RNA–Protein interactions for RNA: ENST00000627490.2

PBX1-222, Transcript of PBX homeobox 1, humanhuman

TSL 2 BASIC

Gene PBX1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-222ENST00000627490 AKAP4Q5JQC9 854 aa24.77■■□□□ 1.56
PBX1-222ENST00000627490 STRN4Q9NRL3 753 aa24.77■■□□□ 1.56
PBX1-222ENST00000627490 NUTM2BA6NNL0 878 aaPredicted RBP24.77■■□□□ 1.56
PBX1-222ENST00000627490 NUTM2EB1AL46 878 aaPredicted RBP24.77■■□□□ 1.56
PBX1-222ENST00000627490 NUCB2P80303 420 aa24.77■■□□□ 1.56
PBX1-222ENST00000627490 NUTM2AQ8IVF1 878 aaPredicted RBP24.77■■□□□ 1.56
PBX1-222ENST00000627490 BABAM1Q9NWV8 329 aa24.77■■□□□ 1.56
PBX1-222ENST00000627490 LRP6O75581 1613 aa24.76■■□□□ 1.55
PBX1-222ENST00000627490 KRT24Q2M2I5 525 aa24.76■■□□□ 1.55
PBX1-222ENST00000627490 MEIS3Q99687 375 aa24.76■■□□□ 1.55
PBX1-222ENST00000627490 GRPEL1Q9HAV7 217 aa24.76■■□□□ 1.55
PBX1-222ENST00000627490 CWC22Q9HCG8 908 aaKnown RBP24.76■■□□□ 1.55
PBX1-222ENST00000627490 TSPYL4Q9UJ04 414 aa24.76■■□□□ 1.55
PBX1-222ENST00000627490 CACNA1FO60840 1977 aa24.76■■□□□ 1.55
PBX1-222ENST00000627490 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.76■■□□□ 1.55
PBX1-222ENST00000627490 SPG7Q9UQ90 795 aa24.75■■□□□ 1.55
PBX1-222ENST00000627490 CEMIPQ8WUJ3 1361 aa24.75■■□□□ 1.55
PBX1-222ENST00000627490 SDSP20132 328 aa24.75■■□□□ 1.55
PBX1-222ENST00000627490 ZNF530Q6P9A1 599 aaPredicted RBP24.75■■□□□ 1.55
PBX1-222ENST00000627490 RBM42Q9BTD8 480 aaKnown RBP24.74■■□□□ 1.55
PBX1-222ENST00000627490 C16orf71Q8IYS4 520 aaPredicted RBP24.73■■□□□ 1.55
PBX1-222ENST00000627490 IBTKQ9P2D0 1353 aaPredicted RBP24.73■■□□□ 1.55
PBX1-222ENST00000627490 DISP2A7MBM2 1401 aa24.73■■□□□ 1.55
PBX1-222ENST00000627490 SHANK3Q9BYB0 1731 aa24.73■■□□□ 1.55
PBX1-222ENST00000627490 ST18O60284 1047 aa24.72■■□□□ 1.55
PBX1-222ENST00000627490 IL2RBP14784 551 aa24.72■■□□□ 1.55
PBX1-222ENST00000627490 STK31Q9BXU1 1019 aa24.72■■□□□ 1.55
PBX1-222ENST00000627490 N4BP2Q86UW6 1770 aaPredicted RBP24.72■■□□□ 1.55
PBX1-222ENST00000627490 GNAI2P04899 355 aa24.72■■□□□ 1.55
PBX1-222ENST00000627490 C1orf141Q5JVX7 400 aa24.72■■□□□ 1.55
PBX1-222ENST00000627490 GNAI3P08754 354 aa24.71■■□□□ 1.55
PBX1-222ENST00000627490 SCN11AQ9UI33 1791 aa24.71■■□□□ 1.55
PBX1-222ENST00000627490 ERC2O15083 957 aa24.7■■□□□ 1.55
PBX1-222ENST00000627490 FNBP4Q8N3X1 1017 aaPredicted RBP24.7■■□□□ 1.55
PBX1-222ENST00000627490 CCDC30Q5VVM6 783 aa24.7■■□□□ 1.54
PBX1-222ENST00000627490 IL17REQ8NFR9 667 aa24.7■■□□□ 1.54
PBX1-222ENST00000627490 THRAP3Q9Y2W1 955 aaKnown RBP24.7■■□□□ 1.54
PBX1-222ENST00000627490 PXDNLA1KZ92 1463 aa24.69■■□□□ 1.54
PBX1-222ENST00000627490 SIPA1L3O60292 1781 aaPredicted RBP24.68■■□□□ 1.54
PBX1-222ENST00000627490 BCL9LQ86UU0 1499 aa24.68■■□□□ 1.54
PBX1-222ENST00000627490 OTUD7AQ8TE49 926 aaPredicted RBP24.68■■□□□ 1.54
PBX1-222ENST00000627490 ANO8Q9HCE9 1232 aaPredicted RBP24.68■■□□□ 1.54
PBX1-222ENST00000627490 BAG4O95429 457 aaKnown RBP24.67■■□□□ 1.54
PBX1-222ENST00000627490 SSFA2P28290 1259 aa24.67■■□□□ 1.54
PBX1-222ENST00000627490 KLHL40Q2TBA0 621 aa24.67■■□□□ 1.54
PBX1-222ENST00000627490 IFNL2Q8IZJ0 200 aa24.67■■□□□ 1.54
PBX1-222ENST00000627490 SPATA31A1Q5TZJ5 1347 aa24.67■■□□□ 1.54
PBX1-222ENST00000627490 PHKG2P15735 406 aa24.67■■□□□ 1.54
PBX1-222ENST00000627490 PDE1AP54750 535 aa24.67■■□□□ 1.54
PBX1-222ENST00000627490 UNC5CLQ8IV45 518 aa24.67■■□□□ 1.54
PBX1-222ENST00000627490 RRAGDQ9NQL2 400 aaPredicted RBP24.67■■□□□ 1.54
PBX1-222ENST00000627490 PCDH11XQ9BZA7 1347 aa24.66■■□□□ 1.54
PBX1-222ENST00000627490 PCDH11YQ9BZA8 1340 aa24.66■■□□□ 1.54
PBX1-222ENST00000627490 SMARCA5O60264 1052 aaPredicted RBP24.66■■□□□ 1.54
PBX1-222ENST00000627490 CYP2E1P05181 493 aaPredicted RBP24.66■■□□□ 1.54
PBX1-222ENST00000627490 CDCA7Q9BWT1 371 aaPredicted RBP24.66■■□□□ 1.54
PBX1-222ENST00000627490 ZCRB1Q8TBF4 217 aaKnown RBP24.65■■□□□ 1.54
PBX1-222ENST00000627490 PANK2Q9BZ23 570 aa24.65■■□□□ 1.54
PBX1-222ENST00000627490 MRC1P22897 1456 aa24.65■■□□□ 1.54
PBX1-222ENST00000627490 SPATA31A5Q5VU36 1347 aa24.65■■□□□ 1.54
PBX1-222ENST00000627490 SPATA31A7Q8IWB4 1347 aa24.65■■□□□ 1.54
PBX1-222ENST00000627490 RNMTO43148 476 aaKnown RBP24.65■■□□□ 1.54
PBX1-222ENST00000627490 MCM2P49736 904 aa24.65■■□□□ 1.54
PBX1-222ENST00000627490 G2E3Q7L622 706 aa24.65■■□□□ 1.54
PBX1-222ENST00000627490 SRCIN1Q9C0H9 1055 aa24.65■■□□□ 1.54
PBX1-222ENST00000627490 CLCN1P35523 988 aa24.64■■□□□ 1.53
PBX1-222ENST00000627490 ATP8B2P98198 1209 aa24.64■■□□□ 1.53
PBX1-222ENST00000627490 NGLY1Q96IV0 654 aa24.64■■□□□ 1.53
PBX1-222ENST00000627490 C8orf37Q96NL8 207 aa24.64■■□□□ 1.53
PBX1-222ENST00000627490 FOXD4L1Q9NU39 408 aa24.64■■□□□ 1.53
PBX1-222ENST00000627490 KDM3BQ7LBC6 1761 aa24.64■■□□□ 1.53
PBX1-222ENST00000627490 AOX1Q06278 1338 aa24.63■■□□□ 1.53
PBX1-222ENST00000627490 SALL3Q9BXA9 1300 aa24.63■■□□□ 1.53
PBX1-222ENST00000627490 CYP27B1O15528 508 aa24.63■■□□□ 1.53
PBX1-222ENST00000627490 EPB41L2O43491 1005 aaKnown RBP24.63■■□□□ 1.53
PBX1-222ENST00000627490 SLC4A10Q6U841 1118 aa24.63■■□□□ 1.53
PBX1-222ENST00000627490 CHMP4AQ9BY43 222 aa24.63■■□□□ 1.53
PBX1-222ENST00000627490 TUBGCP6Q96RT7 1819 aa24.63■■□□□ 1.53
PBX1-222ENST00000627490 KDM6AO15550 1401 aaPredicted RBP24.63■■□□□ 1.53
PBX1-222ENST00000627490 TAF7Q15545 349 aaPredicted RBP24.62■■□□□ 1.53
PBX1-222ENST00000627490 FLIIQ13045 1269 aa24.62■■□□□ 1.53
PBX1-222ENST00000627490 VPS72Q15906 364 aa24.62■■□□□ 1.53
PBX1-222ENST00000627490 BARGINQ6ZT62 677 aa24.62■■□□□ 1.53
PBX1-222ENST00000627490 LRRCC1Q9C099 1032 aa24.62■■□□□ 1.53
PBX1-222ENST00000627490 LGR6Q9HBX8 967 aa24.62■■□□□ 1.53
PBX1-222ENST00000627490 MIS18AQ9NYP9 233 aa24.62■■□□□ 1.53
PBX1-222ENST00000627490 NKX1-1Q15270 411 aaPredicted RBP24.61■■□□□ 1.53
PBX1-222ENST00000627490 DCAF5Q96JK2 942 aa24.61■■□□□ 1.53
PBX1-222ENST00000627490 STAP2Q9UGK3 403 aa24.61■■□□□ 1.53
PBX1-222ENST00000627490 ANAPC15P60006 121 aa24.6■■□□□ 1.53
PBX1-222ENST00000627490 MPRIPQ6WCQ1 1025 aa24.6■■□□□ 1.53
PBX1-222ENST00000627490 IL17RAQ96F46 866 aa24.6■■□□□ 1.53
PBX1-222ENST00000627490 TNS2Q63HR2 1409 aa24.6■■□□□ 1.53
PBX1-222ENST00000627490 F6X3S4 739 aa24.59■■□□□ 1.53
PBX1-222ENST00000627490 MCCP23508 829 aa24.59■■□□□ 1.53
PBX1-222ENST00000627490 ARXQ96QS3 562 aa24.59■■□□□ 1.53
PBX1-222ENST00000627490 TEFQ10587 303 aa24.58■■□□□ 1.53
PBX1-222ENST00000627490 DDX49Q9Y6V7 483 aaKnown RBP24.58■■□□□ 1.53
PBX1-222ENST00000627490 APBB1O00213 710 aa24.57■■□□□ 1.52
PBX1-222ENST00000627490 ZNF445P59923 1031 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms