RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 FAM193AP78312 1265 aa14.93□□□□□ -0.02
SCN8A-209ENST00000627620 IDI1Q13907 227 aa14.93□□□□□ -0.02
SCN8A-209ENST00000627620 TNIP1Q15025 636 aa14.93□□□□□ -0.02
SCN8A-209ENST00000627620 ZNF444Q8N0Y2 327 aaPredicted RBP14.93□□□□□ -0.02
SCN8A-209ENST00000627620 PTPRCP08575 1304 aa14.93□□□□□ -0.02
SCN8A-209ENST00000627620 TRIM27P14373 513 aa14.92□□□□□ -0.02
SCN8A-209ENST00000627620 ENOX2Q16206 610 aaKnown RBP14.92□□□□□ -0.02
SCN8A-209ENST00000627620 TAX1BP1Q86VP1 789 aa14.92□□□□□ -0.02
SCN8A-209ENST00000627620 ANO10Q9NW15 660 aa14.92□□□□□ -0.02
SCN8A-209ENST00000627620 ESPNB1AK53 854 aa14.92□□□□□ -0.02
SCN8A-209ENST00000627620 KLHL10Q6JEL2 608 aa14.92□□□□□ -0.02
SCN8A-209ENST00000627620 ZBTB3Q9H5J0 574 aa14.92□□□□□ -0.02
SCN8A-209ENST00000627620 DESP17661 470 aa14.92□□□□□ -0.02
SCN8A-209ENST00000627620 PLB1Q6P1J6 1458 aa14.92□□□□□ -0.02
SCN8A-209ENST00000627620 PCF11O94913 1555 aaKnown RBP14.92□□□□□ -0.02
SCN8A-209ENST00000627620 GPTP24298 496 aa14.91□□□□□ -0.02
SCN8A-209ENST00000627620 SSR1P43307 286 aaKnown RBP14.91□□□□□ -0.02
SCN8A-209ENST00000627620 LIMCH1Q9UPQ0 1083 aa14.91□□□□□ -0.02
SCN8A-209ENST00000627620 FAM135AQ9P2D6 1515 aa14.91□□□□□ -0.02
SCN8A-209ENST00000627620 CCDC183Q5T5S1 534 aa14.91□□□□□ -0.02
SCN8A-209ENST00000627620 RNF41Q9H4P4 317 aaPredicted RBP14.91□□□□□ -0.02
SCN8A-209ENST00000627620 PHAXQ9H814 394 aaKnown RBP14.91□□□□□ -0.02
SCN8A-209ENST00000627620 MAP3K2Q9Y2U5 619 aa14.91□□□□□ -0.02
SCN8A-209ENST00000627620 PTPN23Q9H3S7 1636 aa14.91□□□□□ -0.02
SCN8A-209ENST00000627620 SFPQP23246 707 aaKnown RBP eCLIP14.91□□□□□ -0.02
SCN8A-209ENST00000627620 CCDC96Q2M329 555 aa14.9□□□□□ -0.02
SCN8A-209ENST00000627620 LRPPRCP42704 1394 aaKnown RBP14.9□□□□□ -0.02
SCN8A-209ENST00000627620 TTC21BQ7Z4L5 1316 aa14.9□□□□□ -0.02
SCN8A-209ENST00000627620 IFIT3O14879 490 aaKnown RBP14.9□□□□□ -0.02
SCN8A-209ENST00000627620 JAKMIP3Q5VZ66 844 aa14.9□□□□□ -0.02
SCN8A-209ENST00000627620 RPGRQ92834 1020 aaKnown RBP14.9□□□□□ -0.02
SCN8A-209ENST00000627620 KIAA0754O94854 1291 aa14.9□□□□□ -0.02
SCN8A-209ENST00000627620 SSRP1Q08945 709 aaKnown RBP14.9□□□□□ -0.02
SCN8A-209ENST00000627620 EVI5LQ96CN4 794 aa14.9□□□□□ -0.02
SCN8A-209ENST00000627620 PLEKHH1Q9ULM0 1364 aa14.9□□□□□ -0.02
SCN8A-209ENST00000627620 GOLGA8AA7E2F4 631 aa14.9□□□□□ -0.02
SCN8A-209ENST00000627620 GOLGA8BA8MQT2 603 aa14.9□□□□□ -0.02
SCN8A-209ENST00000627620 CEBPAP49715 358 aaPredicted RBP14.9□□□□□ -0.02
SCN8A-209ENST00000627620 KIF14Q15058 1648 aa14.9□□□□□ -0.02
SCN8A-209ENST00000627620 EXOC5O00471 708 aa14.9□□□□□ -0.02
SCN8A-209ENST00000627620 CCDC148Q8NFR7 591 aa14.9□□□□□ -0.02
SCN8A-209ENST00000627620 FKBP15Q5T1M5 1219 aa14.89□□□□□ -0.03
SCN8A-209ENST00000627620 TSG101Q99816 390 aa14.89□□□□□ -0.03
SCN8A-209ENST00000627620 ECHDC1Q9NTX5 307 aa14.89□□□□□ -0.03
SCN8A-209ENST00000627620 SPA17Q15506 151 aa14.89□□□□□ -0.03
SCN8A-209ENST00000627620 POTEJP0CG39 1038 aa14.89□□□□□ -0.03
SCN8A-209ENST00000627620 IBSPP21815 317 aaPredicted RBP14.89□□□□□ -0.03
SCN8A-209ENST00000627620 CCT2P78371 535 aaKnown RBP14.89□□□□□ -0.03
SCN8A-209ENST00000627620 ABCA10Q8WWZ4 1543 aa14.89□□□□□ -0.03
SCN8A-209ENST00000627620 KRT28Q7Z3Y7 464 aa14.88□□□□□ -0.03
SCN8A-209ENST00000627620 UBXN4Q92575 508 aa14.88□□□□□ -0.03
SCN8A-209ENST00000627620 NOS1P29475 1434 aa14.88□□□□□ -0.03
SCN8A-209ENST00000627620 RAB34Q9BZG1 259 aa14.88□□□□□ -0.03
SCN8A-209ENST00000627620 CCDC194A0A1B0GVG4 234 aa14.88□□□□□ -0.03
SCN8A-209ENST00000627620 IFNL2Q8IZJ0 200 aa14.88□□□□□ -0.03
SCN8A-209ENST00000627620 LARP6Q9BRS8 491 aaKnown RBP14.88□□□□□ -0.03
SCN8A-209ENST00000627620 UBA5Q9GZZ9 404 aa14.88□□□□□ -0.03
SCN8A-209ENST00000627620 GOLIM4O00461 696 aa14.88□□□□□ -0.03
SCN8A-209ENST00000627620 NEBLO76041 1014 aa14.88□□□□□ -0.03
SCN8A-209ENST00000627620 SSFA2P28290 1259 aa14.88□□□□□ -0.03
SCN8A-209ENST00000627620 NLRP5P59047 1200 aa14.88□□□□□ -0.03
SCN8A-209ENST00000627620 CCDC102AQ96A19 550 aa14.88□□□□□ -0.03
SCN8A-209ENST00000627620 SLF2Q8IX21 1173 aa14.88□□□□□ -0.03
SCN8A-209ENST00000627620 TMEM266Q2M3C6 531 aa14.87□□□□□ -0.03
SCN8A-209ENST00000627620 CATIPQ7Z7H3 387 aa14.87□□□□□ -0.03
SCN8A-209ENST00000627620 SCAF11Q99590 1463 aaKnown RBP14.87□□□□□ -0.03
SCN8A-209ENST00000627620 ATP5J2-PTCD1G3V325 749 aa14.87□□□□□ -0.03
SCN8A-209ENST00000627620 MBIPQ9NS73 344 aa14.87□□□□□ -0.03
SCN8A-209ENST00000627620 NSD2O96028 1365 aa14.87□□□□□ -0.03
SCN8A-209ENST00000627620 CACNA2D4Q7Z3S7 1137 aa14.87□□□□□ -0.03
SCN8A-209ENST00000627620 ZSCAN30Q86W11 494 aa14.87□□□□□ -0.03
SCN8A-209ENST00000627620 CUL5Q93034 780 aa14.87□□□□□ -0.03
SCN8A-209ENST00000627620 ZSCAN12O43309 604 aa14.87□□□□□ -0.03
SCN8A-209ENST00000627620 LDHAL6AQ6ZMR3 332 aa14.87□□□□□ -0.03
SCN8A-209ENST00000627620 CWC25Q9NXE8 425 aaPredicted RBP14.87□□□□□ -0.03
SCN8A-209ENST00000627620 FAM83GA6ND36 823 aa14.87□□□□□ -0.03
SCN8A-209ENST00000627620 TEX13AQ9BXU3 409 aaPredicted RBP14.87□□□□□ -0.03
SCN8A-209ENST00000627620 NGLY1Q96IV0 654 aa14.86□□□□□ -0.03
SCN8A-209ENST00000627620 GOLGA6L7A0A1B0GV03 622 aa14.86□□□□□ -0.03
SCN8A-209ENST00000627620 TOP1P11387 765 aaKnown RBP14.86□□□□□ -0.03
SCN8A-209ENST00000627620 TTF1Q15361 905 aaPredicted RBP14.86□□□□□ -0.03
SCN8A-209ENST00000627620 PTPN14Q15678 1187 aa14.86□□□□□ -0.03
SCN8A-209ENST00000627620 CNNM3Q8NE01 707 aa14.86□□□□□ -0.03
SCN8A-209ENST00000627620 SCLT1Q96NL6 688 aa14.86□□□□□ -0.03
SCN8A-209ENST00000627620 NCOA1Q15788 1441 aa14.86□□□□□ -0.03
SCN8A-209ENST00000627620 C14orf93Q9H972 538 aaKnown RBP14.86□□□□□ -0.03
SCN8A-209ENST00000627620 SNRKQ9NRH2 765 aa14.86□□□□□ -0.03
SCN8A-209ENST00000627620 PI4KAP2A4QPH2 592 aa14.86□□□□□ -0.03
SCN8A-209ENST00000627620 GBP2P32456 591 aaPredicted RBP14.86□□□□□ -0.03
SCN8A-209ENST00000627620 PPP4R3AQ6IN85 833 aa14.86□□□□□ -0.03
SCN8A-209ENST00000627620 PI4KAP1Q8N8J0 262 aa14.86□□□□□ -0.03
SCN8A-209ENST00000627620 TBC1D2Q9BYX2 928 aa14.86□□□□□ -0.03
SCN8A-209ENST00000627620 KIF2AO00139 706 aaPredicted RBP14.85□□□□□ -0.03
SCN8A-209ENST00000627620 CTAGE5O15320 804 aa14.85□□□□□ -0.03
SCN8A-209ENST00000627620 TRIM21P19474 475 aaKnown RBP14.85□□□□□ -0.03
SCN8A-209ENST00000627620 CKAP2LQ8IYA6 745 aa14.85□□□□□ -0.03
SCN8A-209ENST00000627620 C6orf229H3BNL8 230 aa14.85□□□□□ -0.03
SCN8A-209ENST00000627620 CETN2P41208 172 aa14.85□□□□□ -0.03
SCN8A-209ENST00000627620 UBE3BQ7Z3V4 1068 aa14.85□□□□□ -0.03
SCN8A-209ENST00000627620 PPP1R42Q7Z4L9 355 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms