RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 KCPQ6ZWJ8 1503 aa15.07■□□□□ 0
DDX41-218ENST00000625286 PRELPP51888 382 aa15.07■□□□□ 0
DDX41-218ENST00000625286 MRC1P22897 1456 aa15.07■□□□□ 0
DDX41-218ENST00000625286 PCNTO95613 3336 aa15.07■□□□□ 0
DDX41-218ENST00000625286 HTRA3P83110 453 aa15.06■□□□□ 0
DDX41-218ENST00000625286 NFIXQ14938 502 aa15.06■□□□□ 0
DDX41-218ENST00000625286 ZBTB1Q9Y2K1 713 aa15.06■□□□□ 0
DDX41-218ENST00000625286 APLP1P51693 650 aa15.05■□□□□ -0
DDX41-218ENST00000625286 NARFQ9UHQ1 456 aa15.05■□□□□ -0
DDX41-218ENST00000625286 NRXN2Q9P2S2 1712 aa15.04■□□□□ -0
DDX41-218ENST00000625286 ZPR1O75312 459 aa15.04■□□□□ -0
DDX41-218ENST00000625286 RNF181Q9P0P0 153 aa15.04■□□□□ -0
DDX41-218ENST00000625286 RASSF7Q02833 373 aa15.03■□□□□ -0
DDX41-218ENST00000625286 RBM46Q8TBY0 533 aaKnown RBP15.03■□□□□ -0
DDX41-218ENST00000625286 RRAGCQ9HB90 399 aa15.03■□□□□ -0
DDX41-218ENST00000625286 COL15A1P39059 1388 aa15.02■□□□□ -0
DDX41-218ENST00000625286 CC2D1BQ5T0F9 858 aaKnown RBP15.02■□□□□ -0
DDX41-218ENST00000625286 CCER1Q8TC90 406 aaPredicted RBP15.02■□□□□ -0
DDX41-218ENST00000625286 UBR2Q8IWV8 1755 aa15.02□□□□□ -0.01
DDX41-218ENST00000625286 CARMIL3Q8ND23 1372 aa15.01□□□□□ -0.01
DDX41-218ENST00000625286 SERPINB2P05120 415 aa15.01□□□□□ -0.01
DDX41-218ENST00000625286 CANXP27824 592 aaKnown RBP15.01□□□□□ -0.01
DDX41-218ENST00000625286 VSIG10Q8N0Z9 540 aa15.01□□□□□ -0.01
DDX41-218ENST00000625286 IL17REQ8NFR9 667 aa15.01□□□□□ -0.01
DDX41-218ENST00000625286 DIAPH1O60610 1272 aaKnown RBP15□□□□□ -0.01
DDX41-218ENST00000625286 EIF5P55010 431 aaKnown RBP15□□□□□ -0.01
DDX41-218ENST00000625286 COL3A1P02461 1466 aaPredicted RBP15□□□□□ -0.01
DDX41-218ENST00000625286 WDR90Q96KV7 1748 aa15□□□□□ -0.01
DDX41-218ENST00000625286 DLEC1Q9Y238 1755 aa14.99□□□□□ -0.01
DDX41-218ENST00000625286 ZNF496Q96IT1 587 aaPredicted RBP14.99□□□□□ -0.01
DDX41-218ENST00000625286 CCDC88AQ3V6T2 1871 aa14.99□□□□□ -0.01
DDX41-218ENST00000625286 BICDL1Q6ZP65 573 aa14.98□□□□□ -0.01
DDX41-218ENST00000625286 ANKRD31Q8N7Z5 1873 aa14.97□□□□□ -0.01
DDX41-218ENST00000625286 KDM2BQ8NHM5 1336 aa14.97□□□□□ -0.01
DDX41-218ENST00000625286 NFKBIEO00221 500 aa14.97□□□□□ -0.01
DDX41-218ENST00000625286 TBC1D9BQ66K14 1250 aa14.97□□□□□ -0.01
DDX41-218ENST00000625286 C2CD5Q86YS7 1000 aa14.97□□□□□ -0.01
DDX41-218ENST00000625286 CCDC24Q8N4L8 307 aa14.97□□□□□ -0.01
DDX41-218ENST00000625286 SIPA1L3O60292 1781 aaPredicted RBP14.96□□□□□ -0.01
DDX41-218ENST00000625286 POTECB2RU33 542 aa14.96□□□□□ -0.01
DDX41-218ENST00000625286 KCNQ3O43525 872 aa14.96□□□□□ -0.01
DDX41-218ENST00000625286 FSTL1Q12841 308 aa14.96□□□□□ -0.01
DDX41-218ENST00000625286 CNGB1Q14028 1251 aaPredicted RBP14.96□□□□□ -0.01
DDX41-218ENST00000625286 TTLL6Q8N841 843 aa14.96□□□□□ -0.01
DDX41-218ENST00000625286 PHACTR3Q96KR7 559 aa14.96□□□□□ -0.01
DDX41-218ENST00000625286 TBC1D2BQ9UPU7 963 aa14.96□□□□□ -0.01
DDX41-218ENST00000625286 LMNB1P20700 586 aa14.95□□□□□ -0.02
DDX41-218ENST00000625286 ZNF790Q6PG37 636 aa14.95□□□□□ -0.02
DDX41-218ENST00000625286 C16orf71Q8IYS4 520 aaPredicted RBP14.95□□□□□ -0.02
DDX41-218ENST00000625286 JMYQ8N9B5 988 aa14.95□□□□□ -0.02
DDX41-218ENST00000625286 KLRG1Q96E93 195 aa14.95□□□□□ -0.02
DDX41-218ENST00000625286 TNRC6CQ9HCJ0 1690 aaKnown RBP14.95□□□□□ -0.02
DDX41-218ENST00000625286 GLTPD2A6NH11 291 aa14.94□□□□□ -0.02
DDX41-218ENST00000625286 GNAT3A8MTJ3 354 aa14.94□□□□□ -0.02
DDX41-218ENST00000625286 A1BGP04217 495 aa14.94□□□□□ -0.02
DDX41-218ENST00000625286 HEG1Q9ULI3 1381 aa14.94□□□□□ -0.02
DDX41-218ENST00000625286 H0YIN7 160 aa14.93□□□□□ -0.02
DDX41-218ENST00000625286 U2SURPO15042 1029 aaKnown RBP14.93□□□□□ -0.02
DDX41-218ENST00000625286 STARD3NLO95772 234 aa14.93□□□□□ -0.02
DDX41-218ENST00000625286 PRR5LQ6MZQ0 368 aa14.93□□□□□ -0.02
DDX41-218ENST00000625286 COL11A2P13942 1736 aaPredicted RBP14.92□□□□□ -0.02
DDX41-218ENST00000625286 PRAMEF22A3QJZ6 481 aa14.92□□□□□ -0.02
DDX41-218ENST00000625286 COL13A1Q5TAT6 717 aaPredicted RBP14.92□□□□□ -0.02
DDX41-218ENST00000625286 TTC5Q8N0Z6 440 aa14.92□□□□□ -0.02
DDX41-218ENST00000625286 CEMIPQ8WUJ3 1361 aa14.92□□□□□ -0.02
DDX41-218ENST00000625286 NPC1L1Q9UHC9 1359 aa14.92□□□□□ -0.02
DDX41-218ENST00000625286 A0A087WZG4 1122 aa14.91□□□□□ -0.02
DDX41-218ENST00000625286 C21orf2O43822 256 aa14.91□□□□□ -0.02
DDX41-218ENST00000625286 CAMTA2O94983 1202 aa14.91□□□□□ -0.02
DDX41-218ENST00000625286 PIP4K2AP48426 406 aaPredicted RBP14.91□□□□□ -0.02
DDX41-218ENST00000625286 SMC1BQ8NDV3 1235 aa14.91□□□□□ -0.02
DDX41-218ENST00000625286 BRIP1Q9BX63 1249 aa14.91□□□□□ -0.02
DDX41-218ENST00000625286 ZNF219Q9P2Y4 722 aaPredicted RBP14.91□□□□□ -0.02
DDX41-218ENST00000625286 USP16Q9Y5T5 823 aa14.91□□□□□ -0.02
DDX41-218ENST00000625286 SLX4Q8IY92 1834 aa14.91□□□□□ -0.02
DDX41-218ENST00000625286 FER1L6Q2WGJ9 1857 aa14.91□□□□□ -0.02
DDX41-218ENST00000625286 ZC3H4Q9UPT8 1303 aaKnown RBP14.91□□□□□ -0.02
DDX41-218ENST00000625286 SCN7AQ01118 1682 aa14.9□□□□□ -0.02
DDX41-218ENST00000625286 TIAM2Q8IVF5 1701 aa14.9□□□□□ -0.02
DDX41-218ENST00000625286 VEGFAP15692 232 aaPredicted RBP14.9□□□□□ -0.02
DDX41-218ENST00000625286 IL6STP40189 918 aaPredicted RBP14.9□□□□□ -0.02
DDX41-218ENST00000625286 TEFQ10587 303 aa14.9□□□□□ -0.02
DDX41-218ENST00000625286 GAS2L2Q8NHY3 880 aa14.9□□□□□ -0.02
DDX41-218ENST00000625286 ZNF622Q969S3 477 aaKnown RBP eCLIP14.9□□□□□ -0.022e-12■■□□□ 11.6
DDX41-218ENST00000625286 RSPH6AQ9H0K4 717 aa14.9□□□□□ -0.02
DDX41-218ENST00000625286 ZNF330Q9Y3S2 320 aaPredicted RBP14.9□□□□□ -0.02
DDX41-218ENST00000625286 PRKAR2BP31323 418 aa14.89□□□□□ -0.03
DDX41-218ENST00000625286 TEX13AQ9BXU3 409 aaPredicted RBP14.89□□□□□ -0.03
DDX41-218ENST00000625286 DICER1Q9UPY3 1922 aaKnown RBP14.88□□□□□ -0.03
DDX41-218ENST00000625286 PDE6BP35913 854 aa14.88□□□□□ -0.03
DDX41-218ENST00000625286 FMNL2Q96PY5 1086 aa14.88□□□□□ -0.03
DDX41-218ENST00000625286 BTBD11A6QL63 1104 aa14.87□□□□□ -0.03
DDX41-218ENST00000625286 SRGNP10124 158 aa14.87□□□□□ -0.03
DDX41-218ENST00000625286 NBPF26B4DH59 902 aa14.86□□□□□ -0.03
DDX41-218ENST00000625286 POTEIP0CG38 1075 aa14.86□□□□□ -0.03
DDX41-218ENST00000625286 POTEJP0CG39 1038 aa14.86□□□□□ -0.03
DDX41-218ENST00000625286 NBPF10Q6P3W6 841 aaKnown RBP14.86□□□□□ -0.03
DDX41-218ENST00000625286 MCM10Q7L590 875 aa14.86□□□□□ -0.03
DDX41-218ENST00000625286 NBPF15Q8N660 670 aa14.86□□□□□ -0.03
DDX41-218ENST00000625286 C7orf43Q8WVR3 580 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms