RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	JMY	Q8N9B5	988 aa		12.79	□□□□□ -0.36
CACNA1A-256	ENST00000637981	TNRC6C	Q9HCJ0	1690 aa	Known RBP	12.78	□□□□□ -0.36
CACNA1A-256	ENST00000637981	ZPR1	O75312	459 aa		12.78	□□□□□ -0.36
CACNA1A-256	ENST00000637981	TM4SF1	P30408	202 aa		12.78	□□□□□ -0.36
CACNA1A-256	ENST00000637981	COL13A1	Q5TAT6	717 aa	Predicted RBP	12.78	□□□□□ -0.36
CACNA1A-256	ENST00000637981	INTS5	Q6P9B9	1019 aa	Known RBP	12.78	□□□□□ -0.36
CACNA1A-256	ENST00000637981	USPL1	Q5W0Q7	1092 aa		12.77	□□□□□ -0.37
CACNA1A-256	ENST00000637981	SULT6B1	Q6IMI4	303 aa		12.77	□□□□□ -0.37
CACNA1A-256	ENST00000637981	SMC1B	Q8NDV3	1235 aa		12.77	□□□□□ -0.37
CACNA1A-256	ENST00000637981	ADAMTS7	Q9UKP4	1686 aa		12.77	□□□□□ -0.37
CACNA1A-256	ENST00000637981	VIRMA	Q69YN4	1812 aa	Known RBP	12.77	□□□□□ -0.37
CACNA1A-256	ENST00000637981	SBF1	O95248	1867 aa		12.77	□□□□□ -0.37
CACNA1A-256	ENST00000637981	RASSF7	Q02833	373 aa		12.76	□□□□□ -0.37
CACNA1A-256	ENST00000637981	DDX10	Q13206	875 aa	Known RBP	12.76	□□□□□ -0.37
CACNA1A-256	ENST00000637981	MORC1	Q86VD1	984 aa		12.76	□□□□□ -0.37
CACNA1A-256	ENST00000637981	DNAJC10	Q8IXB1	793 aa		12.76	□□□□□ -0.37
CACNA1A-256	ENST00000637981	SCN11A	Q9UI33	1791 aa		12.75	□□□□□ -0.37
CACNA1A-256	ENST00000637981	SOS1	Q07889	1333 aa	Predicted RBP	12.75	□□□□□ -0.37
CACNA1A-256	ENST00000637981	PER1	O15534	1290 aa	Predicted RBP	12.75	□□□□□ -0.37
CACNA1A-256	ENST00000637981	NPC1L1	Q9UHC9	1359 aa		12.74	□□□□□ -0.37
CACNA1A-256	ENST00000637981	ZC3H4	Q9UPT8	1303 aa	Known RBP	12.74	□□□□□ -0.37
CACNA1A-256	ENST00000637981	NFIX	Q14938	502 aa		12.74	□□□□□ -0.37
CACNA1A-256	ENST00000637981	AKAP4	Q5JQC9	854 aa		12.74	□□□□□ -0.37
CACNA1A-256	ENST00000637981	SLC52A2	Q9HAB3	445 aa		12.74	□□□□□ -0.37
CACNA1A-256	ENST00000637981	COL15A1	P39059	1388 aa		12.73	□□□□□ -0.37
CACNA1A-256	ENST00000637981	GLTPD2	A6NH11	291 aa		12.73	□□□□□ -0.37
CACNA1A-256	ENST00000637981	CAPN15	O75808	1086 aa		12.73	□□□□□ -0.37
CACNA1A-256	ENST00000637981	CYP19A1	P11511	503 aa	Predicted RBP	12.73	□□□□□ -0.37
CACNA1A-256	ENST00000637981	LMNB1	P20700	586 aa		12.73	□□□□□ -0.37
CACNA1A-256	ENST00000637981	IL13	P35225	146 aa		12.73	□□□□□ -0.37
CACNA1A-256	ENST00000637981	AFDN	P55196	1824 aa	Known RBP	12.73	□□□□□ -0.37
CACNA1A-256	ENST00000637981	SERPINB2	P05120	415 aa		12.72	□□□□□ -0.37
CACNA1A-256	ENST00000637981	VEGFA	P15692	232 aa	Predicted RBP	12.72	□□□□□ -0.37
CACNA1A-256	ENST00000637981	PRELP	P51888	382 aa		12.72	□□□□□ -0.37
CACNA1A-256	ENST00000637981	SLC39A6	Q13433	755 aa		12.72	□□□□□ -0.37
CACNA1A-256	ENST00000637981	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.72	□□□□□ -0.37
CACNA1A-256	ENST00000637981	TNS4	Q8IZW8	715 aa		12.72	□□□□□ -0.37
CACNA1A-256	ENST00000637981	TTLL6	Q8N841	843 aa		12.72	□□□□□ -0.37
CACNA1A-256	ENST00000637981	LGR6	Q9HBX8	967 aa		12.72	□□□□□ -0.37
CACNA1A-256	ENST00000637981	NARF	Q9UHQ1	456 aa		12.72	□□□□□ -0.37
CACNA1A-256	ENST00000637981	NRXN2	Q9P2S2	1712 aa		12.72	□□□□□ -0.37
CACNA1A-256	ENST00000637981	RNMT	O43148	476 aa	Known RBP	12.71	□□□□□ -0.37
CACNA1A-256	ENST00000637981	ZBTB1	Q9Y2K1	713 aa		12.71	□□□□□ -0.37
CACNA1A-256	ENST00000637981	DLEC1	Q9Y238	1755 aa		12.71	□□□□□ -0.37
CACNA1A-256	ENST00000637981	MRC1	P22897	1456 aa		12.71	□□□□□ -0.37
CACNA1A-256	ENST00000637981	TIAM2	Q8IVF5	1701 aa		12.7	□□□□□ -0.38
CACNA1A-256	ENST00000637981	C2CD5	Q86YS7	1000 aa		12.7	□□□□□ -0.38
CACNA1A-256	ENST00000637981	BCL2L12	Q9HB09	334 aa		12.7	□□□□□ -0.38
CACNA1A-256	ENST00000637981	COL3A1	P02461	1466 aa	Predicted RBP	12.69	□□□□□ -0.38
CACNA1A-256	ENST00000637981		H0YIN7	160 aa		12.69	□□□□□ -0.38
CACNA1A-256	ENST00000637981	CARMIL3	Q8ND23	1372 aa		12.69	□□□□□ -0.38
CACNA1A-256	ENST00000637981	NFKBIE	O00221	500 aa		12.68	□□□□□ -0.38
CACNA1A-256	ENST00000637981	HMOX1	P09601	288 aa		12.68	□□□□□ -0.38
CACNA1A-256	ENST00000637981	HSPA1A	P0DMV8	641 aa	Known RBP	12.68	□□□□□ -0.38
CACNA1A-256	ENST00000637981	HSPA1B	P0DMV9	641 aa	Known RBP	12.68	□□□□□ -0.38
CACNA1A-256	ENST00000637981	CANX	P27824	592 aa	Known RBP	12.68	□□□□□ -0.38
CACNA1A-256	ENST00000637981	CC2D1B	Q5T0F9	858 aa	Known RBP	12.68	□□□□□ -0.38
CACNA1A-256	ENST00000637981	BICDL1	Q6ZP65	573 aa		12.68	□□□□□ -0.38
CACNA1A-256	ENST00000637981	VSIG10	Q8N0Z9	540 aa		12.68	□□□□□ -0.38
CACNA1A-256	ENST00000637981	CCDC88A	Q3V6T2	1871 aa		12.67	□□□□□ -0.38
CACNA1A-256	ENST00000637981	DPY19L2	Q6NUT2	758 aa		12.67	□□□□□ -0.38
CACNA1A-256	ENST00000637981	PCNT	O95613	3336 aa		12.67	□□□□□ -0.38
CACNA1A-256	ENST00000637981	POTEC	B2RU33	542 aa		12.66	□□□□□ -0.38
CACNA1A-256	ENST00000637981	MTHFSD	Q2M296	383 aa	Known RBP	12.66	□□□□□ -0.38
CACNA1A-256	ENST00000637981	ZNF622	Q969S3	477 aa	Known RBP eCLIP	12.66	□□□□□ -0.38
CACNA1A-256	ENST00000637981	UBR2	Q8IWV8	1755 aa		12.66	□□□□□ -0.38
CACNA1A-256	ENST00000637981	STARD3NL	O95772	234 aa		12.65	□□□□□ -0.38
CACNA1A-256	ENST00000637981	RALBP1	Q15311	655 aa		12.65	□□□□□ -0.38
CACNA1A-256	ENST00000637981	TTC5	Q8N0Z6	440 aa		12.65	□□□□□ -0.38
CACNA1A-256	ENST00000637981	ZNF219	Q9P2Y4	722 aa	Predicted RBP	12.65	□□□□□ -0.38
CACNA1A-256	ENST00000637981		A0A087WZG4	1122 aa		12.64	□□□□□ -0.39
CACNA1A-256	ENST00000637981	C21orf2	O43822	256 aa		12.64	□□□□□ -0.39
CACNA1A-256	ENST00000637981	PDE6B	P35913	854 aa		12.64	□□□□□ -0.39
CACNA1A-256	ENST00000637981	EIF5	P55010	431 aa	Known RBP	12.64	□□□□□ -0.39
CACNA1A-256	ENST00000637981	ERFE	Q4G0M1	354 aa		12.64	□□□□□ -0.39
CACNA1A-256	ENST00000637981	TBC1D9B	Q66K14	1250 aa		12.64	□□□□□ -0.39
CACNA1A-256	ENST00000637981	SIPA1L3	O60292	1781 aa	Predicted RBP	12.64	□□□□□ -0.39
CACNA1A-256	ENST00000637981	ANKRD31	Q8N7Z5	1873 aa		12.64	□□□□□ -0.39
CACNA1A-256	ENST00000637981	CNGB1	Q14028	1251 aa	Predicted RBP	12.63	□□□□□ -0.39
CACNA1A-256	ENST00000637981	CCDC24	Q8N4L8	307 aa		12.63	□□□□□ -0.39
CACNA1A-256	ENST00000637981	BRIP1	Q9BX63	1249 aa		12.63	□□□□□ -0.39
CACNA1A-256	ENST00000637981	PDZRN3	Q9UPQ7	1066 aa		12.63	□□□□□ -0.39
CACNA1A-256	ENST00000637981	ZNF330	Q9Y3S2	320 aa	Predicted RBP	12.63	□□□□□ -0.39
CACNA1A-256	ENST00000637981	PRR5L	Q6MZQ0	368 aa		12.62	□□□□□ -0.39
CACNA1A-256	ENST00000637981	COL11A2	P13942	1736 aa	Predicted RBP	12.62	□□□□□ -0.39
CACNA1A-256	ENST00000637981	SCN7A	Q01118	1682 aa		12.62	□□□□□ -0.39
CACNA1A-256	ENST00000637981	FER1L6	Q2WGJ9	1857 aa		12.62	□□□□□ -0.39
CACNA1A-256	ENST00000637981	NPHP1	O15259	732 aa		12.62	□□□□□ -0.39
CACNA1A-256	ENST00000637981	ANP32C	O43423	234 aa		12.62	□□□□□ -0.39
CACNA1A-256	ENST00000637981	DIAPH1	O60610	1272 aa	Known RBP	12.62	□□□□□ -0.39
CACNA1A-256	ENST00000637981	ZNF496	Q96IT1	587 aa	Predicted RBP	12.62	□□□□□ -0.39
CACNA1A-256	ENST00000637981	TAOK3	Q9H2K8	898 aa		12.62	□□□□□ -0.39
CACNA1A-256	ENST00000637981	CREBZF	Q9NS37	354 aa		12.62	□□□□□ -0.39
CACNA1A-256	ENST00000637981	TBC1D2B	Q9UPU7	963 aa		12.62	□□□□□ -0.39
CACNA1A-256	ENST00000637981	DICER1	Q9UPY3	1922 aa	Known RBP	12.61	□□□□□ -0.39
CACNA1A-256	ENST00000637981	LTBP3	Q9NS15	1303 aa		12.61	□□□□□ -0.39
CACNA1A-256	ENST00000637981	HEG1	Q9ULI3	1381 aa		12.61	□□□□□ -0.39
CACNA1A-256	ENST00000637981	DDN	O94850	711 aa	Predicted RBP	12.61	□□□□□ -0.39
CACNA1A-256	ENST00000637981	TEF	Q10587	303 aa		12.61	□□□□□ -0.39
CACNA1A-256	ENST00000637981	CHADL	Q6NUI6	762 aa		12.61	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms