RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 APBB1IPQ7Z5R6 666 aaPredicted RBP9.92□□□□□ -0.82
NECAP1-220ENST00000639841 SMC5Q8IY18 1101 aa9.92□□□□□ -0.82
NECAP1-220ENST00000639841 RNF34Q969K3 372 aa9.92□□□□□ -0.82
NECAP1-220ENST00000639841 CFDP1Q9UEE9 299 aaPredicted RBP9.92□□□□□ -0.82
NECAP1-220ENST00000639841 DNMT3AQ9Y6K1 912 aaPredicted RBP9.92□□□□□ -0.82
NECAP1-220ENST00000639841 DNMT1P26358 1616 aaKnown RBP9.92□□□□□ -0.82
NECAP1-220ENST00000639841 PZPP20742 1482 aa9.92□□□□□ -0.82
NECAP1-220ENST00000639841 PLEKHG6Q3KR16 790 aa9.92□□□□□ -0.82
NECAP1-220ENST00000639841 SLFNL1Q499Z3 407 aa9.92□□□□□ -0.82
NECAP1-220ENST00000639841 MS4A3Q96HJ5 214 aa9.92□□□□□ -0.82
NECAP1-220ENST00000639841 METTL5Q9NRN9 209 aaKnown RBP9.92□□□□□ -0.82
NECAP1-220ENST00000639841 FAM198AQ9UFP1 575 aa9.92□□□□□ -0.82
NECAP1-220ENST00000639841 SYNMO15061 1565 aa9.91□□□□□ -0.82
NECAP1-220ENST00000639841 ZC3H13Q5T200 1668 aaKnown RBP9.91□□□□□ -0.82
NECAP1-220ENST00000639841 HSD3B2P26439 372 aa9.91□□□□□ -0.82
NECAP1-220ENST00000639841 HSP90AB4PQ58FF6 505 aa9.91□□□□□ -0.82
NECAP1-220ENST00000639841 C6orf132Q5T0Z8 1188 aa9.91□□□□□ -0.82
NECAP1-220ENST00000639841 RNF135Q8IUD6 432 aa9.91□□□□□ -0.82
NECAP1-220ENST00000639841 GTF3C2Q8WUA4 911 aaPredicted RBP9.91□□□□□ -0.82
NECAP1-220ENST00000639841 GABBR1Q9UBS5 961 aa9.91□□□□□ -0.82
NECAP1-220ENST00000639841 BMS1Q14692 1282 aaKnown RBP9.9□□□□□ -0.82
NECAP1-220ENST00000639841 PRIMPOLQ96LW4 560 aa9.9□□□□□ -0.82
NECAP1-220ENST00000639841 PCDH12Q9NPG4 1184 aa9.9□□□□□ -0.82
NECAP1-220ENST00000639841 SEPT3Q9UH03 358 aa9.9□□□□□ -0.82
NECAP1-220ENST00000639841 MTUS2Q5JR59 1369 aa9.9□□□□□ -0.82
NECAP1-220ENST00000639841 CENPBP07199 599 aaPredicted RBP9.9□□□□□ -0.83
NECAP1-220ENST00000639841 CLDN10P78369 228 aa9.9□□□□□ -0.83
NECAP1-220ENST00000639841 KCNH2Q12809 1159 aa9.9□□□□□ -0.83
NECAP1-220ENST00000639841 HSP90AB2PQ58FF8 381 aa9.9□□□□□ -0.83
NECAP1-220ENST00000639841 IRF2BPLQ9H1B7 796 aa9.9□□□□□ -0.83
NECAP1-220ENST00000639841 DHX29Q7Z478 1369 aaKnown RBP9.9□□□□□ -0.83
NECAP1-220ENST00000639841 TNRQ92752 1358 aa9.9□□□□□ -0.83
NECAP1-220ENST00000639841 MED14O60244 1454 aa9.89□□□□□ -0.83
NECAP1-220ENST00000639841 SHANK2Q9UPX8 1470 aa9.89□□□□□ -0.83
NECAP1-220ENST00000639841 MED1Q15648 1581 aaPredicted RBP9.89□□□□□ -0.83
NECAP1-220ENST00000639841 PER1O15534 1290 aaPredicted RBP9.89□□□□□ -0.83
NECAP1-220ENST00000639841 DKK1O94907 266 aa9.89□□□□□ -0.83
NECAP1-220ENST00000639841 PRSS12P56730 875 aa9.89□□□□□ -0.83
NECAP1-220ENST00000639841 TMC7Q7Z402 723 aa9.89□□□□□ -0.83
NECAP1-220ENST00000639841 ZNF594Q96JF6 807 aaPredicted RBP9.89□□□□□ -0.83
NECAP1-220ENST00000639841 PARP2Q9UGN5 583 aa9.89□□□□□ -0.83
NECAP1-220ENST00000639841 CEP162Q5TB80 1403 aa9.89□□□□□ -0.83
NECAP1-220ENST00000639841 U2SURPO15042 1029 aaKnown RBP9.88□□□□□ -0.83
NECAP1-220ENST00000639841 OGFOD1Q8N543 542 aa9.88□□□□□ -0.83
NECAP1-220ENST00000639841 ZCRB1Q8TBF4 217 aaKnown RBP9.88□□□□□ -0.83
NECAP1-220ENST00000639841 STAG1Q8WVM7 1258 aa9.88□□□□□ -0.83
NECAP1-220ENST00000639841 IFT57Q9NWB7 429 aa9.88□□□□□ -0.83
NECAP1-220ENST00000639841 ZNF335Q9H4Z2 1342 aaPredicted RBP9.88□□□□□ -0.83
NECAP1-220ENST00000639841 CCDC141Q6ZP82 1450 aa9.88□□□□□ -0.83
NECAP1-220ENST00000639841 TIAM1Q13009 1591 aa9.88□□□□□ -0.83
NECAP1-220ENST00000639841 THEMISQ8N1K5 641 aaPredicted RBP9.88□□□□□ -0.83
NECAP1-220ENST00000639841 CDCA7LQ96GN5 454 aa9.88□□□□□ -0.83
NECAP1-220ENST00000639841 SGSM3Q96HU1 749 aa9.88□□□□□ -0.83
NECAP1-220ENST00000639841 ZRANB1Q9UGI0 708 aa9.88□□□□□ -0.83
NECAP1-220ENST00000639841 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.88□□□□□ -0.83
NECAP1-220ENST00000639841 ARHGEF5Q12774 1597 aa9.87□□□□□ -0.83
NECAP1-220ENST00000639841 A0A0U1RQG5 324 aaPredicted RBP9.87□□□□□ -0.83
NECAP1-220ENST00000639841 FMR1Q06787 632 aaKnown RBP eCLIP9.87□□□□□ -0.83
NECAP1-220ENST00000639841 RNF187Q5TA31 235 aaPredicted RBP9.87□□□□□ -0.83
NECAP1-220ENST00000639841 RNF17Q9BXT8 1623 aaKnown RBP9.87□□□□□ -0.83
NECAP1-220ENST00000639841 EIF2AK4Q9P2K8 1649 aaKnown RBP9.87□□□□□ -0.83
NECAP1-220ENST00000639841 NEURL4Q96JN8 1562 aa9.87□□□□□ -0.83
NECAP1-220ENST00000639841 C3orf80F5H4A9 247 aa9.86□□□□□ -0.83
NECAP1-220ENST00000639841 TIE1P35590 1138 aa9.86□□□□□ -0.83
NECAP1-220ENST00000639841 USP46P62068 366 aa9.86□□□□□ -0.83
NECAP1-220ENST00000639841 FKBP4Q02790 459 aaKnown RBP eCLIP9.86□□□□□ -0.83
NECAP1-220ENST00000639841 SPTY2D1Q68D10 685 aaPredicted RBP9.86□□□□□ -0.83
NECAP1-220ENST00000639841 ANKLE2Q86XL3 938 aa9.86□□□□□ -0.83
NECAP1-220ENST00000639841 MBD5Q9P267 1494 aa9.86□□□□□ -0.83
NECAP1-220ENST00000639841 FMNL1O95466 1100 aaPredicted RBP9.86□□□□□ -0.83
NECAP1-220ENST00000639841 NEFLP07196 543 aa9.86□□□□□ -0.83
NECAP1-220ENST00000639841 ZNF76P36508 570 aa9.86□□□□□ -0.83
NECAP1-220ENST00000639841 HNRNPMP52272 730 aaKnown RBP eCLIP9.86□□□□□ -0.83
NECAP1-220ENST00000639841 GNL2Q13823 731 aaKnown RBP9.86□□□□□ -0.83
NECAP1-220ENST00000639841 CAPN12Q6ZSI9 719 aa9.86□□□□□ -0.83
NECAP1-220ENST00000639841 FILIP1Q7Z7B0 1213 aa9.86□□□□□ -0.83
NECAP1-220ENST00000639841 TRIM35Q9UPQ4 493 aa9.86□□□□□ -0.83
NECAP1-220ENST00000639841 GGT6Q6P531 493 aa9.85□□□□□ -0.83
NECAP1-220ENST00000639841 TMC4Q7Z404 712 aa9.85□□□□□ -0.83
NECAP1-220ENST00000639841 DUSP9Q99956 384 aaKnown RBP9.85□□□□□ -0.83
NECAP1-220ENST00000639841 IQGAP1P46940 1657 aa9.85□□□□□ -0.83
NECAP1-220ENST00000639841 VWDEQ8N2E2 1590 aa9.85□□□□□ -0.83
NECAP1-220ENST00000639841 UGGT1Q9NYU2 1555 aa9.85□□□□□ -0.83
NECAP1-220ENST00000639841 POTEB2H3BUK9 544 aa9.84□□□□□ -0.83
NECAP1-220ENST00000639841 TREHO43280 583 aa9.84□□□□□ -0.83
NECAP1-220ENST00000639841 XPCQ01831 940 aaPredicted RBP9.84□□□□□ -0.83
NECAP1-220ENST00000639841 ARID5AQ03989 594 aa9.84□□□□□ -0.83
NECAP1-220ENST00000639841 RALBP1Q15311 655 aa9.84□□□□□ -0.83
NECAP1-220ENST00000639841 MCF2L2Q86YR7 1114 aa9.84□□□□□ -0.83
NECAP1-220ENST00000639841 G3BP2Q9UN86 482 aaKnown RBP9.84□□□□□ -0.83
NECAP1-220ENST00000639841 NPHP4O75161 1426 aaPredicted RBP9.84□□□□□ -0.83
NECAP1-220ENST00000639841 MAST1Q9Y2H9 1570 aa9.84□□□□□ -0.83
NECAP1-220ENST00000639841 ZBBXA8MT70 800 aa9.84□□□□□ -0.83
NECAP1-220ENST00000639841 PPFIA4O75335 1185 aa9.84□□□□□ -0.83
NECAP1-220ENST00000639841 SOGA3Q5TF21 947 aa9.84□□□□□ -0.83
NECAP1-220ENST00000639841 RDH13Q8NBN7 331 aa9.84□□□□□ -0.83
NECAP1-220ENST00000639841 RBCK1Q9BYM8 510 aa9.84□□□□□ -0.83
NECAP1-220ENST00000639841 TMEM134Q9H6X4 195 aa9.84□□□□□ -0.83
NECAP1-220ENST00000639841 KIAA1024Q9UPX6 916 aa9.84□□□□□ -0.83
NECAP1-220ENST00000639841 MIA2Q96PC5 1412 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms