RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 DCAF5Q96JK2 942 aa23.21■■□□□ 1.31
CLN5-219ENST00000637537 FRAT2O75474 233 aaPredicted RBP23.21■■□□□ 1.31
CLN5-219ENST00000637537 AIMP1Q12904 312 aaKnown RBP23.21■■□□□ 1.31
CLN5-219ENST00000637537 ZNF496Q96IT1 587 aaPredicted RBP23.21■■□□□ 1.31
CLN5-219ENST00000637537 C22orf23Q9BZE7 217 aa23.21■■□□□ 1.31
CLN5-219ENST00000637537 COL5A2P05997 1499 aaPredicted RBP23.2■■□□□ 1.31
CLN5-219ENST00000637537 ATP8B2P98198 1209 aa23.2■■□□□ 1.3
CLN5-219ENST00000637537 LARP1Q6PKG0 1096 aaKnown RBP23.2■■□□□ 1.3
CLN5-219ENST00000637537 CHMP4AQ9BY43 222 aa23.2■■□□□ 1.3
CLN5-219ENST00000637537 MAP3K2Q9Y2U5 619 aa23.2■■□□□ 1.3
CLN5-219ENST00000637537 PIP4K2AP48426 406 aaPredicted RBP23.18■■□□□ 1.3
CLN5-219ENST00000637537 TBC1D9Q6ZT07 1266 aa23.18■■□□□ 1.3
CLN5-219ENST00000637537 N4BP2Q86UW6 1770 aaPredicted RBP23.18■■□□□ 1.3
CLN5-219ENST00000637537 MYL6BP14649 208 aa23.18■■□□□ 1.3
CLN5-219ENST00000637537 PDIA6Q15084 440 aa23.18■■□□□ 1.3
CLN5-219ENST00000637537 PKD1L3Q7Z443 1732 aa23.17■■□□□ 1.3
CLN5-219ENST00000637537 ABCA3Q99758 1704 aa23.17■■□□□ 1.3
CLN5-219ENST00000637537 CABP4P57796 275 aa23.17■■□□□ 1.3
CLN5-219ENST00000637537 EVA1CP58658 441 aa23.17■■□□□ 1.3
CLN5-219ENST00000637537 CWF19L2Q2TBE0 894 aaKnown RBP23.16■■□□□ 1.3
CLN5-219ENST00000637537 TTC22Q5TAA0 569 aa23.16■■□□□ 1.3
CLN5-219ENST00000637537 ZCRB1Q8TBF4 217 aaKnown RBP23.16■■□□□ 1.3
CLN5-219ENST00000637537 TTC5Q8N0Z6 440 aa23.16■■□□□ 1.3
CLN5-219ENST00000637537 USP16Q9Y5T5 823 aa23.16■■□□□ 1.3
CLN5-219ENST00000637537 C5P01031 1676 aa23.15■■□□□ 1.3
CLN5-219ENST00000637537 TSHZ3Q63HK5 1081 aa23.15■■□□□ 1.3
CLN5-219ENST00000637537 DDX54Q8TDD1 881 aaKnown RBP23.15■■□□□ 1.3
CLN5-219ENST00000637537 NHSL1Q5SYE7 1610 aa23.15■■□□□ 1.3
CLN5-219ENST00000637537 KSR2Q6VAB6 950 aa23.15■■□□□ 1.3
CLN5-219ENST00000637537 DDX21Q9NR30 783 aaKnown RBP eCLIP23.15■■□□□ 1.3
CLN5-219ENST00000637537 HYPKQ9NX55 129 aa23.15■■□□□ 1.3
CLN5-219ENST00000637537 PPP1R42Q7Z4L9 355 aa23.14■■□□□ 1.3
CLN5-219ENST00000637537 HSP90AB1P08238 724 aaKnown RBP23.13■■□□□ 1.29
CLN5-219ENST00000637537 IL2RBP14784 551 aa23.13■■□□□ 1.29
CLN5-219ENST00000637537 CARD10Q9BWT7 1032 aa23.12■■□□□ 1.29
CLN5-219ENST00000637537 LRRCC1Q9C099 1032 aa23.12■■□□□ 1.29
CLN5-219ENST00000637537 PCDH11XQ9BZA7 1347 aa23.11■■□□□ 1.29
CLN5-219ENST00000637537 PCDH11YQ9BZA8 1340 aa23.11■■□□□ 1.29
CLN5-219ENST00000637537 SRGAP3O43295 1099 aa23.11■■□□□ 1.29
CLN5-219ENST00000637537 SDSP20132 328 aa23.11■■□□□ 1.29
CLN5-219ENST00000637537 BTG4Q9NY30 223 aa23.11■■□□□ 1.29
CLN5-219ENST00000637537 MRC1P22897 1456 aa23.1■■□□□ 1.29
CLN5-219ENST00000637537 IBTKQ9P2D0 1353 aaPredicted RBP23.1■■□□□ 1.29
CLN5-219ENST00000637537 CDC45O75419 566 aa23.1■■□□□ 1.29
CLN5-219ENST00000637537 SNRPA1P09661 255 aaKnown RBP23.1■■□□□ 1.29
CLN5-219ENST00000637537 SSH3Q8TE77 659 aa23.1■■□□□ 1.29
CLN5-219ENST00000637537 C9orf78Q9NZ63 289 aaPredicted RBP23.1■■□□□ 1.29
CLN5-219ENST00000637537 FMNL2Q96PY5 1086 aa23.1■■□□□ 1.29
CLN5-219ENST00000637537 TBC1D2Q9BYX2 928 aa23.1■■□□□ 1.29
CLN5-219ENST00000637537 IL1RAPL2Q9NP60 686 aa23.1■■□□□ 1.29
CLN5-219ENST00000637537 BECN1Q14457 450 aa23.09■■□□□ 1.29
CLN5-219ENST00000637537 COPS6Q7L5N1 327 aa23.09■■□□□ 1.29
CLN5-219ENST00000637537 XAGE3Q8WTP9 111 aa23.09■■□□□ 1.29
CLN5-219ENST00000637537 PARP4Q9UKK3 1724 aaKnown RBP23.09■■□□□ 1.29
CLN5-219ENST00000637537 SURF6O75683 361 aaKnown RBP23.09■■□□□ 1.29
CLN5-219ENST00000637537 PDE1AP54750 535 aa23.09■■□□□ 1.29
CLN5-219ENST00000637537 RIC3Q7Z5B4 369 aa23.08■■□□□ 1.29
CLN5-219ENST00000637537 PLEKHG2Q9H7P9 1386 aa23.07■■□□□ 1.28
CLN5-219ENST00000637537 DDX58O95786 925 aaKnown RBP23.07■■□□□ 1.28
CLN5-219ENST00000637537 POLA2Q14181 598 aa23.06■■□□□ 1.28
CLN5-219ENST00000637537 SPRYD3Q8NCJ5 442 aa23.06■■□□□ 1.28
CLN5-219ENST00000637537 SLKQ9H2G2 1235 aaPredicted RBP23.06■■□□□ 1.28
CLN5-219ENST00000637537 ALDH1L1O75891 902 aa23.05■■□□□ 1.28
CLN5-219ENST00000637537 RBM25P49756 843 aaKnown RBP23.05■■□□□ 1.28
CLN5-219ENST00000637537 ROBO1Q9Y6N7 1651 aa23.05■■□□□ 1.28
CLN5-219ENST00000637537 PTCD1O75127 700 aaKnown RBP23.05■■□□□ 1.28
CLN5-219ENST00000637537 IGKV5-2P06315 115 aa23.05■■□□□ 1.28
CLN5-219ENST00000637537 LRP10Q7Z4F1 713 aa23.05■■□□□ 1.28
CLN5-219ENST00000637537 LINS1Q8NG48 757 aa23.05■■□□□ 1.28
CLN5-219ENST00000637537 SALL3Q9BXA9 1300 aa23.04■■□□□ 1.28
CLN5-219ENST00000637537 MX1P20591 662 aa23.04■■□□□ 1.28
CLN5-219ENST00000637537 OSBPL3Q9H4L5 887 aa23.03■■□□□ 1.28
CLN5-219ENST00000637537 NUTM1Q86Y26 1132 aa23.03■■□□□ 1.28
CLN5-219ENST00000637537 GRM8O00222 908 aa23.02■■□□□ 1.28
CLN5-219ENST00000637537 MYD88Q99836 296 aa23.02■■□□□ 1.28
CLN5-219ENST00000637537 SHANK3Q9BYB0 1731 aa23.02■■□□□ 1.28
CLN5-219ENST00000637537 ERVV-2B6SEH9 535 aa23.01■■□□□ 1.27
CLN5-219ENST00000637537 ANKRD13DQ6ZTN6 518 aa23.01■■□□□ 1.27
CLN5-219ENST00000637537 JARID2Q92833 1246 aaPredicted RBP23.01■■□□□ 1.27
CLN5-219ENST00000637537 SUCLG2Q96I99 432 aa23.01■■□□□ 1.27
CLN5-219ENST00000637537 NKX1-1Q15270 411 aaPredicted RBP23.01■■□□□ 1.27
CLN5-219ENST00000637537 RHPN1Q8TCX5 695 aa23.01■■□□□ 1.27
CLN5-219ENST00000637537 KAZALD1Q96I82 304 aa23.01■■□□□ 1.27
CLN5-219ENST00000637537 KIF2CQ99661 725 aa23.01■■□□□ 1.27
CLN5-219ENST00000637537 PA2G4Q9UQ80 394 aaKnown RBP23.01■■□□□ 1.27
CLN5-219ENST00000637537 GLI3P10071 1580 aa23■■□□□ 1.27
CLN5-219ENST00000637537 NEURL1BA8MQ27 555 aa22.99■■□□□ 1.27
CLN5-219ENST00000637537 BICC1Q9H694 974 aaKnown RBP22.99■■□□□ 1.27
CLN5-219ENST00000637537 RRAGDQ9NQL2 400 aaPredicted RBP22.99■■□□□ 1.27
CLN5-219ENST00000637537 NEXNQ0ZGT2 675 aa22.99■■□□□ 1.27
CLN5-219ENST00000637537 NBPF26B4DH59 902 aa22.98■■□□□ 1.27
CLN5-219ENST00000637537 NBPF14Q5TI25 921 aa22.98■■□□□ 1.27
CLN5-219ENST00000637537 NBPF10Q6P3W6 841 aaKnown RBP22.98■■□□□ 1.27
CLN5-219ENST00000637537 NBPF15Q8N660 670 aa22.98■■□□□ 1.27
CLN5-219ENST00000637537 RBM42Q9BTD8 480 aaKnown RBP22.98■■□□□ 1.27
CLN5-219ENST00000637537 METTL22Q9BUU2 404 aaPredicted RBP22.98■■□□□ 1.27
CLN5-219ENST00000637537 KAT6BQ8WYB5 2073 aa22.98■■□□□ 1.27
CLN5-219ENST00000637537 ATP5J2-PTCD1G3V325 749 aa22.97■■□□□ 1.27
CLN5-219ENST00000637537 RAB11FIP3O75154 756 aa22.97■■□□□ 1.27
CLN5-219ENST00000637537 A1BGP04217 495 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms