RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 MEGF6O75095 1541 aa26.48■■□□□ 1.83
CLN6-224ENST00000638076 PHKG2P15735 406 aa26.48■■□□□ 1.83
CLN6-224ENST00000638076 POLA2Q14181 598 aa26.48■■□□□ 1.83
CLN6-224ENST00000638076 MAP3K2Q9Y2U5 619 aa26.47■■□□□ 1.83
CLN6-224ENST00000638076 KDM6AO15550 1401 aaPredicted RBP26.47■■□□□ 1.83
CLN6-224ENST00000638076 SLC52A2Q9HAB3 445 aa26.47■■□□□ 1.83
CLN6-224ENST00000638076 SRGAP3O43295 1099 aa26.46■■□□□ 1.83
CLN6-224ENST00000638076 SURF6O75683 361 aaKnown RBP26.45■■□□□ 1.83
CLN6-224ENST00000638076 SLC39A6Q13433 755 aa26.45■■□□□ 1.83
CLN6-224ENST00000638076 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.45■■□□□ 1.83
CLN6-224ENST00000638076 CRYBG1Q9Y4K1 1723 aa26.45■■□□□ 1.83
CLN6-224ENST00000638076 ZNF790Q6PG37 636 aa26.45■■□□□ 1.82
CLN6-224ENST00000638076 KSR2Q6VAB6 950 aa26.45■■□□□ 1.82
CLN6-224ENST00000638076 K7ELQ4 463 aaPredicted RBP26.44■■□□□ 1.82
CLN6-224ENST00000638076 HYPKQ9NX55 129 aa26.44■■□□□ 1.82
CLN6-224ENST00000638076 RAB11FIP3O75154 756 aa26.44■■□□□ 1.82
CLN6-224ENST00000638076 REC8O95072 547 aa26.44■■□□□ 1.82
CLN6-224ENST00000638076 DDIT3P35638 169 aa26.44■■□□□ 1.82
CLN6-224ENST00000638076 IFNL2Q8IZJ0 200 aa26.44■■□□□ 1.82
CLN6-224ENST00000638076 IL1RAPL2Q9NP60 686 aa26.44■■□□□ 1.82
CLN6-224ENST00000638076 STAP2Q9UGK3 403 aa26.44■■□□□ 1.82
CLN6-224ENST00000638076 ERC2O15083 957 aa26.43■■□□□ 1.82
CLN6-224ENST00000638076 NFATC2IPQ8NCF5 419 aa26.43■■□□□ 1.82
CLN6-224ENST00000638076 RABEP1Q15276 862 aa26.43■■□□□ 1.82
CLN6-224ENST00000638076 BRINP3Q76B58 766 aa26.42■■□□□ 1.82
CLN6-224ENST00000638076 SCN11AQ9UI33 1791 aa26.42■■□□□ 1.82
CLN6-224ENST00000638076 ALDH1L1O75891 902 aa26.42■■□□□ 1.82
CLN6-224ENST00000638076 DDX21Q9NR30 783 aaKnown RBP eCLIP26.42■■□□□ 1.82
CLN6-224ENST00000638076 ABCC6O95255 1503 aa26.41■■□□□ 1.82
CLN6-224ENST00000638076 CPDO75976 1380 aa26.41■■□□□ 1.82
CLN6-224ENST00000638076 XIRP1Q702N8 1843 aaKnown RBP26.4■■□□□ 1.82
CLN6-224ENST00000638076 TRIM6-TRIM34B2RNG4 842 aa26.4■■□□□ 1.82
CLN6-224ENST00000638076 HSP90AA1P07900 732 aaKnown RBP26.4■■□□□ 1.82
CLN6-224ENST00000638076 RHPN1Q8TCX5 695 aa26.4■■□□□ 1.82
CLN6-224ENST00000638076 C9orf78Q9NZ63 289 aaPredicted RBP26.4■■□□□ 1.82
CLN6-224ENST00000638076 PDIA6Q15084 440 aa26.39■■□□□ 1.82
CLN6-224ENST00000638076 TUBGCP6Q96RT7 1819 aa26.39■■□□□ 1.82
CLN6-224ENST00000638076 CWF19L2Q2TBE0 894 aaKnown RBP26.39■■□□□ 1.81
CLN6-224ENST00000638076 RILPL2Q969X0 211 aa26.39■■□□□ 1.81
CLN6-224ENST00000638076 CYP27B1O15528 508 aa26.38■■□□□ 1.81
CLN6-224ENST00000638076 AIMP1Q12904 312 aaKnown RBP26.38■■□□□ 1.81
CLN6-224ENST00000638076 NUTM1Q86Y26 1132 aa26.38■■□□□ 1.81
CLN6-224ENST00000638076 KIF1BPQ96EK5 621 aa26.38■■□□□ 1.81
CLN6-224ENST00000638076 AOX1Q06278 1338 aa26.38■■□□□ 1.81
CLN6-224ENST00000638076 DDX58O95786 925 aaKnown RBP26.38■■□□□ 1.81
CLN6-224ENST00000638076 MCM4P33991 863 aa26.38■■□□□ 1.81
CLN6-224ENST00000638076 DCAF5Q96JK2 942 aa26.38■■□□□ 1.81
CLN6-224ENST00000638076 FOXD4L1Q9NU39 408 aa26.37■■□□□ 1.81
CLN6-224ENST00000638076 PLEKHG2Q9H7P9 1386 aa26.37■■□□□ 1.81
CLN6-224ENST00000638076 CIZ1Q9ULV3 898 aaPredicted RBP26.36■■□□□ 1.81
CLN6-224ENST00000638076 MTX1Q13505 466 aa26.36■■□□□ 1.81
CLN6-224ENST00000638076 HSP90AB4PQ58FF6 505 aa26.35■■□□□ 1.81
CLN6-224ENST00000638076 LINS1Q8NG48 757 aa26.35■■□□□ 1.81
CLN6-224ENST00000638076 ZNF496Q96IT1 587 aaPredicted RBP26.35■■□□□ 1.81
CLN6-224ENST00000638076 ESYT1Q9BSJ8 1104 aa26.35■■□□□ 1.81
CLN6-224ENST00000638076 UNC5CLQ8IV45 518 aa26.34■■□□□ 1.81
CLN6-224ENST00000638076 C5P01031 1676 aa26.34■■□□□ 1.81
CLN6-224ENST00000638076 CHMLP26374 656 aa26.34■■□□□ 1.81
CLN6-224ENST00000638076 MYL6BP14649 208 aa26.33■■□□□ 1.81
CLN6-224ENST00000638076 TTC5Q8N0Z6 440 aa26.33■■□□□ 1.81
CLN6-224ENST00000638076 HDAC5Q9UQL6 1122 aa26.33■■□□□ 1.81
CLN6-224ENST00000638076 MRC1P22897 1456 aa26.32■■□□□ 1.8
CLN6-224ENST00000638076 PKD1L3Q7Z443 1732 aa26.32■■□□□ 1.8
CLN6-224ENST00000638076 RIC3Q7Z5B4 369 aa26.32■■□□□ 1.8
CLN6-224ENST00000638076 PRDM11Q9NQV5 511 aa26.32■■□□□ 1.8
CLN6-224ENST00000638076 GRM8O00222 908 aa26.31■■□□□ 1.8
CLN6-224ENST00000638076 OS9Q13438 667 aaPredicted RBP26.31■■□□□ 1.8
CLN6-224ENST00000638076 SLAIN2Q9P270 581 aa26.31■■□□□ 1.8
CLN6-224ENST00000638076 PI4K2BQ8TCG2 481 aa26.31■■□□□ 1.8
CLN6-224ENST00000638076 SNRPA1P09661 255 aaKnown RBP26.3■■□□□ 1.8
CLN6-224ENST00000638076 STRCQ7RTU9 1775 aa26.3■■□□□ 1.8
CLN6-224ENST00000638076 CABP4P57796 275 aa26.3■■□□□ 1.8
CLN6-224ENST00000638076 XAGE3Q8WTP9 111 aa26.3■■□□□ 1.8
CLN6-224ENST00000638076 UTYO14607 1347 aa26.29■■□□□ 1.8
CLN6-224ENST00000638076 SOS2Q07890 1332 aaPredicted RBP26.29■■□□□ 1.8
CLN6-224ENST00000638076 RAB3GAP1Q15042 981 aa26.29■■□□□ 1.8
CLN6-224ENST00000638076 LARP1Q6PKG0 1096 aaKnown RBP26.29■■□□□ 1.8
CLN6-224ENST00000638076 TNPO1Q92973 898 aaKnown RBP26.29■■□□□ 1.8
CLN6-224ENST00000638076 ZNF335Q9H4Z2 1342 aaPredicted RBP26.29■■□□□ 1.8
CLN6-224ENST00000638076 USP16Q9Y5T5 823 aa26.29■■□□□ 1.8
CLN6-224ENST00000638076 ST18O60284 1047 aa26.28■■□□□ 1.8
CLN6-224ENST00000638076 IGKV5-2P06315 115 aa26.28■■□□□ 1.8
CLN6-224ENST00000638076 COPS6Q7L5N1 327 aa26.28■■□□□ 1.8
CLN6-224ENST00000638076 SUCLG2Q96I99 432 aa26.28■■□□□ 1.8
CLN6-224ENST00000638076 FMNL2Q96PY5 1086 aa26.28■■□□□ 1.8
CLN6-224ENST00000638076 WDR17Q8IZU2 1322 aa26.27■■□□□ 1.8
CLN6-224ENST00000638076 MAP4K4O95819 1239 aaPredicted RBP26.27■■□□□ 1.8
CLN6-224ENST00000638076 PA2G4Q9UQ80 394 aaKnown RBP26.27■■□□□ 1.8
CLN6-224ENST00000638076 TOM1L2Q6ZVM7 507 aa26.27■■□□□ 1.8
CLN6-224ENST00000638076 KAZALD1Q96I82 304 aa26.27■■□□□ 1.8
CLN6-224ENST00000638076 ANO2Q9NQ90 1003 aa26.27■■□□□ 1.8
CLN6-224ENST00000638076 NEXNQ0ZGT2 675 aa26.26■■□□□ 1.79
CLN6-224ENST00000638076 BICC1Q9H694 974 aaKnown RBP26.26■■□□□ 1.79
CLN6-224ENST00000638076 PIP4K2AP48426 406 aaPredicted RBP26.25■■□□□ 1.79
CLN6-224ENST00000638076 CLASRPQ8N2M8 674 aaKnown RBP26.25■■□□□ 1.79
CLN6-224ENST00000638076 KDM4FA0A1W2PPD8 638 aa26.24■■□□□ 1.79
CLN6-224ENST00000638076 NEURL1BA8MQ27 555 aa26.24■■□□□ 1.79
CLN6-224ENST00000638076 LRP10Q7Z4F1 713 aa26.24■■□□□ 1.79
CLN6-224ENST00000638076 DDX11L8A8MPP1 907 aa26.23■■□□□ 1.79
CLN6-224ENST00000638076 MCCP23508 829 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms