RNA–Protein interactions for RNA: ENST00000624909.1

PCDHB9-203, Transcript of protocadherin beta 9, humanhuman

TSL 3

Gene PCDHB9, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-203ENST00000624909 GAS2L2Q8NHY3 880 aa10.73□□□□□ -0.69
PCDHB9-203ENST00000624909 HTATSF1O43719 755 aaKnown RBP10.72□□□□□ -0.69
PCDHB9-203ENST00000624909 AKAP4Q5JQC9 854 aa10.72□□□□□ -0.69
PCDHB9-203ENST00000624909 DIEXFQ68CQ4 756 aaKnown RBP10.72□□□□□ -0.69
PCDHB9-203ENST00000624909 DDX54Q8TDD1 881 aaKnown RBP10.72□□□□□ -0.69
PCDHB9-203ENST00000624909 DCAF5Q96JK2 942 aa10.72□□□□□ -0.69
PCDHB9-203ENST00000624909 RSPH6AQ9H0K4 717 aa10.72□□□□□ -0.69
PCDHB9-203ENST00000624909 EMILIN3Q9NT22 766 aa10.72□□□□□ -0.69
PCDHB9-203ENST00000624909 TESPA1A2RU30 521 aaPredicted RBP10.71□□□□□ -0.69
PCDHB9-203ENST00000624909 ERVV-2B6SEH9 535 aa10.71□□□□□ -0.69
PCDHB9-203ENST00000624909 CCER2I3L3R5 266 aa10.71□□□□□ -0.69
PCDHB9-203ENST00000624909 SEMA3EO15041 775 aa10.71□□□□□ -0.69
PCDHB9-203ENST00000624909 HMOX1P09601 288 aa10.71□□□□□ -0.69
PCDHB9-203ENST00000624909 RGPD2P0DJD1 1756 aa10.71□□□□□ -0.69
PCDHB9-203ENST00000624909 PHKG2P15735 406 aa10.71□□□□□ -0.69
PCDHB9-203ENST00000624909 PKD1L3Q7Z443 1732 aa10.71□□□□□ -0.69
PCDHB9-203ENST00000624909 AEBP1Q8IUX7 1158 aa10.71□□□□□ -0.69
PCDHB9-203ENST00000624909 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.71□□□□□ -0.69
PCDHB9-203ENST00000624909 BRWD3Q6RI45 1802 aa10.7□□□□□ -0.7
PCDHB9-203ENST00000624909 CYP27B1O15528 508 aa10.7□□□□□ -0.7
PCDHB9-203ENST00000624909 PRKAR2BP31323 418 aa10.7□□□□□ -0.7
PCDHB9-203ENST00000624909 SMYD5Q6GMV2 418 aa10.7□□□□□ -0.7
PCDHB9-203ENST00000624909 ZNF530Q6P9A1 599 aaPredicted RBP10.7□□□□□ -0.7
PCDHB9-203ENST00000624909 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.7□□□□□ -0.7
PCDHB9-203ENST00000624909 MAPK8IP3Q9UPT6 1336 aa10.69□□□□□ -0.7
PCDHB9-203ENST00000624909 SPDYE16A6NNV3 312 aaPredicted RBP10.69□□□□□ -0.7
PCDHB9-203ENST00000624909 DPYSL4O14531 572 aa10.69□□□□□ -0.7
PCDHB9-203ENST00000624909 PLSCR1O15162 318 aa10.69□□□□□ -0.7
PCDHB9-203ENST00000624909 UPF1Q92900 1129 aaKnown RBP eCLIP10.69□□□□□ -0.7
PCDHB9-203ENST00000624909 MRS2Q9HD23 443 aa10.69□□□□□ -0.7
PCDHB9-203ENST00000624909 GNAT3A8MTJ3 354 aa10.68□□□□□ -0.7
PCDHB9-203ENST00000624909 BAG6P46379 1132 aa10.68□□□□□ -0.7
PCDHB9-203ENST00000624909 LMOD3Q0VAK6 560 aa10.68□□□□□ -0.7
PCDHB9-203ENST00000624909 NGEFQ8N5V2 710 aa10.68□□□□□ -0.7
PCDHB9-203ENST00000624909 PNISRQ8TF01 805 aaKnown RBP10.68□□□□□ -0.7
PCDHB9-203ENST00000624909 RUNDC1Q96C34 613 aa10.68□□□□□ -0.7
PCDHB9-203ENST00000624909 PLEKHF1Q96S99 279 aa10.68□□□□□ -0.7
PCDHB9-203ENST00000624909 MTHFSDQ2M296 383 aaKnown RBP10.67□□□□□ -0.7
PCDHB9-203ENST00000624909 RTF1Q92541 710 aaKnown RBP10.67□□□□□ -0.7
PCDHB9-203ENST00000624909 TRIM37O94972 964 aa10.66□□□□□ -0.7
PCDHB9-203ENST00000624909 PDIA6Q15084 440 aa10.66□□□□□ -0.7
PCDHB9-203ENST00000624909 SMARCC1Q92922 1105 aaPredicted RBP10.66□□□□□ -0.7
PCDHB9-203ENST00000624909 ADAMTS8Q9UP79 889 aa10.66□□□□□ -0.7
PCDHB9-203ENST00000624909 MAP3K5Q99683 1374 aa10.65□□□□□ -0.7
PCDHB9-203ENST00000624909 PRIM1P49642 420 aaKnown RBP10.65□□□□□ -0.7
PCDHB9-203ENST00000624909 MAP3K9P80192 1104 aa10.65□□□□□ -0.7
PCDHB9-203ENST00000624909 NFE2L2Q16236 605 aa10.65□□□□□ -0.7
PCDHB9-203ENST00000624909 PHACTR3Q96KR7 559 aa10.65□□□□□ -0.7
PCDHB9-203ENST00000624909 TMOD3Q9NYL9 352 aa10.65□□□□□ -0.7
PCDHB9-203ENST00000624909 SHANK3Q9BYB0 1731 aa10.64□□□□□ -0.71
PCDHB9-203ENST00000624909 APBA3O96018 575 aa10.64□□□□□ -0.71
PCDHB9-203ENST00000624909 CABP4P57796 275 aa10.64□□□□□ -0.71
PCDHB9-203ENST00000624909 SLC27A3Q5K4L6 730 aa10.64□□□□□ -0.71
PCDHB9-203ENST00000624909 FAM182BQ5T319 152 aa10.64□□□□□ -0.71
PCDHB9-203ENST00000624909 BABAM1Q9NWV8 329 aa10.64□□□□□ -0.71
PCDHB9-203ENST00000624909 CEMIPQ8WUJ3 1361 aa10.64□□□□□ -0.71
PCDHB9-203ENST00000624909 NHSQ6T4R5 1651 aa10.63□□□□□ -0.71
PCDHB9-203ENST00000624909 RNMTO43148 476 aaKnown RBP10.63□□□□□ -0.71
PCDHB9-203ENST00000624909 CALD1Q05682 793 aaKnown RBP10.63□□□□□ -0.71
PCDHB9-203ENST00000624909 OXER1Q8TDS5 423 aa10.63□□□□□ -0.71
PCDHB9-203ENST00000624909 SYTL4Q96C24 671 aaPredicted RBP10.63□□□□□ -0.71
PCDHB9-203ENST00000624909 SLC52A2Q9HAB3 445 aa10.63□□□□□ -0.71
PCDHB9-203ENST00000624909 RGPD3A6NKT7 1758 aaPredicted RBP10.62□□□□□ -0.71
PCDHB9-203ENST00000624909 RGPD4Q7Z3J3 1758 aa10.62□□□□□ -0.71
PCDHB9-203ENST00000624909 KCNQ2O43526 872 aa10.62□□□□□ -0.71
PCDHB9-203ENST00000624909 TMPOP42166 694 aaKnown RBP10.62□□□□□ -0.71
PCDHB9-203ENST00000624909 TEFQ10587 303 aa10.62□□□□□ -0.71
PCDHB9-203ENST00000624909 MPRIPQ6WCQ1 1025 aa10.62□□□□□ -0.71
PCDHB9-203ENST00000624909 ACSBG1Q96GR2 724 aa10.62□□□□□ -0.71
PCDHB9-203ENST00000624909 SBF2Q86WG5 1849 aa10.61□□□□□ -0.71
PCDHB9-203ENST00000624909 KDM6AO15550 1401 aaPredicted RBP10.61□□□□□ -0.71
PCDHB9-203ENST00000624909 ADAMTS7Q9UKP4 1686 aa10.61□□□□□ -0.71
PCDHB9-203ENST00000624909 RIPK4P57078 832 aa10.61□□□□□ -0.71
PCDHB9-203ENST00000624909 CCDC27Q2M243 656 aa10.61□□□□□ -0.71
PCDHB9-203ENST00000624909 NFATC2IPQ8NCF5 419 aa10.61□□□□□ -0.71
PCDHB9-203ENST00000624909 PIGBQ92521 554 aa10.61□□□□□ -0.71
PCDHB9-203ENST00000624909 CAMKK2Q96RR4 588 aa10.61□□□□□ -0.71
PCDHB9-203ENST00000624909 MRC1P22897 1456 aa10.61□□□□□ -0.71
PCDHB9-203ENST00000624909 TBC1D12O60347 775 aa10.6□□□□□ -0.71
PCDHB9-203ENST00000624909 CCDC184Q52MB2 194 aa10.6□□□□□ -0.71
PCDHB9-203ENST00000624909 IL17REQ8NFR9 667 aa10.6□□□□□ -0.71
PCDHB9-203ENST00000624909 SLC34A2O95436 690 aa10.59□□□□□ -0.71
PCDHB9-203ENST00000624909 TAF7Q15545 349 aaPredicted RBP10.59□□□□□ -0.71
PCDHB9-203ENST00000624909 NBPF14Q5TI25 921 aa10.59□□□□□ -0.71
PCDHB9-203ENST00000624909 PTCD2Q8WV60 388 aaKnown RBP10.59□□□□□ -0.71
PCDHB9-203ENST00000624909 OTUD5Q96G74 571 aa10.59□□□□□ -0.71
PCDHB9-203ENST00000624909 LGR6Q9HBX8 967 aa10.59□□□□□ -0.71
PCDHB9-203ENST00000624909 TNS1Q9HBL0 1735 aaKnown RBP10.58□□□□□ -0.72
PCDHB9-203ENST00000624909 KAT6BQ8WYB5 2073 aa10.58□□□□□ -0.72
PCDHB9-203ENST00000624909 SCN11AQ9UI33 1791 aa10.58□□□□□ -0.72
PCDHB9-203ENST00000624909 PALLDQ8WX93 1383 aa10.58□□□□□ -0.72
PCDHB9-203ENST00000624909 MLLT3P42568 568 aaPredicted RBP10.58□□□□□ -0.72
PCDHB9-203ENST00000624909 EN1Q05925 392 aaPredicted RBP10.58□□□□□ -0.72
PCDHB9-203ENST00000624909 TXNRD1Q16881 649 aa10.58□□□□□ -0.72
PCDHB9-203ENST00000624909 TTC5Q8N0Z6 440 aa10.58□□□□□ -0.72
PCDHB9-203ENST00000624909 TEX13AQ9BXU3 409 aaPredicted RBP10.58□□□□□ -0.72
PCDHB9-203ENST00000624909 CHMP4AQ9BY43 222 aa10.58□□□□□ -0.72
PCDHB9-203ENST00000624909 DOT1LQ8TEK3 1739 aa10.58□□□□□ -0.72
PCDHB9-203ENST00000624909 POTEMA6NI47 508 aa10.57□□□□□ -0.72
PCDHB9-203ENST00000624909 APAF1O14727 1248 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms