RNA–Protein interactions for RNA: ENST00000638546.1

HCG27-205, Transcript of HLA complex group 27, humanhuman

TSL 1 (best)

Gene HCG27, Length 1,641 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-205ENST00000638546 KSR2Q6VAB6 950 aa20.64■□□□□ 0.9
HCG27-205ENST00000638546 PARP4Q9UKK3 1724 aaKnown RBP20.64■□□□□ 0.89
HCG27-205ENST00000638546 ERVV-2B6SEH9 535 aa20.64■□□□□ 0.89
HCG27-205ENST00000638546 SNRPA1P09661 255 aaKnown RBP20.64■□□□□ 0.89
HCG27-205ENST00000638546 PROSER3Q2NL68 480 aa20.64■□□□□ 0.89
HCG27-205ENST00000638546 ZNF496Q96IT1 587 aaPredicted RBP20.64■□□□□ 0.89
HCG27-205ENST00000638546 FMNL2Q96PY5 1086 aa20.64■□□□□ 0.89
HCG27-205ENST00000638546 ADCY9O60503 1353 aa20.63■□□□□ 0.89
HCG27-205ENST00000638546 LRRFIP2Q9Y608 721 aaKnown RBP20.63■□□□□ 0.89
HCG27-205ENST00000638546 DDX58O95786 925 aaKnown RBP20.62■□□□□ 0.89
HCG27-205ENST00000638546 PDIA6Q15084 440 aa20.62■□□□□ 0.89
HCG27-205ENST00000638546 BTG4Q9NY30 223 aa20.62■□□□□ 0.89
HCG27-205ENST00000638546 ALDH1L1O75891 902 aa20.61■□□□□ 0.89
HCG27-205ENST00000638546 MAP3K2Q9Y2U5 619 aa20.61■□□□□ 0.89
HCG27-205ENST00000638546 N4BP2Q86UW6 1770 aaPredicted RBP20.61■□□□□ 0.89
HCG27-205ENST00000638546 PLEKHM2Q8IWE5 1019 aa20.6■□□□□ 0.89
HCG27-205ENST00000638546 PHLPP1O60346 1717 aa20.6■□□□□ 0.89
HCG27-205ENST00000638546 ANP32EQ9BTT0 268 aa20.6■□□□□ 0.89
HCG27-205ENST00000638546 DDX54Q8TDD1 881 aaKnown RBP20.59■□□□□ 0.89
HCG27-205ENST00000638546 C16orf71Q8IYS4 520 aaPredicted RBP20.58■□□□□ 0.89
HCG27-205ENST00000638546 PNMA6EA0A0J9YXQ4 647 aa20.57■□□□□ 0.88
HCG27-205ENST00000638546 TBC1D32Q96NH3 1257 aa20.57■□□□□ 0.88
HCG27-205ENST00000638546 HDAC5Q9UQL6 1122 aa20.57■□□□□ 0.88
HCG27-205ENST00000638546 APBB1O00213 710 aa20.56■□□□□ 0.88
HCG27-205ENST00000638546 SMARCA5O60264 1052 aaPredicted RBP20.56■□□□□ 0.88
HCG27-205ENST00000638546 USP16Q9Y5T5 823 aa20.56■□□□□ 0.88
HCG27-205ENST00000638546 COL16A1Q07092 1604 aaPredicted RBP20.56■□□□□ 0.88
HCG27-205ENST00000638546 COL22A1Q8NFW1 1626 aaPredicted RBP20.56■□□□□ 0.88
HCG27-205ENST00000638546 AIMP1Q12904 312 aaKnown RBP20.56■□□□□ 0.88
HCG27-205ENST00000638546 LINS1Q8NG48 757 aa20.56■□□□□ 0.88
HCG27-205ENST00000638546 SSH3Q8TE77 659 aa20.56■□□□□ 0.88
HCG27-205ENST00000638546 COL14A1Q05707 1796 aaKnown RBP20.55■□□□□ 0.88
HCG27-205ENST00000638546 NBPF7P0C2Y1 421 aaPredicted RBP20.55■□□□□ 0.88
HCG27-205ENST00000638546 MYL6BP14649 208 aa20.55■□□□□ 0.88
HCG27-205ENST00000638546 POLA2Q14181 598 aa20.54■□□□□ 0.88
HCG27-205ENST00000638546 TTC22Q5TAA0 569 aa20.54■□□□□ 0.88
HCG27-205ENST00000638546 RIC3Q7Z5B4 369 aa20.54■□□□□ 0.88
HCG27-205ENST00000638546 XAGE3Q8WTP9 111 aa20.54■□□□□ 0.88
HCG27-205ENST00000638546 USP35Q9P2H5 1018 aa20.54■□□□□ 0.88
HCG27-205ENST00000638546 DAXXQ9UER7 740 aaPredicted RBP20.54■□□□□ 0.88
HCG27-205ENST00000638546 EXOC6BQ9Y2D4 811 aa20.54■□□□□ 0.88
HCG27-205ENST00000638546 MFAP1P55081 439 aaKnown RBP20.53■□□□□ 0.88
HCG27-205ENST00000638546 PPP1R42Q7Z4L9 355 aa20.53■□□□□ 0.88
HCG27-205ENST00000638546 LRRCC1Q9C099 1032 aa20.53■□□□□ 0.88
HCG27-205ENST00000638546 C9orf78Q9NZ63 289 aaPredicted RBP20.53■□□□□ 0.88
HCG27-205ENST00000638546 IBTKQ9P2D0 1353 aaPredicted RBP20.53■□□□□ 0.88
HCG27-205ENST00000638546 COPS6Q7L5N1 327 aa20.53■□□□□ 0.88
HCG27-205ENST00000638546 OTUD7AQ8TE49 926 aaPredicted RBP20.53■□□□□ 0.88
HCG27-205ENST00000638546 C5P01031 1676 aa20.52■□□□□ 0.88
HCG27-205ENST00000638546 ERBB4Q15303 1308 aa20.52■□□□□ 0.88
HCG27-205ENST00000638546 RAB11FIP3O75154 756 aa20.52■□□□□ 0.88
HCG27-205ENST00000638546 GSPT1P15170 499 aaKnown RBP20.52■□□□□ 0.88
HCG27-205ENST00000638546 LRP10Q7Z4F1 713 aa20.52■□□□□ 0.88
HCG27-205ENST00000638546 CDC45O75419 566 aa20.51■□□□□ 0.87
HCG27-205ENST00000638546 C22orf23Q9BZE7 217 aa20.51■□□□□ 0.87
HCG27-205ENST00000638546 BCL11AQ9H165 835 aa20.51■□□□□ 0.87
HCG27-205ENST00000638546 EIF5BO60841 1220 aaKnown RBP20.5■□□□□ 0.87
HCG27-205ENST00000638546 NEXNQ0ZGT2 675 aa20.5■□□□□ 0.87
HCG27-205ENST00000638546 CWF19L2Q2TBE0 894 aaKnown RBP20.5■□□□□ 0.87
HCG27-205ENST00000638546 METTL22Q9BUU2 404 aaPredicted RBP20.5■□□□□ 0.87
HCG27-205ENST00000638546 OSBPL3Q9H4L5 887 aa20.5■□□□□ 0.87
HCG27-205ENST00000638546 DISP2A7MBM2 1401 aa20.5■□□□□ 0.87
HCG27-205ENST00000638546 UTYO14607 1347 aa20.5■□□□□ 0.87
HCG27-205ENST00000638546 SRGAP3O43295 1099 aa20.49■□□□□ 0.87
HCG27-205ENST00000638546 HSPA1LP34931 641 aa20.49■□□□□ 0.87
HCG27-205ENST00000638546 MTX1Q13505 466 aa20.49■□□□□ 0.87
HCG27-205ENST00000638546 ANKRD13DQ6ZTN6 518 aa20.49■□□□□ 0.87
HCG27-205ENST00000638546 TMOD3Q9NYL9 352 aa20.49■□□□□ 0.87
HCG27-205ENST00000638546 GRM8O00222 908 aa20.49■□□□□ 0.87
HCG27-205ENST00000638546 TBC1D9Q6ZT07 1266 aa20.49■□□□□ 0.87
HCG27-205ENST00000638546 SURF6O75683 361 aaKnown RBP20.48■□□□□ 0.87
HCG27-205ENST00000638546 SHANK3Q9BYB0 1731 aa20.47■□□□□ 0.87
HCG27-205ENST00000638546 TNS2Q63HR2 1409 aa20.47■□□□□ 0.87
HCG27-205ENST00000638546 IGKV5-2P06315 115 aa20.47■□□□□ 0.87
HCG27-205ENST00000638546 PDE1AP54750 535 aa20.47■□□□□ 0.87
HCG27-205ENST00000638546 BECN1Q14457 450 aa20.47■□□□□ 0.87
HCG27-205ENST00000638546 HSP90AB4PQ58FF6 505 aa20.47■□□□□ 0.87
HCG27-205ENST00000638546 NEURL1BA8MQ27 555 aa20.46■□□□□ 0.87
HCG27-205ENST00000638546 MYD88Q99836 296 aa20.46■□□□□ 0.87
HCG27-205ENST00000638546 KCPQ6ZWJ8 1503 aa20.46■□□□□ 0.87
HCG27-205ENST00000638546 GLI3P10071 1580 aa20.46■□□□□ 0.87
HCG27-205ENST00000638546 EXOC5O00471 708 aa20.45■□□□□ 0.87
HCG27-205ENST00000638546 ADAMTS2O95450 1211 aa20.45■□□□□ 0.87
HCG27-205ENST00000638546 SLC4A3P48751 1232 aa20.45■□□□□ 0.87
HCG27-205ENST00000638546 SALL3Q9BXA9 1300 aa20.45■□□□□ 0.86
HCG27-205ENST00000638546 JCADQ9P266 1359 aa20.45■□□□□ 0.86
HCG27-205ENST00000638546 NBPF26B4DH59 902 aa20.45■□□□□ 0.86
HCG27-205ENST00000638546 PTCD1O75127 700 aaKnown RBP20.45■□□□□ 0.86
HCG27-205ENST00000638546 SDSP20132 328 aa20.45■□□□□ 0.86
HCG27-205ENST00000638546 PIP4K2AP48426 406 aaPredicted RBP20.45■□□□□ 0.86
HCG27-205ENST00000638546 NBPF14Q5TI25 921 aa20.45■□□□□ 0.86
HCG27-205ENST00000638546 NBPF10Q6P3W6 841 aaKnown RBP20.45■□□□□ 0.86
HCG27-205ENST00000638546 NBPF15Q8N660 670 aa20.45■□□□□ 0.86
HCG27-205ENST00000638546 PLBD2Q8NHP8 589 aa20.45■□□□□ 0.86
HCG27-205ENST00000638546 CDCA7Q9BWT1 371 aaPredicted RBP20.45■□□□□ 0.86
HCG27-205ENST00000638546 GCKRQ14397 625 aa20.44■□□□□ 0.86
HCG27-205ENST00000638546 SUCLG2Q96I99 432 aa20.44■□□□□ 0.86
HCG27-205ENST00000638546 STAP2Q9UGK3 403 aa20.44■□□□□ 0.86
HCG27-205ENST00000638546 PAPPAQ13219 1627 aa20.43■□□□□ 0.86
HCG27-205ENST00000638546 MX1P20591 662 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms