RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 STK38Q15208 465 aa10.18□□□□□ -0.78
HNRNPU-219ENST00000639628 TTC39AQ5SRH9 613 aa10.18□□□□□ -0.78
HNRNPU-219ENST00000639628 LRSAM1Q6UWE0 723 aa10.18□□□□□ -0.78
HNRNPU-219ENST00000639628 FBXW7Q969H0 707 aa10.18□□□□□ -0.78
HNRNPU-219ENST00000639628 MAP3K2Q9Y2U5 619 aa10.18□□□□□ -0.78
HNRNPU-219ENST00000639628 MAP3K19Q56UN5 1328 aa10.18□□□□□ -0.78
HNRNPU-219ENST00000639628 CEBPZQ03701 1054 aaKnown RBP10.17□□□□□ -0.78
HNRNPU-219ENST00000639628 HOMER1Q86YM7 354 aa10.17□□□□□ -0.78
HNRNPU-219ENST00000639628 EYA1Q99502 592 aa10.17□□□□□ -0.78
HNRNPU-219ENST00000639628 ZC3H6P61129 1189 aaKnown RBP10.17□□□□□ -0.78
HNRNPU-219ENST00000639628 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.17□□□□□ -0.781e-12■□□□□ 9.9
HNRNPU-219ENST00000639628 CTNNA3Q9UI47 895 aa10.17□□□□□ -0.78
HNRNPU-219ENST00000639628 FOXO3O43524 673 aa10.17□□□□□ -0.78
HNRNPU-219ENST00000639628 BRPF1P55201 1214 aaPredicted RBP10.17□□□□□ -0.78
HNRNPU-219ENST00000639628 CEP126Q9P2H0 1117 aa10.17□□□□□ -0.78
HNRNPU-219ENST00000639628 ERCC6L2Q5T890 1561 aa10.17□□□□□ -0.78
HNRNPU-219ENST00000639628 UQCRHLA0A096LP55 91 aa10.17□□□□□ -0.78
HNRNPU-219ENST00000639628 UQCRHP07919 91 aa10.17□□□□□ -0.78
HNRNPU-219ENST00000639628 FERMT3Q86UX7 667 aa10.17□□□□□ -0.78
HNRNPU-219ENST00000639628 SYTL4Q96C24 671 aaPredicted RBP10.17□□□□□ -0.78
HNRNPU-219ENST00000639628 CCDC8Q9H0W5 538 aaPredicted RBP10.17□□□□□ -0.78
HNRNPU-219ENST00000639628 KIAA0232Q92628 1395 aa10.16□□□□□ -0.78
HNRNPU-219ENST00000639628 ME1P48163 572 aa10.16□□□□□ -0.78
HNRNPU-219ENST00000639628 CCDC57Q2TAC2 916 aa10.16□□□□□ -0.78
HNRNPU-219ENST00000639628 SIRT1Q96EB6 747 aa10.16□□□□□ -0.78
HNRNPU-219ENST00000639628 MAP3K5Q99683 1374 aa10.16□□□□□ -0.78
HNRNPU-219ENST00000639628 ALDH1L1O75891 902 aa10.16□□□□□ -0.78
HNRNPU-219ENST00000639628 OLFM4Q6UX06 510 aa10.16□□□□□ -0.78
HNRNPU-219ENST00000639628 CREBRFQ8IUR6 639 aa10.16□□□□□ -0.78
HNRNPU-219ENST00000639628 JMYQ8N9B5 988 aa10.16□□□□□ -0.78
HNRNPU-219ENST00000639628 INTS4Q96HW7 963 aaKnown RBP10.16□□□□□ -0.78
HNRNPU-219ENST00000639628 MYD88Q99836 296 aa10.16□□□□□ -0.78
HNRNPU-219ENST00000639628 BABAM1Q9NWV8 329 aa10.16□□□□□ -0.78
HNRNPU-219ENST00000639628 RBM27Q9P2N5 1060 aaKnown RBP10.16□□□□□ -0.78
HNRNPU-219ENST00000639628 UBE2HP62256 183 aa10.16□□□□□ -0.78
HNRNPU-219ENST00000639628 DHX8Q14562 1220 aaKnown RBP10.16□□□□□ -0.78
HNRNPU-219ENST00000639628 MPNDQ8N594 471 aa10.16□□□□□ -0.78
HNRNPU-219ENST00000639628 GDPD2Q9HCC8 539 aa10.16□□□□□ -0.78
HNRNPU-219ENST00000639628 CHPF2Q9P2E5 772 aa10.16□□□□□ -0.78
HNRNPU-219ENST00000639628 SART3Q15020 963 aaKnown RBP10.15□□□□□ -0.78
HNRNPU-219ENST00000639628 UVSSAQ2YD98 709 aa10.15□□□□□ -0.78
HNRNPU-219ENST00000639628 SBNO1A3KN83 1393 aa10.15□□□□□ -0.78
HNRNPU-219ENST00000639628 RBM10P98175 930 aaKnown RBP10.15□□□□□ -0.78
HNRNPU-219ENST00000639628 TOM1L2Q6ZVM7 507 aa10.15□□□□□ -0.78
HNRNPU-219ENST00000639628 HMGB1P09429 215 aaKnown RBP10.15□□□□□ -0.78
HNRNPU-219ENST00000639628 CHMLP26374 656 aa10.15□□□□□ -0.78
HNRNPU-219ENST00000639628 GJB2P29033 226 aa10.15□□□□□ -0.78
HNRNPU-219ENST00000639628 ZSCAN25Q6NSZ9 544 aa10.15□□□□□ -0.78
HNRNPU-219ENST00000639628 ZSCAN22P10073 491 aaPredicted RBP10.15□□□□□ -0.79
HNRNPU-219ENST00000639628 TSR1Q2NL82 804 aaKnown RBP10.15□□□□□ -0.79
HNRNPU-219ENST00000639628 ANKRD20A12PQ8NF67 263 aa10.15□□□□□ -0.79
HNRNPU-219ENST00000639628 U3KPZ7 1027 aaPredicted RBP10.15□□□□□ -0.79
HNRNPU-219ENST00000639628 TTC41PQ6P2S7 1318 aa10.15□□□□□ -0.79
HNRNPU-219ENST00000639628 HECW2Q9P2P5 1572 aa10.15□□□□□ -0.79
HNRNPU-219ENST00000639628 AATKQ6ZMQ8 1374 aa10.15□□□□□ -0.79
HNRNPU-219ENST00000639628 ATP7BP35670 1465 aa10.14□□□□□ -0.79
HNRNPU-219ENST00000639628 AKAP4Q5JQC9 854 aa10.14□□□□□ -0.79
HNRNPU-219ENST00000639628 VPS37DQ86XT2 251 aa10.14□□□□□ -0.79
HNRNPU-219ENST00000639628 HMG20BQ9P0W2 317 aa10.14□□□□□ -0.79
HNRNPU-219ENST00000639628 XBP1P17861 261 aa10.14□□□□□ -0.79
HNRNPU-219ENST00000639628 ZGPATQ8N5A5 531 aaKnown RBP10.14□□□□□ -0.79
HNRNPU-219ENST00000639628 OTUD7AQ8TE49 926 aaPredicted RBP10.14□□□□□ -0.79
HNRNPU-219ENST00000639628 PHF23Q9BUL5 403 aaPredicted RBP10.14□□□□□ -0.79
HNRNPU-219ENST00000639628 CNNM1Q9NRU3 951 aa10.14□□□□□ -0.79
HNRNPU-219ENST00000639628 E9PCH4 1651 aa10.14□□□□□ -0.79
HNRNPU-219ENST00000639628 RNF17Q9BXT8 1623 aaKnown RBP10.14□□□□□ -0.79
HNRNPU-219ENST00000639628 FKBP4Q02790 459 aaKnown RBP eCLIP10.14□□□□□ -0.79
HNRNPU-219ENST00000639628 G2E3Q7L622 706 aa10.14□□□□□ -0.79
HNRNPU-219ENST00000639628 CEP57L1Q8IYX8 460 aa10.14□□□□□ -0.79
HNRNPU-219ENST00000639628 TBX22Q9Y458 520 aa10.14□□□□□ -0.79
HNRNPU-219ENST00000639628 FAM135BQ49AJ0 1406 aa10.14□□□□□ -0.79
HNRNPU-219ENST00000639628 ANXA1P04083 346 aa10.14□□□□□ -0.79
HNRNPU-219ENST00000639628 DDX54Q8TDD1 881 aaKnown RBP10.14□□□□□ -0.79
HNRNPU-219ENST00000639628 USP25Q9UHP3 1055 aa10.14□□□□□ -0.79
HNRNPU-219ENST00000639628 PLEKHG3A1L390 1219 aa10.13□□□□□ -0.79
HNRNPU-219ENST00000639628 SMC2O95347 1197 aa10.13□□□□□ -0.79
HNRNPU-219ENST00000639628 KSR2Q6VAB6 950 aa10.13□□□□□ -0.79
HNRNPU-219ENST00000639628 DDX11Q96FC9 970 aa10.13□□□□□ -0.79
HNRNPU-219ENST00000639628 PRDM11Q9NQV5 511 aa10.13□□□□□ -0.79
HNRNPU-219ENST00000639628 ABCC3O15438 1527 aa10.13□□□□□ -0.79
HNRNPU-219ENST00000639628 YEATS2Q9ULM3 1422 aa10.13□□□□□ -0.79
HNRNPU-219ENST00000639628 HS1BP3Q53T59 392 aa10.13□□□□□ -0.79
HNRNPU-219ENST00000639628 HOXC9P31274 260 aa10.13□□□□□ -0.79
HNRNPU-219ENST00000639628 ANKRD24Q8TF21 1146 aa10.13□□□□□ -0.79
HNRNPU-219ENST00000639628 FMNL2Q96PY5 1086 aa10.13□□□□□ -0.79
HNRNPU-219ENST00000639628 LARP6Q9BRS8 491 aaKnown RBP10.13□□□□□ -0.79
HNRNPU-219ENST00000639628 DDX19AQ9NUU7 478 aaKnown RBP10.13□□□□□ -0.79
HNRNPU-219ENST00000639628 AOX1Q06278 1338 aa10.12□□□□□ -0.79
HNRNPU-219ENST00000639628 PES1O00541 588 aaKnown RBP10.12□□□□□ -0.79
HNRNPU-219ENST00000639628 CCP110O43303 1012 aa10.12□□□□□ -0.79
HNRNPU-219ENST00000639628 CDKL5O76039 1030 aa10.12□□□□□ -0.79
HNRNPU-219ENST00000639628 AMOTL1Q8IY63 956 aa10.12□□□□□ -0.79
HNRNPU-219ENST00000639628 IMMTQ16891 758 aaKnown RBP10.12□□□□□ -0.79
HNRNPU-219ENST00000639628 ARGLU1Q9NWB6 273 aaPredicted RBP10.12□□□□□ -0.79
HNRNPU-219ENST00000639628 ARHGEF10O15013 1369 aa10.12□□□□□ -0.79
HNRNPU-219ENST00000639628 A0A087WZG4 1122 aa10.12□□□□□ -0.79
HNRNPU-219ENST00000639628 CAMK4Q16566 473 aa10.12□□□□□ -0.79
HNRNPU-219ENST00000639628 MNS1Q8NEH6 495 aa10.12□□□□□ -0.79
HNRNPU-219ENST00000639628 BRMS1Q9HCU9 246 aa10.12□□□□□ -0.79
HNRNPU-219ENST00000639628 AKAP2Q9Y2D5 859 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms