RNA–Protein interactions for RNA: ENST00000639409.1

PAX6-257, Transcript of paired box 6, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PAX6, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-257ENST00000639409 CADPS2Q86UW7 1296 aa13.62□□□□□ -0.23
PAX6-257ENST00000639409 ZNF592Q92610 1267 aa13.62□□□□□ -0.23
PAX6-257ENST00000639409 SLKQ9H2G2 1235 aaPredicted RBP13.62□□□□□ -0.23
PAX6-257ENST00000639409 NPHP3Q7Z494 1330 aa13.62□□□□□ -0.23
PAX6-257ENST00000639409 PNMA6EA0A0J9YXQ4 647 aa13.62□□□□□ -0.23
PAX6-257ENST00000639409 BECN1Q14457 450 aa13.62□□□□□ -0.23
PAX6-257ENST00000639409 OVOS2A0A0G2JMS6 1433 aa13.61□□□□□ -0.23
PAX6-257ENST00000639409 BBXQ8WY36 941 aaPredicted RBP13.61□□□□□ -0.23
PAX6-257ENST00000639409 EXOC6BQ9Y2D4 811 aa13.61□□□□□ -0.23
PAX6-257ENST00000639409 TTC22Q5TAA0 569 aa13.61□□□□□ -0.23
PAX6-257ENST00000639409 USP44Q9H0E7 712 aa13.61□□□□□ -0.23
PAX6-257ENST00000639409 NLRP2Q9NX02 1062 aa13.61□□□□□ -0.23
PAX6-257ENST00000639409 SCN11AQ9UI33 1791 aa13.6□□□□□ -0.23
PAX6-257ENST00000639409 KDM6AO15550 1401 aaPredicted RBP13.6□□□□□ -0.23
PAX6-257ENST00000639409 LRRFIP2Q9Y608 721 aaKnown RBP13.6□□□□□ -0.23
PAX6-257ENST00000639409 RBM25P49756 843 aaKnown RBP13.59□□□□□ -0.23
PAX6-257ENST00000639409 HMMRO75330 724 aa13.59□□□□□ -0.23
PAX6-257ENST00000639409 HOXB7P09629 217 aa13.59□□□□□ -0.23
PAX6-257ENST00000639409 SPATA31A3Q5VYP0 1347 aa13.59□□□□□ -0.23
PAX6-257ENST00000639409 C5P01031 1676 aa13.59□□□□□ -0.23
PAX6-257ENST00000639409 ADCY9O60503 1353 aa13.59□□□□□ -0.23
PAX6-257ENST00000639409 GNAI3P08754 354 aa13.58□□□□□ -0.23
PAX6-257ENST00000639409 PROSER3Q2NL68 480 aa13.58□□□□□ -0.23
PAX6-257ENST00000639409 SPRYD3Q8NCJ5 442 aa13.58□□□□□ -0.23
PAX6-257ENST00000639409 RNF216Q9NWF9 866 aaPredicted RBP13.58□□□□□ -0.23
PAX6-257ENST00000639409 HEG1Q9ULI3 1381 aa13.58□□□□□ -0.24
PAX6-257ENST00000639409 PI4KAP2A4QPH2 592 aa13.58□□□□□ -0.24
PAX6-257ENST00000639409 CDC45O75419 566 aa13.58□□□□□ -0.24
PAX6-257ENST00000639409 GIGYF1O75420 1035 aaPredicted RBP13.58□□□□□ -0.24
PAX6-257ENST00000639409 BRINP3Q76B58 766 aa13.58□□□□□ -0.24
PAX6-257ENST00000639409 PI4KAP1Q8N8J0 262 aa13.58□□□□□ -0.24
PAX6-257ENST00000639409 ANTXR1Q9H6X2 564 aa13.58□□□□□ -0.24
PAX6-257ENST00000639409 USP35Q9P2H5 1018 aa13.58□□□□□ -0.24
PAX6-257ENST00000639409 TUBGCP6Q96RT7 1819 aa13.58□□□□□ -0.24
PAX6-257ENST00000639409 RAPGEF4Q8WZA2 1011 aa13.57□□□□□ -0.24
PAX6-257ENST00000639409 KIF2CQ99661 725 aa13.57□□□□□ -0.24
PAX6-257ENST00000639409 KDM4FA0A1W2PPD8 638 aa13.57□□□□□ -0.24
PAX6-257ENST00000639409 FRAT2O75474 233 aaPredicted RBP13.57□□□□□ -0.24
PAX6-257ENST00000639409 NBPF7P0C2Y1 421 aaPredicted RBP13.57□□□□□ -0.24
PAX6-257ENST00000639409 TSHZ3Q63HK5 1081 aa13.57□□□□□ -0.24
PAX6-257ENST00000639409 ZNF335Q9H4Z2 1342 aaPredicted RBP13.57□□□□□ -0.24
PAX6-257ENST00000639409 CSB-PGBD3P0DP91 1061 aa13.56□□□□□ -0.24
PAX6-257ENST00000639409 ATP8B2P98198 1209 aa13.56□□□□□ -0.24
PAX6-257ENST00000639409 SLC39A6Q13433 755 aa13.56□□□□□ -0.24
PAX6-257ENST00000639409 IL27Q8NEV9 243 aa13.56□□□□□ -0.24
PAX6-257ENST00000639409 UBTFL1P0CB47 393 aaPredicted RBP13.56□□□□□ -0.24
PAX6-257ENST00000639409 SDSP20132 328 aa13.56□□□□□ -0.24
PAX6-257ENST00000639409 BEND3Q5T5X7 828 aa13.56□□□□□ -0.24
PAX6-257ENST00000639409 SRCIN1Q9C0H9 1055 aa13.56□□□□□ -0.24
PAX6-257ENST00000639409 PKD1L3Q7Z443 1732 aa13.56□□□□□ -0.24
PAX6-257ENST00000639409 PHKG2P15735 406 aa13.55□□□□□ -0.24
PAX6-257ENST00000639409 DNAAF4Q8WXU2 420 aa13.55□□□□□ -0.24
PAX6-257ENST00000639409 PRDM10Q9NQV6 1147 aa13.55□□□□□ -0.24
PAX6-257ENST00000639409 IBTKQ9P2D0 1353 aaPredicted RBP13.55□□□□□ -0.24
PAX6-257ENST00000639409 DBF4Q9UBU7 674 aaPredicted RBP13.55□□□□□ -0.24
PAX6-257ENST00000639409 SALL3Q9BXA9 1300 aa13.55□□□□□ -0.24
PAX6-257ENST00000639409 TATP17735 454 aaPredicted RBP13.54□□□□□ -0.24
PAX6-257ENST00000639409 ABCC6O95255 1503 aa13.54□□□□□ -0.24
PAX6-257ENST00000639409 CD2BP2O95400 341 aaKnown RBP13.54□□□□□ -0.24
PAX6-257ENST00000639409 CYP27B1O15528 508 aa13.53□□□□□ -0.24
PAX6-257ENST00000639409 PDE1AP54750 535 aa13.53□□□□□ -0.24
PAX6-257ENST00000639409 NFATC2IPQ8NCF5 419 aa13.53□□□□□ -0.24
PAX6-257ENST00000639409 RBM42Q9BTD8 480 aaKnown RBP13.53□□□□□ -0.24
PAX6-257ENST00000639409 LRRCC1Q9C099 1032 aa13.53□□□□□ -0.24
PAX6-257ENST00000639409 SLC52A2Q9HAB3 445 aa13.53□□□□□ -0.24
PAX6-257ENST00000639409 CPDO75976 1380 aa13.53□□□□□ -0.24
PAX6-257ENST00000639409 ABCA3Q99758 1704 aa13.53□□□□□ -0.24
PAX6-257ENST00000639409 GTF2E1P29083 439 aaPredicted RBP13.53□□□□□ -0.24
PAX6-257ENST00000639409 ZNF790Q6PG37 636 aa13.53□□□□□ -0.24
PAX6-257ENST00000639409 PSMD1Q99460 953 aa13.53□□□□□ -0.24
PAX6-257ENST00000639409 PPP1R42Q7Z4L9 355 aa13.52□□□□□ -0.24
PAX6-257ENST00000639409 MAP3K2Q9Y2U5 619 aa13.52□□□□□ -0.24
PAX6-257ENST00000639409 SSH3Q8TE77 659 aa13.52□□□□□ -0.25
PAX6-257ENST00000639409 OSBPL3Q9H4L5 887 aa13.52□□□□□ -0.25
PAX6-257ENST00000639409 MRC1P22897 1456 aa13.51□□□□□ -0.25
PAX6-257ENST00000639409 PDIA6Q15084 440 aa13.51□□□□□ -0.25
PAX6-257ENST00000639409 CWF19L2Q2TBE0 894 aaKnown RBP13.51□□□□□ -0.25
PAX6-257ENST00000639409 SPG7Q9UQ90 795 aa13.51□□□□□ -0.25
PAX6-257ENST00000639409 TMED8Q6PL24 325 aaPredicted RBP13.51□□□□□ -0.25
PAX6-257ENST00000639409 HSCBQ8IWL3 235 aa13.51□□□□□ -0.25
PAX6-257ENST00000639409 IFNL2Q8IZJ0 200 aa13.51□□□□□ -0.25
PAX6-257ENST00000639409 IL1RAPL2Q9NP60 686 aa13.51□□□□□ -0.25
PAX6-257ENST00000639409 GLI3P10071 1580 aa13.5□□□□□ -0.25
PAX6-257ENST00000639409 SLAIN2Q9P270 581 aa13.5□□□□□ -0.25
PAX6-257ENST00000639409 SOS2Q07890 1332 aaPredicted RBP13.5□□□□□ -0.25
PAX6-257ENST00000639409 SRGAP3O43295 1099 aa13.5□□□□□ -0.25
PAX6-257ENST00000639409 MX1P20591 662 aa13.5□□□□□ -0.25
PAX6-257ENST00000639409 AIMP1Q12904 312 aaKnown RBP13.5□□□□□ -0.25
PAX6-257ENST00000639409 POLA2Q14181 598 aa13.5□□□□□ -0.25
PAX6-257ENST00000639409 ZNF496Q96IT1 587 aaPredicted RBP13.5□□□□□ -0.25
PAX6-257ENST00000639409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.5□□□□□ -0.25
PAX6-257ENST00000639409 KSR2Q6VAB6 950 aa13.49□□□□□ -0.25
PAX6-257ENST00000639409 PIP4K2AP48426 406 aaPredicted RBP13.49□□□□□ -0.25
PAX6-257ENST00000639409 GRIPAP1Q4V328 841 aa13.49□□□□□ -0.25
PAX6-257ENST00000639409 SNX21Q969T3 373 aa13.49□□□□□ -0.25
PAX6-257ENST00000639409 PLCD4Q9BRC7 762 aa13.49□□□□□ -0.25
PAX6-257ENST00000639409 PRDM11Q9NQV5 511 aa13.49□□□□□ -0.25
PAX6-257ENST00000639409 PARP4Q9UKK3 1724 aaKnown RBP13.49□□□□□ -0.25
PAX6-257ENST00000639409 COL5A2P05997 1499 aaPredicted RBP13.48□□□□□ -0.25
PAX6-257ENST00000639409 SURF6O75683 361 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms