34
SPIN3-230ENST00000639888 SURF6O75683 361 aaKnown RBP12.95□□□□□ -0.34
SPIN3-230ENST00000639888 SEC31AO94979 1220 aaKnown RBP12.95□□□□□ -0.34
SPIN3-230ENST00000639888 CCDC12Q8WUD4 166 aaPredicted RBP12.95□□□□□ -0.34
SPIN3-230ENST00000639888 INTS4Q96HW7 963 aaKnown RBP12.94□□□□□ -0.34
SPIN3-230ENST00000639888 BRMS1Q9HCU9 246 aa12.94□□□□□ -0.34
SPIN3-230ENST00000639888 CFAP45Q9UL16 551 aa12.94□□□□□ -0.34
SPIN3-230ENST00000639888 FAM173BQ6P4H8 233 aa12.94□□□□□ -0.34
SPIN3-230ENST00000639888 SYNE3Q6ZMZ3 975 aa12.94□□□□□ -0.34
SPIN3-230ENST00000639888 CNTROBQ8N137 903 aa12.94□□□□□ -0.34
SPIN3-230ENST00000639888 NECAB1Q8N987 351 aa12.94□□□□□ -0.34
SPIN3-230ENST00000639888 OTUD7AQ8TE49 926 aaPredicted RBP12.94□□□□□ -0.34
SPIN3-230ENST00000639888 NEBLO76041 1014 aa12.94□□□□□ -0.34
SPIN3-230ENST00000639888 NBPF11Q86T75 865 aa12.94□□□□□ -0.34
SPIN3-230ENST00000639888 ESF1Q9H501 851 aaKnown RBP12.94□□□□□ -0.34
SPIN3-230ENST00000639888 STK38Q15208 465 aa12.93□□□□□ -0.34
SPIN3-230ENST00000639888 DNAJC21Q5F1R6 531 aaKnown RBP12.93□□□□□ -0.34
SPIN3-230ENST00000639888 CACTINQ8WUQ7 758 aaKnown RBP12.93□□□□□ -0.34
SPIN3-230ENST00000639888 ZSCAN31Q96LW9 406 aaPredicted RBP12.93□□□□□ -0.34
SPIN3-230ENST00000639888 IPO7O95373 1038 aaKnown RBP12.93□□□□□ -0.34
SPIN3-230ENST00000639888 PNMA6AP0CW24 399 aaPredicted RBP12.93□□□□□ -0.34
SPIN3-230ENST00000639888 CLCN6P51797 869 aa12.93□□□□□ -0.34
SPIN3-230ENST00000639888 STX1AQ16623 288 aa12.93□□□□□ -0.34
SPIN3-230ENST00000639888 ANKRD36BQ8N2N9 1353 aa12.93□□□□□ -0.34
SPIN3-230ENST00000639888 UHRF1BP1Q6BDS2 1440 aa12.93□□□□□ -0.34
SPIN3-230ENST00000639888 TOP1P11387 765 aaKnown RBP12.93□□□□□ -0.34
SPIN3-230ENST00000639888 PSMA5P28066 241 aa12.93□□□□□ -0.34
SPIN3-230ENST00000639888 PRAG1Q86YV5 1406 aa12.93□□□□□ -0.34
SPIN3-230ENST00000639888 TRMT2AQ8IZ69 625 aaKnown RBP12.93□□□□□ -0.34
SPIN3-230ENST00000639888 TESK2Q96S53 571 aa12.93□□□□□ -0.34
SPIN3-230ENST00000639888 CCDC9Q9Y3X0 531 aaKnown RBP12.93□□□□□ -0.34
SPIN3-230ENST00000639888 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.93□□□□□ -0.34
SPIN3-230ENST00000639888 GBP2P32456 591 aaPredicted RBP12.93□□□□□ -0.34
SPIN3-230ENST00000639888 AOPEPQ8N6M6 819 aa12.93□□□□□ -0.34
SPIN3-230ENST00000639888 ZNF521Q96K83 1311 aa12.92□□□□□ -0.34
SPIN3-230ENST00000639888 CYP2C19P33261 490 aa12.92□□□□□ -0.34
SPIN3-230ENST00000639888 LRRIQ1Q96JM4 1722 aa12.92□□□□□ -0.34
SPIN3-230ENST00000639888 SCAPERQ9BY12 1400 aa12.92□□□□□ -0.34
SPIN3-230ENST00000639888 PUF60Q9UHX1 559 aaKnown RBP12.92□□□□□ -0.34
SPIN3-230ENST00000639888 ZMYM3Q14202 1370 aa12.92□□□□□ -0.34
SPIN3-230ENST00000639888 ERLIN2O94905 339 aa12.92□□□□□ -0.34
SPIN3-230ENST00000639888 SSR1P43307 286 aaKnown RBP12.92□□□□□ -0.34
SPIN3-230ENST00000639888 LIG3P49916 1009 aa12.92□□□□□ -0.34
SPIN3-230ENST00000639888 CCDC150Q8NCX0 1101 aa12.92□□□□□ -0.34
SPIN3-230ENST00000639888 CAVIN2O95810 425 aa12.91□□□□□ -0.34
SPIN3-230ENST00000639888 IFIT2P09913 472 aaKnown RBP12.91□□□□□ -0.34
SPIN3-230ENST00000639888 PPP2R3AQ06190 1150 aa12.91□□□□□ -0.34
SPIN3-230ENST00000639888 ALDH1L2Q3SY69 923 aa12.91□□□□□ -0.34
SPIN3-230ENST00000639888 FAM212AQ96EL1 285 aa12.91□□□□□ -0.34
SPIN3-230ENST00000639888 RAI14Q9P0K7 980 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms