RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 GOPCQ9HD26 462 aa7.89□□□□□ -1.15
VBP1-204ENST00000625964 ATXN7O15265 892 aaPredicted RBP7.88□□□□□ -1.15
VBP1-204ENST00000625964 TRIM11Q96F44 468 aa7.88□□□□□ -1.15
VBP1-204ENST00000625964 PRRT3Q5FWE3 981 aa7.87□□□□□ -1.15
VBP1-204ENST00000625964 FCHSD1Q86WN1 690 aa7.87□□□□□ -1.15
VBP1-204ENST00000625964 PCMTD1Q96MG8 357 aaPredicted RBP7.87□□□□□ -1.15
VBP1-204ENST00000625964 KLF15Q9UIH9 416 aa7.87□□□□□ -1.15
VBP1-204ENST00000625964 SOCS7O14512 581 aa7.86□□□□□ -1.15
VBP1-204ENST00000625964 APBA3O96018 575 aa7.86□□□□□ -1.15
VBP1-204ENST00000625964 TNP2Q05952 138 aa7.86□□□□□ -1.15
VBP1-204ENST00000625964 GPBP1L1Q9HC44 474 aaPredicted RBP7.86□□□□□ -1.15
VBP1-204ENST00000625964 DYRK3O43781 588 aa7.85□□□□□ -1.15
VBP1-204ENST00000625964 MAPTP10636 758 aaKnown RBP7.85□□□□□ -1.15
VBP1-204ENST00000625964 USP4Q13107 963 aa7.85□□□□□ -1.15
VBP1-204ENST00000625964 TLR1Q15399 786 aa7.85□□□□□ -1.15
VBP1-204ENST00000625964 FOXD4L6Q3SYB3 417 aaPredicted RBP7.85□□□□□ -1.15
VBP1-204ENST00000625964 FOXD4L3Q6VB84 417 aaPredicted RBP7.85□□□□□ -1.15
VBP1-204ENST00000625964 NBPF11Q86T75 865 aa7.85□□□□□ -1.15
VBP1-204ENST00000625964 CEP126Q9P2H0 1117 aa7.85□□□□□ -1.15
VBP1-204ENST00000625964 PLA2G4AP47712 749 aa7.84□□□□□ -1.15
VBP1-204ENST00000625964 TPRNQ4KMQ1 711 aa7.84□□□□□ -1.15
VBP1-204ENST00000625964 CCDC85AQ96PX6 553 aaPredicted RBP7.84□□□□□ -1.15
VBP1-204ENST00000625964 NACC1Q96RE7 527 aa7.84□□□□□ -1.15
VBP1-204ENST00000625964 CDCA7Q9BWT1 371 aaPredicted RBP7.84□□□□□ -1.15
VBP1-204ENST00000625964 TPSG1Q9NRR2 321 aa7.84□□□□□ -1.15
VBP1-204ENST00000625964 ALAS2P22557 587 aa7.83□□□□□ -1.16
VBP1-204ENST00000625964 ZNF468Q5VIY5 522 aaPredicted RBP7.83□□□□□ -1.16
VBP1-204ENST00000625964 SIRT1Q96EB6 747 aa7.83□□□□□ -1.16
VBP1-204ENST00000625964 ATP4AP20648 1035 aa7.83□□□□□ -1.16
VBP1-204ENST00000625964 NIFKQ9BYG3 293 aaKnown RBP7.83□□□□□ -1.16
VBP1-204ENST00000625964 ETNK1Q9HBU6 452 aa7.83□□□□□ -1.16
VBP1-204ENST00000625964 PRR12Q9ULL5 1215 aa7.83□□□□□ -1.16
VBP1-204ENST00000625964 FAM157BP0CG42 384 aa7.82□□□□□ -1.16
VBP1-204ENST00000625964 CD33P20138 364 aa7.82□□□□□ -1.16
VBP1-204ENST00000625964 LAMC2Q13753 1193 aa7.82□□□□□ -1.16
VBP1-204ENST00000625964 ELOA3CA0A087WX78 387 aaPredicted RBP7.81□□□□□ -1.16
VBP1-204ENST00000625964 A0A1W2PNR3 127 aa7.81□□□□□ -1.16
VBP1-204ENST00000625964 DCDC2BA2VCK2 349 aa7.81□□□□□ -1.16
VBP1-204ENST00000625964 ELOA3DA6NLF2 546 aaPredicted RBP7.81□□□□□ -1.16
VBP1-204ENST00000625964 KHNYNO15037 678 aaKnown RBP7.81□□□□□ -1.16
VBP1-204ENST00000625964 ELOA3BQ3SY89 546 aa7.81□□□□□ -1.16
VBP1-204ENST00000625964 ELOA3Q8NG57 546 aa7.81□□□□□ -1.16
VBP1-204ENST00000625964 PCBP4P57723 403 aaKnown RBP7.8□□□□□ -1.16
VBP1-204ENST00000625964 NBPF1Q3BBV0 1214 aa7.8□□□□□ -1.16
VBP1-204ENST00000625964 ARSJQ5FYB0 599 aaPredicted RBP7.8□□□□□ -1.16
VBP1-204ENST00000625964 AIDAQ96BJ3 306 aa7.8□□□□□ -1.16
VBP1-204ENST00000625964 ZDHHC3Q9NYG2 299 aa7.8□□□□□ -1.16
VBP1-204ENST00000625964 NDUFB9Q9Y6M9 179 aa7.8□□□□□ -1.16
VBP1-204ENST00000625964 APBB1O00213 710 aa7.79□□□□□ -1.16
VBP1-204ENST00000625964 PRSS36Q5K4E3 855 aa7.79□□□□□ -1.16
VBP1-204ENST00000625964 SAMD5Q5TGI4 173 aa7.79□□□□□ -1.16
VBP1-204ENST00000625964 BANK1Q8NDB2 785 aa7.79□□□□□ -1.16
VBP1-204ENST00000625964 MARK1Q9P0L2 795 aa7.79□□□□□ -1.16
VBP1-204ENST00000625964 TATP17735 454 aaPredicted RBP7.78□□□□□ -1.16
VBP1-204ENST00000625964 PRDM6Q9NQX0 595 aa7.78□□□□□ -1.16
VBP1-204ENST00000625964 HCN2Q9UL51 889 aa7.78□□□□□ -1.16
VBP1-204ENST00000625964 DOLKQ9UPQ8 538 aa7.78□□□□□ -1.16
VBP1-204ENST00000625964 INHAP05111 366 aa7.78□□□□□ -1.16
VBP1-204ENST00000625964 H2AFB1P0C5Y9 115 aa7.78□□□□□ -1.16
VBP1-204ENST00000625964 H2AFB2P0C5Z0 115 aa7.78□□□□□ -1.16
VBP1-204ENST00000625964 TRIM28Q13263 835 aaKnown RBP7.78□□□□□ -1.16
VBP1-204ENST00000625964 GJA3Q9Y6H8 435 aa7.78□□□□□ -1.16
VBP1-204ENST00000625964 GPR37L1O60883 481 aa7.77□□□□□ -1.17
VBP1-204ENST00000625964 LRP8Q14114 963 aa7.77□□□□□ -1.17
VBP1-204ENST00000625964 MDFIQ99750 246 aa7.77□□□□□ -1.17
VBP1-204ENST00000625964 ADARB2-AS1A8MUL3 147 aa7.76□□□□□ -1.17
VBP1-204ENST00000625964 SMTNP53814 917 aa7.76□□□□□ -1.17
VBP1-204ENST00000625964 LCE1DQ5T752 114 aa7.76□□□□□ -1.17
VBP1-204ENST00000625964 PHTF2Q8N3S3 785 aa7.76□□□□□ -1.17
VBP1-204ENST00000625964 ZIC5Q96T25 663 aa7.76□□□□□ -1.17
VBP1-204ENST00000625964 EFSO43281 561 aa7.75□□□□□ -1.17
VBP1-204ENST00000625964 SIN3BO75182 1162 aa7.75□□□□□ -1.17
VBP1-204ENST00000625964 PRKCSHP14314 528 aaPredicted RBP7.75□□□□□ -1.17
VBP1-204ENST00000625964 GDF10P55107 478 aa7.75□□□□□ -1.17
VBP1-204ENST00000625964 C9orf172C9J069 976 aa7.74□□□□□ -1.17
VBP1-204ENST00000625964 SCNN1DP51172 638 aa7.74□□□□□ -1.17
VBP1-204ENST00000625964 SLFNL1Q499Z3 407 aa7.74□□□□□ -1.17
VBP1-204ENST00000625964 CDK2AP1O14519 115 aa7.73□□□□□ -1.17
VBP1-204ENST00000625964 STAU1O95793 577 aaKnown RBP7.73□□□□□ -1.17
VBP1-204ENST00000625964 EIF4G2P78344 907 aaKnown RBP eCLIP7.73□□□□□ -1.17
VBP1-204ENST00000625964 SYT9Q86SS6 491 aa7.73□□□□□ -1.17
VBP1-204ENST00000625964 GOLGA2P5Q9HBQ8 144 aa7.73□□□□□ -1.17
VBP1-204ENST00000625964 CHIC2Q9UKJ5 165 aa7.73□□□□□ -1.17
VBP1-204ENST00000625964 TNFRSF25Q93038 417 aa7.73□□□□□ -1.17
VBP1-204ENST00000625964 M0R082 166 aa7.72□□□□□ -1.17
VBP1-204ENST00000625964 COL9A3Q14050 684 aaPredicted RBP7.72□□□□□ -1.17
VBP1-204ENST00000625964 MTFR1Q15390 333 aa7.72□□□□□ -1.17
VBP1-204ENST00000625964 TSGA10IPQ3SY00 556 aa7.72□□□□□ -1.17
VBP1-204ENST00000625964 ZNF295-AS1Q8N0V1 137 aa7.72□□□□□ -1.17
VBP1-204ENST00000625964 ZNF417Q8TAU3 575 aa7.72□□□□□ -1.17
VBP1-204ENST00000625964 SLC4A9Q96Q91 983 aa7.72□□□□□ -1.17
VBP1-204ENST00000625964 ZNF587Q96SQ5 575 aaPredicted RBP7.72□□□□□ -1.17
VBP1-204ENST00000625964 STRN4Q9NRL3 753 aa7.72□□□□□ -1.17
VBP1-204ENST00000625964 HYAL3O43820 417 aaPredicted RBP7.71□□□□□ -1.18
VBP1-204ENST00000625964 OXLD1Q5BKU9 147 aa7.71□□□□□ -1.18
VBP1-204ENST00000625964 ADGRE1Q14246 886 aa7.7□□□□□ -1.18
VBP1-204ENST00000625964 BICDL1Q6ZP65 573 aa7.7□□□□□ -1.18
VBP1-204ENST00000625964 KRTAP19-1Q8IUB9 90 aa7.7□□□□□ -1.18
VBP1-204ENST00000625964 MICALL1Q8N3F8 863 aa7.7□□□□□ -1.18
VBP1-204ENST00000625964 MTMR14Q8NCE2 650 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms