RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 NFIXQ14938 502 aa25.21■■□□□ 1.63
CLN6-212ENST00000636020 PLEKHO1Q53GL0 409 aaPredicted RBP25.21■■□□□ 1.63
CLN6-212ENST00000636020 CNTNAP1P78357 1384 aa25.2■■□□□ 1.63
CLN6-212ENST00000636020 CTCFP49711 727 aaPredicted RBP25.2■■□□□ 1.62
CLN6-212ENST00000636020 ZNF530Q6P9A1 599 aaPredicted RBP25.2■■□□□ 1.62
CLN6-212ENST00000636020 AFDNP55196 1824 aaKnown RBP25.2■■□□□ 1.62
CLN6-212ENST00000636020 DLEC1Q9Y238 1755 aa25.19■■□□□ 1.62
CLN6-212ENST00000636020 CDCA8Q53HL2 280 aa25.19■■□□□ 1.62
CLN6-212ENST00000636020 NFATC2IPQ8NCF5 419 aa25.19■■□□□ 1.62
CLN6-212ENST00000636020 TJP1Q07157 1748 aa25.19■■□□□ 1.62
CLN6-212ENST00000636020 NRXN2Q9P2S2 1712 aa25.18■■□□□ 1.62
CLN6-212ENST00000636020 MTHFSP49914 203 aa25.18■■□□□ 1.62
CLN6-212ENST00000636020 C2CD5Q86YS7 1000 aa25.18■■□□□ 1.62
CLN6-212ENST00000636020 SOS1Q07889 1333 aaPredicted RBP25.17■■□□□ 1.62
CLN6-212ENST00000636020 SERPINB2P05120 415 aa25.17■■□□□ 1.62
CLN6-212ENST00000636020 POTEIP0CG38 1075 aa25.17■■□□□ 1.62
CLN6-212ENST00000636020 POTEJP0CG39 1038 aa25.17■■□□□ 1.62
CLN6-212ENST00000636020 AMOTQ4VCS5 1084 aa25.17■■□□□ 1.62
CLN6-212ENST00000636020 AIDAQ96BJ3 306 aa25.16■■□□□ 1.62
CLN6-212ENST00000636020 H0YIN7 160 aa25.15■■□□□ 1.62
CLN6-212ENST00000636020 ERFEQ4G0M1 354 aa25.15■■□□□ 1.62
CLN6-212ENST00000636020 NARFQ9UHQ1 456 aa25.15■■□□□ 1.62
CLN6-212ENST00000636020 FAM161AQ3B820 660 aa25.14■■□□□ 1.62
CLN6-212ENST00000636020 DNAJC10Q8IXB1 793 aa25.14■■□□□ 1.62
CLN6-212ENST00000636020 BCL2L12Q9HB09 334 aa25.14■■□□□ 1.62
CLN6-212ENST00000636020 PASKQ96RG2 1323 aa25.13■■□□□ 1.61
CLN6-212ENST00000636020 VEGFBP49765 207 aa25.13■■□□□ 1.61
CLN6-212ENST00000636020 WBP1LQ9NX94 342 aa25.13■■□□□ 1.61
CLN6-212ENST00000636020 DICER1Q9UPY3 1922 aaKnown RBP25.12■■□□□ 1.61
CLN6-212ENST00000636020 LBX1P52954 281 aa25.12■■□□□ 1.61
CLN6-212ENST00000636020 PCDH10Q9P2E7 1040 aa25.12■■□□□ 1.61
CLN6-212ENST00000636020 CARMIL3Q8ND23 1372 aa25.11■■□□□ 1.61
CLN6-212ENST00000636020 DDNO94850 711 aaPredicted RBP25.11■■□□□ 1.61
CLN6-212ENST00000636020 C1orf141Q5JVX7 400 aa25.11■■□□□ 1.61
CLN6-212ENST00000636020 ABHD8Q96I13 439 aa25.11■■□□□ 1.61
CLN6-212ENST00000636020 CYP19A1P11511 503 aaPredicted RBP25.1■■□□□ 1.61
CLN6-212ENST00000636020 C21orf2O43822 256 aa25.09■■□□□ 1.61
CLN6-212ENST00000636020 COL15A1P39059 1388 aa25.08■■□□□ 1.61
CLN6-212ENST00000636020 TNNT2P45379 298 aaPredicted RBP25.08■■□□□ 1.61
CLN6-212ENST00000636020 FER1L6Q2WGJ9 1857 aa25.07■■□□□ 1.6
CLN6-212ENST00000636020 TMEM88BA6NKF7 163 aa25.07■■□□□ 1.6
CLN6-212ENST00000636020 LDHDQ86WU2 507 aa25.07■■□□□ 1.6
CLN6-212ENST00000636020 LTBP3Q9NS15 1303 aa25.07■■□□□ 1.6
CLN6-212ENST00000636020 ZNF622Q969S3 477 aaKnown RBP eCLIP25.06■■□□□ 1.6
CLN6-212ENST00000636020 ZNF219Q9P2Y4 722 aaPredicted RBP25.06■■□□□ 1.6
CLN6-212ENST00000636020 VIRMAQ69YN4 1812 aaKnown RBP25.05■■□□□ 1.6
CLN6-212ENST00000636020 ITGBL1O95965 494 aaPredicted RBP25.05■■□□□ 1.6
CLN6-212ENST00000636020 HSPA8P11142 646 aaKnown RBP25.05■■□□□ 1.6
CLN6-212ENST00000636020 AEBP1Q8IUX7 1158 aa25.05■■□□□ 1.6
CLN6-212ENST00000636020 ZBTB1Q9Y2K1 713 aa25.05■■□□□ 1.6
CLN6-212ENST00000636020 PDZRN3Q9UPQ7 1066 aa25.04■■□□□ 1.6
CLN6-212ENST00000636020 IQCA1LA6NCM1 817 aa25.03■■□□□ 1.6
CLN6-212ENST00000636020 TAOK3Q9H2K8 898 aa25.03■■□□□ 1.6
CLN6-212ENST00000636020 TAF1DQ9H5J8 278 aaPredicted RBP25.03■■□□□ 1.6
CLN6-212ENST00000636020 BICDL1Q6ZP65 573 aa25.02■■□□□ 1.6
CLN6-212ENST00000636020 L3MBTL3Q96JM7 780 aaPredicted RBP25.02■■□□□ 1.6
CLN6-212ENST00000636020 BRIP1Q9BX63 1249 aa25.02■■□□□ 1.6
CLN6-212ENST00000636020 SCN11AQ9UI33 1791 aa25.01■■□□□ 1.59
CLN6-212ENST00000636020 PDE6BP35913 854 aa25.01■■□□□ 1.59
CLN6-212ENST00000636020 SLC52A2Q9HAB3 445 aa25.01■■□□□ 1.59
CLN6-212ENST00000636020 ANKRD31Q8N7Z5 1873 aa25■■□□□ 1.59
CLN6-212ENST00000636020 RGS19P49795 217 aa25■■□□□ 1.59
CLN6-212ENST00000636020 MLLT1Q03111 559 aaPredicted RBP25■■□□□ 1.59
CLN6-212ENST00000636020 RASSF10A6NK89 507 aa24.99■■□□□ 1.59
CLN6-212ENST00000636020 SLC39A6Q13433 755 aa24.99■■□□□ 1.59
CLN6-212ENST00000636020 SCN4AP35499 1836 aa24.98■■□□□ 1.59
CLN6-212ENST00000636020 MAP2K1Q02750 393 aaPredicted RBP24.97■■□□□ 1.59
CLN6-212ENST00000636020 DEFB115Q30KQ5 88 aa24.97■■□□□ 1.59
CLN6-212ENST00000636020 TBC1D9BQ66K14 1250 aa24.97■■□□□ 1.59
CLN6-212ENST00000636020 LGR6Q9HBX8 967 aa24.97■■□□□ 1.59
CLN6-212ENST00000636020 COL11A2P13942 1736 aaPredicted RBP24.96■■□□□ 1.59
CLN6-212ENST00000636020 CANXP27824 592 aaKnown RBP24.96■■□□□ 1.59
CLN6-212ENST00000636020 EIF5P55010 431 aaKnown RBP24.96■■□□□ 1.59
CLN6-212ENST00000636020 AKAP4Q5JQC9 854 aa24.96■■□□□ 1.59
CLN6-212ENST00000636020 SULT6B1Q6IMI4 303 aa24.96■■□□□ 1.59
CLN6-212ENST00000636020 PRR5LQ6MZQ0 368 aa24.96■■□□□ 1.59
CLN6-212ENST00000636020 CCDC24Q8N4L8 307 aa24.96■■□□□ 1.59
CLN6-212ENST00000636020 VSIG10Q8N0Z9 540 aa24.95■■□□□ 1.58
CLN6-212ENST00000636020 SLX4Q8IY92 1834 aa24.94■■□□□ 1.58
CLN6-212ENST00000636020 CCDC85CA6NKD9 419 aa24.94■■□□□ 1.58
CLN6-212ENST00000636020 EAPPQ56P03 285 aaPredicted RBP24.94■■□□□ 1.58
CLN6-212ENST00000636020 CNKSR1Q969H4 720 aa24.94■■□□□ 1.58
CLN6-212ENST00000636020 WDR33Q9C0J8 1336 aaKnown RBP24.93■■□□□ 1.58
CLN6-212ENST00000636020 SOGA3Q5TF21 947 aa24.93■■□□□ 1.58
CLN6-212ENST00000636020 PRPF40BQ6NWY9 871 aaKnown RBP24.93■■□□□ 1.58
CLN6-212ENST00000636020 MRC1P22897 1456 aa24.92■■□□□ 1.58
CLN6-212ENST00000636020 A0A087WZG4 1122 aa24.92■■□□□ 1.58
CLN6-212ENST00000636020 RNMTO43148 476 aaKnown RBP24.92■■□□□ 1.58
CLN6-212ENST00000636020 STYK1Q6J9G0 422 aa24.92■■□□□ 1.58
CLN6-212ENST00000636020 CLEC11AQ9Y240 323 aa24.92■■□□□ 1.58
CLN6-212ENST00000636020 SRGNP10124 158 aa24.91■■□□□ 1.58
CLN6-212ENST00000636020 HACL1Q9UJ83 578 aa24.91■■□□□ 1.58
CLN6-212ENST00000636020 CNTROBQ8N137 903 aa24.9■■□□□ 1.58
CLN6-212ENST00000636020 ADAMTSL1Q8N6G6 1762 aa24.9■■□□□ 1.58
CLN6-212ENST00000636020 C7orf43Q8WVR3 580 aa24.89■■□□□ 1.58
CLN6-212ENST00000636020 ZNF541Q9H0D2 1346 aa24.88■■□□□ 1.57
CLN6-212ENST00000636020 STARD3NLO95772 234 aa24.88■■□□□ 1.57
CLN6-212ENST00000636020 EPHX2P34913 555 aa24.88■■□□□ 1.57
CLN6-212ENST00000636020 MASTLQ96GX5 879 aa24.88■■□□□ 1.57
CLN6-212ENST00000636020 MAP1SQ66K74 1059 aaPredicted RBP24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms