RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 UBR2Q8IWV8 1755 aa21.93■■□□□ 1.1
LINC00628-201ENST00000628516 ZNF496Q96IT1 587 aaPredicted RBP21.93■■□□□ 1.1
LINC00628-201ENST00000628516 BCS1LQ9Y276 419 aa21.93■■□□□ 1.1
LINC00628-201ENST00000628516 N4BP2Q86UW6 1770 aaPredicted RBP21.92■■□□□ 1.1
LINC00628-201ENST00000628516 CEMIPQ8WUJ3 1361 aa21.92■■□□□ 1.1
LINC00628-201ENST00000628516 NARFQ9UHQ1 456 aa21.92■■□□□ 1.1
LINC00628-201ENST00000628516 HEG1Q9ULI3 1381 aa21.91■■□□□ 1.1
LINC00628-201ENST00000628516 BTBD11A6QL63 1104 aa21.91■■□□□ 1.1
LINC00628-201ENST00000628516 GIGYF1O75420 1035 aaPredicted RBP21.91■■□□□ 1.1
LINC00628-201ENST00000628516 TM4SF1P30408 202 aa21.91■■□□□ 1.1
LINC00628-201ENST00000628516 KIAA1551Q9HCM1 1747 aa21.91■■□□□ 1.1
LINC00628-201ENST00000628516 ATP10DQ9P241 1426 aa21.9■■□□□ 1.1
LINC00628-201ENST00000628516 POLRMTO00411 1230 aaKnown RBP21.9■■□□□ 1.1
LINC00628-201ENST00000628516 C1QTNF8P60827 252 aa21.9■■□□□ 1.1
LINC00628-201ENST00000628516 RTF1Q92541 710 aaKnown RBP21.9■■□□□ 1.1
LINC00628-201ENST00000628516 FMNL2Q96PY5 1086 aa21.9■■□□□ 1.1
LINC00628-201ENST00000628516 TEX13AQ9BXU3 409 aaPredicted RBP21.9■■□□□ 1.1
LINC00628-201ENST00000628516 SIPA1L3O60292 1781 aaPredicted RBP21.89■■□□□ 1.1
LINC00628-201ENST00000628516 SENP3-EIF4A1A0A087X0R7 540 aa21.89■■□□□ 1.09
LINC00628-201ENST00000628516 KCNQ3O43525 872 aa21.88■■□□□ 1.09
LINC00628-201ENST00000628516 EIF5P55010 431 aaKnown RBP21.87■■□□□ 1.09
LINC00628-201ENST00000628516 NFIXQ14938 502 aa21.87■■□□□ 1.09
LINC00628-201ENST00000628516 MCM10Q7L590 875 aa21.87■■□□□ 1.09
LINC00628-201ENST00000628516 BCL2L12Q9HB09 334 aa21.87■■□□□ 1.09
LINC00628-201ENST00000628516 A0A087WZG4 1122 aa21.86■■□□□ 1.09
LINC00628-201ENST00000628516 KCNA3P22001 575 aa21.86■■□□□ 1.09
LINC00628-201ENST00000628516 ZNF330Q9Y3S2 320 aaPredicted RBP21.86■■□□□ 1.09
LINC00628-201ENST00000628516 ADCY9O60503 1353 aa21.86■■□□□ 1.09
LINC00628-201ENST00000628516 DCTN1Q14203 1278 aa21.85■■□□□ 1.09
LINC00628-201ENST00000628516 ARHGAP27Q6ZUM4 889 aa21.85■■□□□ 1.09
LINC00628-201ENST00000628516 ZNF526Q8TF50 670 aaPredicted RBP21.85■■□□□ 1.09
LINC00628-201ENST00000628516 GPBP1L1Q9HC44 474 aaPredicted RBP21.85■■□□□ 1.09
LINC00628-201ENST00000628516 PIM2Q9P1W9 311 aa21.85■■□□□ 1.09
LINC00628-201ENST00000628516 NEFMP07197 916 aa21.84■■□□□ 1.09
LINC00628-201ENST00000628516 HTATSF1O43719 755 aaKnown RBP21.83■■□□□ 1.09
LINC00628-201ENST00000628516 A1BGP04217 495 aa21.83■■□□□ 1.09
LINC00628-201ENST00000628516 CHRNA5P30532 468 aa21.83■■□□□ 1.09
LINC00628-201ENST00000628516 NPM2Q86SE8 214 aaKnown RBP21.83■■□□□ 1.09
LINC00628-201ENST00000628516 SERPINB2P05120 415 aa21.82■■□□□ 1.08
LINC00628-201ENST00000628516 IL6STP40189 918 aaPredicted RBP21.82■■□□□ 1.08
LINC00628-201ENST00000628516 DALRD3Q5D0E6 543 aaKnown RBP21.82■■□□□ 1.08
LINC00628-201ENST00000628516 BICDL1Q6ZP65 573 aa21.82■■□□□ 1.08
LINC00628-201ENST00000628516 BRCA1P38398 1863 aaKnown RBP21.81■■□□□ 1.08
LINC00628-201ENST00000628516 TBC1D2BQ9UPU7 963 aa21.81■■□□□ 1.08
LINC00628-201ENST00000628516 USP16Q9Y5T5 823 aa21.8■■□□□ 1.08
LINC00628-201ENST00000628516 AFDNP55196 1824 aaKnown RBP21.79■■□□□ 1.08
LINC00628-201ENST00000628516 PRAMEF22A3QJZ6 481 aa21.79■■□□□ 1.08
LINC00628-201ENST00000628516 SNRPA1P09661 255 aaKnown RBP21.78■■□□□ 1.08
LINC00628-201ENST00000628516 TAF7Q15545 349 aaPredicted RBP21.78■■□□□ 1.08
LINC00628-201ENST00000628516 TBC1D9BQ66K14 1250 aa21.78■■□□□ 1.08
LINC00628-201ENST00000628516 PIP4K2AP48426 406 aaPredicted RBP21.77■■□□□ 1.08
LINC00628-201ENST00000628516 PLEKHF1Q96S99 279 aa21.77■■□□□ 1.08
LINC00628-201ENST00000628516 NRXN2Q9P2S2 1712 aa21.77■■□□□ 1.08
LINC00628-201ENST00000628516 DDX10Q13206 875 aaKnown RBP21.76■■□□□ 1.07
LINC00628-201ENST00000628516 RALBP1Q15311 655 aa21.76■■□□□ 1.07
LINC00628-201ENST00000628516 PNNQ9H307 717 aaKnown RBP21.76■■□□□ 1.07
LINC00628-201ENST00000628516 MIS18AQ9NYP9 233 aa21.76■■□□□ 1.07
LINC00628-201ENST00000628516 ARFGEF1Q9Y6D6 1849 aa21.76■■□□□ 1.07
LINC00628-201ENST00000628516 ZNF316A6NFI3 1004 aaPredicted RBP21.75■■□□□ 1.07
LINC00628-201ENST00000628516 DZIP3Q86Y13 1208 aaKnown RBP21.75■■□□□ 1.07
LINC00628-201ENST00000628516 MAPK8IP3Q9UPT6 1336 aa21.75■■□□□ 1.07
LINC00628-201ENST00000628516 CAMTA2O94983 1202 aa21.74■■□□□ 1.07
LINC00628-201ENST00000628516 NFE2L2Q16236 605 aa21.74■■□□□ 1.07
LINC00628-201ENST00000628516 C2CD5Q86YS7 1000 aa21.74■■□□□ 1.07
LINC00628-201ENST00000628516 SCN7AQ01118 1682 aa21.74■■□□□ 1.07
LINC00628-201ENST00000628516 CARMIL3Q8ND23 1372 aa21.74■■□□□ 1.07
LINC00628-201ENST00000628516 CEP350Q5VT06 3117 aa21.73■■□□□ 1.07
LINC00628-201ENST00000628516 C9orf131Q5VYM1 1079 aa21.73■■□□□ 1.07
LINC00628-201ENST00000628516 H0YIN7 160 aa21.72■■□□□ 1.07
LINC00628-201ENST00000628516 SETDB2Q96T68 719 aa21.72■■□□□ 1.07
LINC00628-201ENST00000628516 DLG5Q8TDM6 1919 aa21.71■■□□□ 1.07
LINC00628-201ENST00000628516 CCDC24Q8N4L8 307 aa21.71■■□□□ 1.07
LINC00628-201ENST00000628516 TTLL6Q8N841 843 aa21.71■■□□□ 1.07
LINC00628-201ENST00000628516 PNISRQ8TF01 805 aaKnown RBP21.71■■□□□ 1.07
LINC00628-201ENST00000628516 NPHP1O15259 732 aa21.7■■□□□ 1.06
LINC00628-201ENST00000628516 PRR5LQ6MZQ0 368 aa21.7■■□□□ 1.06
LINC00628-201ENST00000628516 THUMPD2Q9BTF0 503 aaKnown RBP21.7■■□□□ 1.06
LINC00628-201ENST00000628516 NBPF26B4DH59 902 aa21.69■■□□□ 1.06
LINC00628-201ENST00000628516 NBPF10Q6P3W6 841 aaKnown RBP21.69■■□□□ 1.06
LINC00628-201ENST00000628516 NBPF15Q8N660 670 aa21.69■■□□□ 1.06
LINC00628-201ENST00000628516 BRIP1Q9BX63 1249 aa21.69■■□□□ 1.06
LINC00628-201ENST00000628516 RNF181Q9P0P0 153 aa21.69■■□□□ 1.06
LINC00628-201ENST00000628516 KIF3CO14782 793 aa21.68■■□□□ 1.06
LINC00628-201ENST00000628516 PDE6BP35913 854 aa21.68■■□□□ 1.06
LINC00628-201ENST00000628516 CNBD1Q8NA66 436 aa21.68■■□□□ 1.06
LINC00628-201ENST00000628516 CLEC4GQ6UXB4 293 aa21.67■■□□□ 1.06
LINC00628-201ENST00000628516 ZNF622Q969S3 477 aaKnown RBP eCLIP21.67■■□□□ 1.06
LINC00628-201ENST00000628516 PDZRN3Q9UPQ7 1066 aa21.67■■□□□ 1.06
LINC00628-201ENST00000628516 ZNF652Q9Y2D9 606 aa21.67■■□□□ 1.06
LINC00628-201ENST00000628516 BCORQ6W2J9 1755 aa21.66■■□□□ 1.06
LINC00628-201ENST00000628516 MYBBP1AQ9BQG0 1328 aaKnown RBP21.66■■□□□ 1.06
LINC00628-201ENST00000628516 EIF4A1P60842 406 aaKnown RBP21.66■■□□□ 1.06
LINC00628-201ENST00000628516 ST5P78524 1137 aa21.66■■□□□ 1.06
LINC00628-201ENST00000628516 RASSF7Q02833 373 aa21.66■■□□□ 1.06
LINC00628-201ENST00000628516 DLEC1Q9Y238 1755 aa21.66■■□□□ 1.06
LINC00628-201ENST00000628516 RIPK4P57078 832 aa21.65■■□□□ 1.06
LINC00628-201ENST00000628516 NBPF5PQ86XG9 351 aaPredicted RBP21.64■■□□□ 1.05
LINC00628-201ENST00000628516 ANKRD31Q8N7Z5 1873 aa21.64■■□□□ 1.05
LINC00628-201ENST00000628516 KDM3BQ7LBC6 1761 aa21.64■■□□□ 1.05
LINC00628-201ENST00000628516 NGEFQ8N5V2 710 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms