RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 C16orf45Q96MC5 204 aaPredicted RBP6.72□□□□□ -1.33
SCARB2-218ENST00000639715 C3P01024 1663 aa6.72□□□□□ -1.33
SCARB2-218ENST00000639715 PTPRCP08575 1304 aa6.72□□□□□ -1.33
SCARB2-218ENST00000639715 RDXP35241 583 aaKnown RBP6.71□□□□□ -1.33
SCARB2-218ENST00000639715 PSME1Q06323 249 aa6.71□□□□□ -1.33
SCARB2-218ENST00000639715 THEMISQ8N1K5 641 aaPredicted RBP6.71□□□□□ -1.33
SCARB2-218ENST00000639715 IQGAP3Q86VI3 1631 aa6.71□□□□□ -1.33
SCARB2-218ENST00000639715 RLBP1P12271 317 aa6.71□□□□□ -1.34
SCARB2-218ENST00000639715 CASQ1P31415 396 aa6.71□□□□□ -1.34
SCARB2-218ENST00000639715 G3BP1Q13283 466 aaKnown RBP eCLIP6.71□□□□□ -1.34
SCARB2-218ENST00000639715 CNTROBQ8N137 903 aa6.71□□□□□ -1.34
SCARB2-218ENST00000639715 THUMPD2Q9BTF0 503 aaKnown RBP6.71□□□□□ -1.34
SCARB2-218ENST00000639715 MYOM2P54296 1465 aa6.71□□□□□ -1.34
SCARB2-218ENST00000639715 SURF6O75683 361 aaKnown RBP6.71□□□□□ -1.34
SCARB2-218ENST00000639715 ARID4AP29374 1257 aaPredicted RBP6.71□□□□□ -1.34
SCARB2-218ENST00000639715 USP8P40818 1118 aa6.71□□□□□ -1.34
SCARB2-218ENST00000639715 NME9Q86XW9 330 aa6.71□□□□□ -1.34
SCARB2-218ENST00000639715 CLASRPQ8N2M8 674 aaKnown RBP6.71□□□□□ -1.34
SCARB2-218ENST00000639715 DNAAF4Q8WXU2 420 aa6.71□□□□□ -1.34
SCARB2-218ENST00000639715 PHF23Q9BUL5 403 aaPredicted RBP6.71□□□□□ -1.34
SCARB2-218ENST00000639715 FEZ2Q9UHY8 353 aaPredicted RBP6.71□□□□□ -1.34
SCARB2-218ENST00000639715 SMC3Q9UQE7 1217 aa6.71□□□□□ -1.34
SCARB2-218ENST00000639715 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.71□□□□□ -1.34
SCARB2-218ENST00000639715 EMILIN1Q9Y6C2 1016 aa6.71□□□□□ -1.34
SCARB2-218ENST00000639715 FBXO31Q5XUX0 539 aaPredicted RBP6.71□□□□□ -1.34
SCARB2-218ENST00000639715 NECTIN2Q92692 538 aa6.71□□□□□ -1.34
SCARB2-218ENST00000639715 SNX21Q969T3 373 aa6.71□□□□□ -1.34
SCARB2-218ENST00000639715 JRKLQ9Y4A0 524 aa6.71□□□□□ -1.34
SCARB2-218ENST00000639715 ABCC1P33527 1531 aa6.71□□□□□ -1.34
SCARB2-218ENST00000639715 GNL2Q13823 731 aaKnown RBP6.7□□□□□ -1.34
SCARB2-218ENST00000639715 E2F4Q16254 413 aa6.7□□□□□ -1.34
SCARB2-218ENST00000639715 LRSAM1Q6UWE0 723 aa6.7□□□□□ -1.34
SCARB2-218ENST00000639715 ZBTB40Q9NUA8 1239 aa6.7□□□□□ -1.34
SCARB2-218ENST00000639715 LRRFIP2Q9Y608 721 aaKnown RBP6.7□□□□□ -1.34
SCARB2-218ENST00000639715 TTC21BQ7Z4L5 1316 aa6.7□□□□□ -1.34
SCARB2-218ENST00000639715 UNC13BO14795 1591 aa6.7□□□□□ -1.34
SCARB2-218ENST00000639715 ADCY5O95622 1261 aa6.7□□□□□ -1.34
SCARB2-218ENST00000639715 MAP2K2P36507 400 aa6.7□□□□□ -1.34
SCARB2-218ENST00000639715 ATP6V1AP38606 617 aa6.7□□□□□ -1.34
SCARB2-218ENST00000639715 RAB3GAP1Q15042 981 aa6.7□□□□□ -1.34
SCARB2-218ENST00000639715 LRRFIP1Q32MZ4 808 aaKnown RBP6.7□□□□□ -1.34
SCARB2-218ENST00000639715 PLEKHO1Q53GL0 409 aaPredicted RBP6.7□□□□□ -1.34
SCARB2-218ENST00000639715 ERC1Q8IUD2 1116 aa6.7□□□□□ -1.34
SCARB2-218ENST00000639715 ZNF710Q8N1W2 664 aa6.7□□□□□ -1.34
SCARB2-218ENST00000639715 TRPM1Q7Z4N2 1603 aa6.7□□□□□ -1.34
SCARB2-218ENST00000639715 HIP1O00291 1037 aa6.7□□□□□ -1.34
SCARB2-218ENST00000639715 DHX16O60231 1041 aaKnown RBP6.7□□□□□ -1.34
SCARB2-218ENST00000639715 ZNF445P59923 1031 aa6.7□□□□□ -1.34
SCARB2-218ENST00000639715 HDGFL1Q5TGJ6 251 aa6.7□□□□□ -1.34
SCARB2-218ENST00000639715 CREBRFQ8IUR6 639 aa6.7□□□□□ -1.34
SCARB2-218ENST00000639715 ABTB2Q8N961 1025 aa6.7□□□□□ -1.34
SCARB2-218ENST00000639715 BRMS1Q9HCU9 246 aa6.7□□□□□ -1.34
SCARB2-218ENST00000639715 MBIPQ9NS73 344 aa6.7□□□□□ -1.34
SCARB2-218ENST00000639715 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.7□□□□□ -1.34
SCARB2-218ENST00000639715 V9GYY5 206 aaPredicted RBP6.7□□□□□ -1.34
SCARB2-218ENST00000639715 NHSL1Q5SYE7 1610 aa6.7□□□□□ -1.34
SCARB2-218ENST00000639715 SATB1Q01826 763 aa6.69□□□□□ -1.34
SCARB2-218ENST00000639715 PPP2R5AQ15172 486 aa6.69□□□□□ -1.34
SCARB2-218ENST00000639715 GORABQ5T7V8 394 aa6.69□□□□□ -1.34
SCARB2-218ENST00000639715 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.69□□□□□ -1.34
SCARB2-218ENST00000639715 ZNF397Q8NF99 534 aaPredicted RBP6.69□□□□□ -1.34
SCARB2-218ENST00000639715 GTF3C6Q969F1 213 aa6.69□□□□□ -1.34
SCARB2-218ENST00000639715 A0A1W2PP64 1363 aa6.69□□□□□ -1.34
SCARB2-218ENST00000639715 ZNF853P0CG23 659 aa6.69□□□□□ -1.34
SCARB2-218ENST00000639715 RAD51AP2Q09MP3 1159 aa6.69□□□□□ -1.34
SCARB2-218ENST00000639715 RPAINQ86UA6 219 aa6.69□□□□□ -1.34
SCARB2-218ENST00000639715 FAM184AQ8NB25 1140 aa6.69□□□□□ -1.34
SCARB2-218ENST00000639715 SETD1AO15047 1707 aaKnown RBP6.69□□□□□ -1.34
SCARB2-218ENST00000639715 CLSTN1O94985 981 aa6.69□□□□□ -1.34
SCARB2-218ENST00000639715 PRR29P0C7W0 189 aa6.69□□□□□ -1.34
SCARB2-218ENST00000639715 PSMA5P28066 241 aa6.69□□□□□ -1.34
SCARB2-218ENST00000639715 LMAN1P49257 510 aa6.69□□□□□ -1.34
SCARB2-218ENST00000639715 SART3Q15020 963 aaKnown RBP6.69□□□□□ -1.34
SCARB2-218ENST00000639715 POLKQ9UBT6 870 aa6.69□□□□□ -1.34
SCARB2-218ENST00000639715 ZFYVE16Q7Z3T8 1539 aa6.69□□□□□ -1.34
SCARB2-218ENST00000639715 ERVK-7P63135 1459 aa6.69□□□□□ -1.34
SCARB2-218ENST00000639715 SLFN14P0C7P3 912 aa6.69□□□□□ -1.34
SCARB2-218ENST00000639715 TBC1D9Q6ZT07 1266 aa6.69□□□□□ -1.34
SCARB2-218ENST00000639715 TICAM2Q86XR7 235 aa6.69□□□□□ -1.34
SCARB2-218ENST00000639715 MRPL50Q8N5N7 158 aaKnown RBP6.69□□□□□ -1.34
SCARB2-218ENST00000639715 WDR33Q9C0J8 1336 aaKnown RBP6.68□□□□□ -1.34
SCARB2-218ENST00000639715 GNAT3A8MTJ3 354 aa6.68□□□□□ -1.34
SCARB2-218ENST00000639715 TMCO3Q6UWJ1 677 aa6.68□□□□□ -1.34
SCARB2-218ENST00000639715 H3BQV1 296 aa6.68□□□□□ -1.34
SCARB2-218ENST00000639715 VAMP4O75379 141 aa6.68□□□□□ -1.34
SCARB2-218ENST00000639715 PDCP20941 246 aa6.68□□□□□ -1.34
SCARB2-218ENST00000639715 IFFO2Q5TF58 517 aa6.68□□□□□ -1.34
SCARB2-218ENST00000639715 TTC5Q8N0Z6 440 aa6.68□□□□□ -1.34
SCARB2-218ENST00000639715 CCAR2Q8N163 923 aaKnown RBP6.68□□□□□ -1.34
SCARB2-218ENST00000639715 NEK11Q8NG66 645 aa6.68□□□□□ -1.34
SCARB2-218ENST00000639715 CHMP3Q9Y3E7 222 aa6.68□□□□□ -1.34
SCARB2-218ENST00000639715 YTHDC2Q9H6S0 1430 aaKnown RBP6.68□□□□□ -1.34
SCARB2-218ENST00000639715 RAB11FIP3O75154 756 aa6.68□□□□□ -1.34
SCARB2-218ENST00000639715 BIRC2Q13490 618 aa6.68□□□□□ -1.34
SCARB2-218ENST00000639715 FAM212AQ96EL1 285 aa6.68□□□□□ -1.34
SCARB2-218ENST00000639715 MRVI1Q9Y6F6 885 aa6.68□□□□□ -1.34
SCARB2-218ENST00000639715 LAMC1P11047 1609 aa6.67□□□□□ -1.34
SCARB2-218ENST00000639715 CAPN2P17655 700 aa6.67□□□□□ -1.34
SCARB2-218ENST00000639715 IBSPP21815 317 aaPredicted RBP6.67□□□□□ -1.34
SCARB2-218ENST00000639715 FAM43BQ6ZT52 329 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms