RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 TRPM2O94759 1503 aa16.19■□□□□ 0.18
SCARB2-215ENST00000639145 SLC5A1P13866 664 aa16.19■□□□□ 0.18
SCARB2-215ENST00000639145 USP5P45974 858 aa16.19■□□□□ 0.18
SCARB2-215ENST00000639145 CDC5LQ99459 802 aaKnown RBP16.19■□□□□ 0.18
SCARB2-215ENST00000639145 SASS6Q6UVJ0 657 aa16.18■□□□□ 0.18
SCARB2-215ENST00000639145 SMARCC1Q92922 1105 aaPredicted RBP16.18■□□□□ 0.18
SCARB2-215ENST00000639145 PARD3Q8TEW0 1356 aa16.18■□□□□ 0.18
SCARB2-215ENST00000639145 TPM2P07951 284 aa16.17■□□□□ 0.18
SCARB2-215ENST00000639145 MAP3K12Q12852 859 aa16.17■□□□□ 0.18
SCARB2-215ENST00000639145 NIP7Q9Y221 180 aaKnown RBP eCLIP16.17■□□□□ 0.18
SCARB2-215ENST00000639145 PRPF40BQ6NWY9 871 aaKnown RBP16.17■□□□□ 0.18
SCARB2-215ENST00000639145 DCAF5Q96JK2 942 aa16.17■□□□□ 0.18
SCARB2-215ENST00000639145 SETDB2Q96T68 719 aa16.17■□□□□ 0.18
SCARB2-215ENST00000639145 IQSEC3Q9UPP2 1182 aaPredicted RBP16.17■□□□□ 0.18
SCARB2-215ENST00000639145 POLR3DP05423 398 aaPredicted RBP16.17■□□□□ 0.18
SCARB2-215ENST00000639145 LMBR1LQ6UX01 489 aa16.17■□□□□ 0.18
SCARB2-215ENST00000639145 NAPBQ9H115 298 aa16.17■□□□□ 0.18
SCARB2-215ENST00000639145 PDRG1Q9NUG6 133 aa16.17■□□□□ 0.18
SCARB2-215ENST00000639145 POLR3AO14802 1390 aaPredicted RBP16.17■□□□□ 0.18
SCARB2-215ENST00000639145 TPM1P09493 284 aa16.16■□□□□ 0.18
SCARB2-215ENST00000639145 GSE1Q14687 1217 aa16.16■□□□□ 0.18
SCARB2-215ENST00000639145 STK38Q15208 465 aa16.16■□□□□ 0.18
SCARB2-215ENST00000639145 IMMTQ16891 758 aaKnown RBP16.16■□□□□ 0.18
SCARB2-215ENST00000639145 ANKRD20A12PQ8NF67 263 aa16.16■□□□□ 0.18
SCARB2-215ENST00000639145 GOLIM4O00461 696 aa16.16■□□□□ 0.18
SCARB2-215ENST00000639145 IGHDP01880 384 aa16.16■□□□□ 0.18
SCARB2-215ENST00000639145 ANKRD1Q15327 319 aa16.16■□□□□ 0.18
SCARB2-215ENST00000639145 ZFYVE16Q7Z3T8 1539 aa16.16■□□□□ 0.18
SCARB2-215ENST00000639145 LARP1BQ659C4 914 aaKnown RBP16.15■□□□□ 0.18
SCARB2-215ENST00000639145 ECHDC1Q9NTX5 307 aa16.15■□□□□ 0.18
SCARB2-215ENST00000639145 MPHOSPH10O00566 681 aaKnown RBP16.15■□□□□ 0.18
SCARB2-215ENST00000639145 CASTP20810 708 aaKnown RBP16.15■□□□□ 0.18
SCARB2-215ENST00000639145 NFKBIBQ15653 356 aa16.15■□□□□ 0.18
SCARB2-215ENST00000639145 RNF214Q8ND24 703 aa16.15■□□□□ 0.18
SCARB2-215ENST00000639145 NOC3LQ8WTT2 800 aaKnown RBP16.15■□□□□ 0.18
SCARB2-215ENST00000639145 ARID3AQ99856 593 aa16.15■□□□□ 0.18
SCARB2-215ENST00000639145 TFCP2L1Q9NZI6 479 aa16.15■□□□□ 0.18
SCARB2-215ENST00000639145 CRACR2BQ8N4Y2 399 aaPredicted RBP16.15■□□□□ 0.18
SCARB2-215ENST00000639145 DDX11Q96FC9 970 aa16.15■□□□□ 0.18
SCARB2-215ENST00000639145 PRPF40AO75400 957 aaKnown RBP16.15■□□□□ 0.18
SCARB2-215ENST00000639145 RLBP1P12271 317 aa16.15■□□□□ 0.18
SCARB2-215ENST00000639145 MKNK2Q9HBH9 465 aa16.15■□□□□ 0.18
SCARB2-215ENST00000639145 KSR2Q6VAB6 950 aa16.14■□□□□ 0.17
SCARB2-215ENST00000639145 DZIP3Q86Y13 1208 aaKnown RBP16.14■□□□□ 0.17
SCARB2-215ENST00000639145 FAM98CQ17RN3 349 aaKnown RBP16.14■□□□□ 0.17
SCARB2-215ENST00000639145 CWF19L2Q2TBE0 894 aaKnown RBP16.14■□□□□ 0.17
SCARB2-215ENST00000639145 CCDC82Q8N4S0 544 aa16.14■□□□□ 0.17
SCARB2-215ENST00000639145 GRM8O00222 908 aa16.13■□□□□ 0.17
SCARB2-215ENST00000639145 KRT32Q14532 448 aa16.13■□□□□ 0.17
SCARB2-215ENST00000639145 U3KPZ7 1027 aaPredicted RBP16.13■□□□□ 0.17
SCARB2-215ENST00000639145 RNMTO43148 476 aaKnown RBP16.13■□□□□ 0.17
SCARB2-215ENST00000639145 NLRP3Q96P20 1036 aa16.13■□□□□ 0.17
SCARB2-215ENST00000639145 SOGA3Q5TF21 947 aa16.13■□□□□ 0.17
SCARB2-215ENST00000639145 RSPH6AQ9H0K4 717 aa16.13■□□□□ 0.17
SCARB2-215ENST00000639145 MAST1Q9Y2H9 1570 aa16.13■□□□□ 0.17
SCARB2-215ENST00000639145 K7ELQ4 463 aaPredicted RBP16.13■□□□□ 0.17
SCARB2-215ENST00000639145 VAMP4O75379 141 aa16.13■□□□□ 0.17
SCARB2-215ENST00000639145 RANBP6O60518 1105 aaKnown RBP16.12■□□□□ 0.17
SCARB2-215ENST00000639145 KINO60870 393 aaKnown RBP16.12■□□□□ 0.17
SCARB2-215ENST00000639145 PLA2R1Q13018 1463 aa16.12■□□□□ 0.17
SCARB2-215ENST00000639145 RTCBQ9Y3I0 505 aaKnown RBP16.12■□□□□ 0.17
SCARB2-215ENST00000639145 MAP3K5Q99683 1374 aa16.12■□□□□ 0.17
SCARB2-215ENST00000639145 CAVIN1Q6NZI2 390 aaKnown RBP16.11■□□□□ 0.17
SCARB2-215ENST00000639145 LGR6Q9HBX8 967 aa16.11■□□□□ 0.17
SCARB2-215ENST00000639145 CCDC152Q4G0S7 254 aa16.11■□□□□ 0.17
SCARB2-215ENST00000639145 PHAXQ9H814 394 aaKnown RBP16.11■□□□□ 0.17
SCARB2-215ENST00000639145 SLC4A8Q2Y0W8 1093 aa16.11■□□□□ 0.17
SCARB2-215ENST00000639145 RHPN1Q8TCX5 695 aa16.11■□□□□ 0.17
SCARB2-215ENST00000639145 CDK5RAP3Q96JB5 506 aa16.11■□□□□ 0.17
SCARB2-215ENST00000639145 PCDHB15Q9Y5E8 787 aa16.11■□□□□ 0.17
SCARB2-215ENST00000639145 METP08581 1390 aa16.11■□□□□ 0.17
SCARB2-215ENST00000639145 FERMT3Q86UX7 667 aa16.1■□□□□ 0.17
SCARB2-215ENST00000639145 MRPL50Q8N5N7 158 aaKnown RBP16.1■□□□□ 0.17
SCARB2-215ENST00000639145 LINS1Q8NG48 757 aa16.1■□□□□ 0.17
SCARB2-215ENST00000639145 PA2G4Q9UQ80 394 aaKnown RBP16.1■□□□□ 0.17
SCARB2-215ENST00000639145 IPO7O95373 1038 aaKnown RBP16.1■□□□□ 0.17
SCARB2-215ENST00000639145 ME1P48163 572 aa16.1■□□□□ 0.17
SCARB2-215ENST00000639145 ARHGAP45Q92619 1136 aa16.1■□□□□ 0.17
SCARB2-215ENST00000639145 PLEKHG3A1L390 1219 aa16.1■□□□□ 0.17
SCARB2-215ENST00000639145 IL13P35225 146 aa16.1■□□□□ 0.17
SCARB2-215ENST00000639145 ST5P78524 1137 aa16.1■□□□□ 0.17
SCARB2-215ENST00000639145 ANKRD18AQ8IVF6 992 aa16.1■□□□□ 0.17
SCARB2-215ENST00000639145 PCDH11XQ9BZA7 1347 aa16.1■□□□□ 0.17
SCARB2-215ENST00000639145 PCDH11YQ9BZA8 1340 aa16.1■□□□□ 0.17
SCARB2-215ENST00000639145 PRIM1P49642 420 aaKnown RBP16.09■□□□□ 0.17
SCARB2-215ENST00000639145 CCAR2Q8N163 923 aaKnown RBP16.09■□□□□ 0.17
SCARB2-215ENST00000639145 HELBQ8NG08 1087 aaPredicted RBP16.09■□□□□ 0.17
SCARB2-215ENST00000639145 LARP6Q9BRS8 491 aaKnown RBP16.09■□□□□ 0.17
SCARB2-215ENST00000639145 ZCCHC11Q5TAX3 1644 aaKnown RBP16.09■□□□□ 0.17
SCARB2-215ENST00000639145 EIF2AK4Q9P2K8 1649 aaKnown RBP16.09■□□□□ 0.17
SCARB2-215ENST00000639145 GNPATO15228 680 aa16.09■□□□□ 0.17
SCARB2-215ENST00000639145 HAND2P61296 217 aa16.09■□□□□ 0.17
SCARB2-215ENST00000639145 ZNF396Q96N95 335 aaPredicted RBP16.09■□□□□ 0.17
SCARB2-215ENST00000639145 TMEM94Q12767 1356 aa16.08■□□□□ 0.17
SCARB2-215ENST00000639145 TXLNAP40222 546 aa16.08■□□□□ 0.16
SCARB2-215ENST00000639145 EDC4Q6P2E9 1401 aaKnown RBP16.08■□□□□ 0.16
SCARB2-215ENST00000639145 ATP2B3Q16720 1220 aa16.08■□□□□ 0.16
SCARB2-215ENST00000639145 ZNF790Q6PG37 636 aa16.08■□□□□ 0.16
SCARB2-215ENST00000639145 ZNF213O14771 459 aa16.08■□□□□ 0.16
SCARB2-215ENST00000639145 ALDH1L1O75891 902 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms