RNA–Protein interactions for RNA: ENST00000639092.1

ARHGEF9-238, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5

Gene ARHGEF9, Length 4,657 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-238	ENST00000639092	FAM13B	Q9NYF5	915 aa		10.1	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	CFAP45	Q9UL16	551 aa		10.1	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	ME1	P48163	572 aa		10.1	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.1	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	PLEKHH1	Q9ULM0	1364 aa		10.1	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	MAP4K4	O95819	1239 aa	Predicted RBP	10.09	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	TSPY26P	Q9H489	355 aa		10.09	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	TRMT112	Q9UI30	125 aa	Known RBP	10.09	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	PLEKHG3	A1L390	1219 aa		10.09	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	STK3	Q13188	491 aa		10.09	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	RNF214	Q8ND24	703 aa		10.09	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	KDM4A	O75164	1064 aa		10.09	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	ARGLU1	Q9NWB6	273 aa	Predicted RBP	10.09	□□□□□ -0.79
ARHGEF9-238	ENST00000639092		A0A087WZG4	1122 aa		10.09	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	CCDC192	P0DO97	292 aa		10.09	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	CDR1	P51861	262 aa		10.09	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	MAP3K12	Q12852	859 aa		10.09	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	WWC2	Q6AWC2	1192 aa		10.09	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	CDC42BPA	Q5VT25	1732 aa		10.08	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	IQGAP3	Q86VI3	1631 aa		10.08	□□□□□ -0.8
ARHGEF9-238	ENST00000639092		A0A1W2PP64	1363 aa		10.08	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	PIK3R4	Q99570	1358 aa		10.08	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	PDILT	Q8N807	584 aa		10.08	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	ANKRD24	Q8TF21	1146 aa		10.08	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	ACBD3	Q9H3P7	528 aa		10.08	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	ANKRD18B	A2A2Z9	1011 aa		10.08	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	CCP110	O43303	1012 aa		10.08	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	SLC5A1	P13866	664 aa		10.08	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	NUTM1	Q86Y26	1132 aa		10.08	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	FAM43A	Q8N2R8	423 aa		10.08	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	EFCAB6	Q5THR3	1501 aa		10.08	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	PLEKHG1	Q9ULL1	1385 aa		10.08	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	CCDC196	A0A1B0GTZ2	297 aa		10.08	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	RDX	P35241	583 aa	Known RBP	10.08	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	BMP2K	Q9NSY1	1161 aa	Predicted RBP	10.08	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	POLK	Q9UBT6	870 aa		10.08	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	TOM1	O60784	492 aa		10.07	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	TMEM132A	Q24JP5	1023 aa		10.07	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	SNRPA1	P09661	255 aa	Known RBP	10.07	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	TNNT3	P45378	269 aa	Predicted RBP	10.07	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	CEBPZ	Q03701	1054 aa	Known RBP	10.07	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	NAPB	Q9H115	298 aa		10.07	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	YEATS2	Q9ULM3	1422 aa		10.07	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	SMC2	O95347	1197 aa		10.07	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	HMGB1	P09429	215 aa	Known RBP	10.07	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	AKAP4	Q5JQC9	854 aa		10.07	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	SLF2	Q8IX21	1173 aa		10.07	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	CDC5L	Q99459	802 aa	Known RBP	10.07	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	LUC7L	Q9NQ29	371 aa	Known RBP	10.07	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	LRRFIP2	Q9Y608	721 aa	Known RBP	10.07	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	ABCA9	Q8IUA7	1624 aa		10.06	□□□□□ -0.8
ARHGEF9-238	ENST00000639092		F6X3S4	739 aa		10.06	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	TNMD	Q9H2S6	317 aa		10.06	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	ZNHIT6	Q9NWK9	470 aa	Known RBP	10.06	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	TRIM27	P14373	513 aa		10.06	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	UNC13B	O14795	1591 aa		10.06	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	RUFY1	Q96T51	708 aa		10.06	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	BOLA2	Q9H3K6	86 aa		10.06	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	RNF41	Q9H4P4	317 aa	Predicted RBP	10.06	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	DZIP1	Q86YF9	867 aa	Known RBP	10.06	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	SH2B1	Q9NRF2	756 aa	Predicted RBP	10.06	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	SBNO1	A3KN83	1393 aa		10.06	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	USP5	P45974	858 aa		10.05	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	SYCP1	Q15431	976 aa		10.05	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	ZFYVE27	Q5T4F4	411 aa		10.05	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	STK11IP	Q8N1F8	1099 aa		10.05	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	SPATA32	Q96LK8	384 aa		10.05	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	ECHDC1	Q9NTX5	307 aa		10.05	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	CWC25	Q9NXE8	425 aa	Predicted RBP	10.05	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	CAST	P20810	708 aa	Known RBP	10.05	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	RPGR	Q92834	1020 aa	Known RBP	10.05	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	KDM5A	P29375	1690 aa	Known RBP	10.05	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	ERVK-7	P63135	1459 aa		10.05	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	HSP90AA2P	Q14568	343 aa	Predicted RBP	10.05	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	IP6K1	Q92551	441 aa		10.05	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	CDCA7	Q9BWT1	371 aa	Predicted RBP	10.05	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	CARD14	Q9BXL6	1004 aa		10.05	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	ZBTB3	Q9H5J0	574 aa		10.05	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	ANKIB1	Q9P2G1	1089 aa		10.05	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	CEP131	Q9UPN4	1083 aa		10.05	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	KIF1B	O60333	1816 aa		10.05	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	POLR3D	P05423	398 aa	Predicted RBP	10.04	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	PPP1R42	Q7Z4L9	355 aa		10.04	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	IQCA1	Q86XH1	822 aa		10.04	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	FAM135B	Q49AJ0	1406 aa		10.04	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	LDHC	P07864	332 aa		10.04	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	TXLNB	Q8N3L3	684 aa		10.04	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	MKNK2	Q9HBH9	465 aa		10.04	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	TEX35	Q5T0J7	233 aa		10.04	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	CEP57L1	Q8IYX8	460 aa		10.04	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	10.04	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	MYO6	Q9UM54	1294 aa		10.04	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	ABCC3	O15438	1527 aa		10.04	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	HOXB7	P09629	217 aa		10.04	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	EIF4A2	Q14240	407 aa	Known RBP	10.04	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	LDHAL6A	Q6ZMR3	332 aa		10.04	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	CTCFL	Q8NI51	663 aa	Predicted RBP	10.04	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	MBIP	Q9NS73	344 aa		10.04	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	ALDH1L1	O75891	902 aa		10.03	□□□□□ -0.8
ARHGEF9-238	ENST00000639092	SERPINC1	P01008	464 aa		10.03	□□□□□ -0.8

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