RNA–Protein interactions for RNA: ENST00000637239.2

TCF4-285, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 7,771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-285	ENST00000637239	SMC2	O95347	1197 aa		7.73	□□□□□ -1.17
TCF4-285	ENST00000637239	SSB	P05455	408 aa	Known RBP eCLIP	7.73	□□□□□ -1.17
TCF4-285	ENST00000637239	PDE6B	P35913	854 aa		7.73	□□□□□ -1.17
TCF4-285	ENST00000637239	TTF1	Q15361	905 aa	Predicted RBP	7.73	□□□□□ -1.17
TCF4-285	ENST00000637239	MNS1	Q8NEH6	495 aa		7.73	□□□□□ -1.17
TCF4-285	ENST00000637239	NLRP3	Q96P20	1036 aa		7.73	□□□□□ -1.17
TCF4-285	ENST00000637239	C22orf23	Q9BZE7	217 aa		7.73	□□□□□ -1.17
TCF4-285	ENST00000637239	TANGO6	Q9C0B7	1094 aa		7.73	□□□□□ -1.17
TCF4-285	ENST00000637239	ATP2B1	P20020	1258 aa		7.73	□□□□□ -1.17
TCF4-285	ENST00000637239	BRDT	Q58F21	947 aa	Predicted RBP	7.73	□□□□□ -1.17
TCF4-285	ENST00000637239	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	7.73	□□□□□ -1.17
TCF4-285	ENST00000637239	VEZT	Q9HBM0	779 aa		7.73	□□□□□ -1.17
TCF4-285	ENST00000637239	GPATCH8	Q9UKJ3	1502 aa	Known RBP	7.73	□□□□□ -1.17
TCF4-285	ENST00000637239	NUP153	P49790	1475 aa	Known RBP	7.73	□□□□□ -1.17
TCF4-285	ENST00000637239	PABPN1L	A6NDY0	278 aa	Known RBP	7.73	□□□□□ -1.17
TCF4-285	ENST00000637239	IL2RB	P14784	551 aa		7.73	□□□□□ -1.17
TCF4-285	ENST00000637239	SKIDA1	Q1XH10	827 aa		7.73	□□□□□ -1.17
TCF4-285	ENST00000637239	RBM26	Q5T8P6	1007 aa	Known RBP	7.73	□□□□□ -1.17
TCF4-285	ENST00000637239	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	7.73	□□□□□ -1.17
TCF4-285	ENST00000637239	RNF41	Q9H4P4	317 aa	Predicted RBP	7.73	□□□□□ -1.17
TCF4-285	ENST00000637239	PICK1	Q9NRD5	415 aa		7.73	□□□□□ -1.17
TCF4-285	ENST00000637239	TMOD4	Q9NZQ9	345 aa		7.73	□□□□□ -1.17
TCF4-285	ENST00000637239	FLAD1	Q8NFF5	587 aa		7.72	□□□□□ -1.17
TCF4-285	ENST00000637239	RAB34	Q9BZG1	259 aa		7.72	□□□□□ -1.17
TCF4-285	ENST00000637239	KIF4A	O95239	1232 aa		7.72	□□□□□ -1.17
TCF4-285	ENST00000637239	CCDC178	Q5BJE1	867 aa		7.72	□□□□□ -1.17
TCF4-285	ENST00000637239	MAP7D2	Q96T17	732 aa		7.72	□□□□□ -1.17
TCF4-285	ENST00000637239	CWC25	Q9NXE8	425 aa	Predicted RBP	7.72	□□□□□ -1.17
TCF4-285	ENST00000637239		H0YIN7	160 aa		7.72	□□□□□ -1.17
TCF4-285	ENST00000637239	PLS1	Q14651	629 aa		7.72	□□□□□ -1.17
TCF4-285	ENST00000637239	FBXO31	Q5XUX0	539 aa	Predicted RBP	7.72	□□□□□ -1.17
TCF4-285	ENST00000637239	CCDC12	Q8WUD4	166 aa	Predicted RBP	7.72	□□□□□ -1.17
TCF4-285	ENST00000637239	ZNF428	Q96B54	188 aa		7.72	□□□□□ -1.17
TCF4-285	ENST00000637239	SDF4	Q9BRK5	362 aa		7.72	□□□□□ -1.17
TCF4-285	ENST00000637239	PDC	P20941	246 aa		7.72	□□□□□ -1.17
TCF4-285	ENST00000637239	TMEM266	Q2M3C6	531 aa		7.72	□□□□□ -1.17
TCF4-285	ENST00000637239	EAPP	Q56P03	285 aa	Predicted RBP	7.72	□□□□□ -1.17
TCF4-285	ENST00000637239	ZNHIT6	Q9NWK9	470 aa	Known RBP	7.72	□□□□□ -1.17
TCF4-285	ENST00000637239	ERLIN2	O94905	339 aa		7.72	□□□□□ -1.17
TCF4-285	ENST00000637239	BMS1	Q14692	1282 aa	Known RBP	7.72	□□□□□ -1.17
TCF4-285	ENST00000637239	TPTE2	Q6XPS3	522 aa		7.72	□□□□□ -1.17
TCF4-285	ENST00000637239	TTC21A	Q8NDW8	1320 aa		7.72	□□□□□ -1.17
TCF4-285	ENST00000637239	MINDY4B	A8MYZ0	360 aa		7.72	□□□□□ -1.17
TCF4-285	ENST00000637239	FCHSD2	O94868	740 aa		7.72	□□□□□ -1.17
TCF4-285	ENST00000637239	IQCA1	Q86XH1	822 aa		7.72	□□□□□ -1.17
TCF4-285	ENST00000637239	PDE4B	Q07343	736 aa		7.71	□□□□□ -1.17
TCF4-285	ENST00000637239	MTERF4	Q7Z6M4	381 aa	Known RBP	7.71	□□□□□ -1.17
TCF4-285	ENST00000637239	FAM43A	Q8N2R8	423 aa		7.71	□□□□□ -1.17
TCF4-285	ENST00000637239	USHBP1	Q8N6Y0	703 aa		7.71	□□□□□ -1.17
TCF4-285	ENST00000637239	ACBD3	Q9H3P7	528 aa		7.71	□□□□□ -1.17
TCF4-285	ENST00000637239	CT47B1	P0C2W7	299 aa	Predicted RBP	7.71	□□□□□ -1.17
TCF4-285	ENST00000637239	CHRNA2	Q15822	529 aa		7.71	□□□□□ -1.17
TCF4-285	ENST00000637239	TAF12	Q16514	161 aa		7.71	□□□□□ -1.17
TCF4-285	ENST00000637239	UTP14A	Q9BVJ6	771 aa	Known RBP	7.71	□□□□□ -1.17
TCF4-285	ENST00000637239	RBM27	Q9P2N5	1060 aa	Known RBP	7.71	□□□□□ -1.17
TCF4-285	ENST00000637239	RPRD2	Q5VT52	1461 aa	Known RBP	7.71	□□□□□ -1.17
TCF4-285	ENST00000637239	GPT	P24298	496 aa		7.71	□□□□□ -1.18
TCF4-285	ENST00000637239	ARGLU1	Q9NWB6	273 aa	Predicted RBP	7.71	□□□□□ -1.18
TCF4-285	ENST00000637239	BRPF1	P55201	1214 aa	Predicted RBP	7.71	□□□□□ -1.18
TCF4-285	ENST00000637239	NAPB	Q9H115	298 aa		7.71	□□□□□ -1.18
TCF4-285	ENST00000637239	ZFYVE16	Q7Z3T8	1539 aa		7.71	□□□□□ -1.18
TCF4-285	ENST00000637239	ZBTB24	O43167	697 aa	Predicted RBP	7.71	□□□□□ -1.18
TCF4-285	ENST00000637239	LRRC45	Q96CN5	670 aa		7.71	□□□□□ -1.18
TCF4-285	ENST00000637239	NOD1	Q9Y239	953 aa		7.71	□□□□□ -1.18
TCF4-285	ENST00000637239	CETN2	P41208	172 aa		7.71	□□□□□ -1.18
TCF4-285	ENST00000637239	CRNKL1	Q9BZJ0	848 aa	Known RBP	7.71	□□□□□ -1.18
TCF4-285	ENST00000637239	ZC3H12C	Q9C0D7	883 aa	Known RBP	7.71	□□□□□ -1.18
TCF4-285	ENST00000637239	SEPT11	Q9NVA2	429 aa	Known RBP	7.71	□□□□□ -1.18
TCF4-285	ENST00000637239	ZMYM3	Q14202	1370 aa		7.7	□□□□□ -1.18
TCF4-285	ENST00000637239	PTPN23	Q9H3S7	1636 aa		7.7	□□□□□ -1.18
TCF4-285	ENST00000637239	KRT32	Q14532	448 aa		7.7	□□□□□ -1.18
TCF4-285	ENST00000637239	MVP	Q14764	893 aa	Known RBP	7.7	□□□□□ -1.18
TCF4-285	ENST00000637239	SLC12A5	Q9H2X9	1139 aa		7.7	□□□□□ -1.18
TCF4-285	ENST00000637239	CHD1	O14646	1710 aa		7.7	□□□□□ -1.18
TCF4-285	ENST00000637239	CCDC196	A0A1B0GTZ2	297 aa		7.7	□□□□□ -1.18
TCF4-285	ENST00000637239	MAPKBP1	O60336	1514 aa		7.7	□□□□□ -1.18
TCF4-285	ENST00000637239	IDI1	Q13907	227 aa		7.7	□□□□□ -1.18
TCF4-285	ENST00000637239	OTUD7B	Q6GQQ9	843 aa		7.7	□□□□□ -1.18
TCF4-285	ENST00000637239	STXBP4	Q6ZWJ1	553 aa		7.7	□□□□□ -1.18
TCF4-285	ENST00000637239	CTCFL	Q8NI51	663 aa	Predicted RBP	7.7	□□□□□ -1.18
TCF4-285	ENST00000637239	HSP90B2P	Q58FF3	399 aa		7.7	□□□□□ -1.18
TCF4-285	ENST00000637239	GCC1	Q96CN9	775 aa		7.7	□□□□□ -1.18
TCF4-285	ENST00000637239	TSG101	Q99816	390 aa		7.7	□□□□□ -1.18
TCF4-285	ENST00000637239	NCOA1	Q15788	1441 aa		7.7	□□□□□ -1.18
TCF4-285	ENST00000637239	RIMS2	Q9UQ26	1411 aa		7.7	□□□□□ -1.18
TCF4-285	ENST00000637239	SNRPA1	P09661	255 aa	Known RBP	7.7	□□□□□ -1.18
TCF4-285	ENST00000637239	STK38	Q15208	465 aa		7.7	□□□□□ -1.18
TCF4-285	ENST00000637239	SLC5A4	Q9NY91	659 aa		7.7	□□□□□ -1.18
TCF4-285	ENST00000637239	NASP	P49321	788 aa	Predicted RBP	7.7	□□□□□ -1.18
TCF4-285	ENST00000637239	CEBPZ	Q03701	1054 aa	Known RBP	7.7	□□□□□ -1.18
TCF4-285	ENST00000637239	NOM1	Q5C9Z4	860 aa	Known RBP	7.7	□□□□□ -1.18
TCF4-285	ENST00000637239	CCDC117	Q8IWD4	279 aa	Predicted RBP	7.7	□□□□□ -1.18
TCF4-285	ENST00000637239	CCNL1	Q9UK58	526 aa	Predicted RBP	7.7	□□□□□ -1.18
TCF4-285	ENST00000637239	CYP46A1	Q9Y6A2	500 aa		7.7	□□□□□ -1.18
TCF4-285	ENST00000637239	RAB11FIP3	O75154	756 aa		7.69	□□□□□ -1.18
TCF4-285	ENST00000637239	CEP57L1	Q8IYX8	460 aa		7.69	□□□□□ -1.18
TCF4-285	ENST00000637239	GPHN	Q9NQX3	736 aa	Predicted RBP	7.69	□□□□□ -1.18
TCF4-285	ENST00000637239	NSD3	Q9BZ95	1437 aa		7.69	□□□□□ -1.18
TCF4-285	ENST00000637239	SRGAP3	O43295	1099 aa		7.69	□□□□□ -1.18
TCF4-285	ENST00000637239	EPB41L2	O43491	1005 aa	Known RBP	7.69	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 61 ms