RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 PPP1R18Q6NYC8 613 aa10.55□□□□□ -0.72
CDKL5-206ENST00000623610 IER2Q9BTL4 223 aa10.55□□□□□ -0.72
CDKL5-206ENST00000623610 AVENQ9NQS1 362 aaPredicted RBP10.55□□□□□ -0.72
CDKL5-206ENST00000623610 MRVI1Q9Y6F6 885 aa10.55□□□□□ -0.72
CDKL5-206ENST00000623610 KDM5CP41229 1560 aa10.55□□□□□ -0.72
CDKL5-206ENST00000623610 ARHGEF40Q8TER5 1519 aa10.55□□□□□ -0.72
CDKL5-206ENST00000623610 PALM3A6NDB9 673 aaPredicted RBP10.55□□□□□ -0.72
CDKL5-206ENST00000623610 PPP1R37O75864 691 aa10.55□□□□□ -0.72
CDKL5-206ENST00000623610 C8orf48Q96LL4 319 aa10.55□□□□□ -0.72
CDKL5-206ENST00000623610 RAI14Q9P0K7 980 aa10.55□□□□□ -0.72
CDKL5-206ENST00000623610 AKAP2Q9Y2D5 859 aa10.55□□□□□ -0.72
CDKL5-206ENST00000623610 ZFYVE16Q7Z3T8 1539 aa10.54□□□□□ -0.72
CDKL5-206ENST00000623610 VGLL3A8MV65 326 aa10.54□□□□□ -0.72
CDKL5-206ENST00000623610 IFRD1O00458 451 aaPredicted RBP10.54□□□□□ -0.72
CDKL5-206ENST00000623610 FOSP01100 380 aaPredicted RBP10.54□□□□□ -0.72
CDKL5-206ENST00000623610 GNALP38405 381 aa10.54□□□□□ -0.72
CDKL5-206ENST00000623610 LDLRAD1Q5T700 205 aa10.54□□□□□ -0.72
CDKL5-206ENST00000623610 PAF1Q8N7H5 531 aa10.54□□□□□ -0.72
CDKL5-206ENST00000623610 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.54□□□□□ -0.72
CDKL5-206ENST00000623610 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.54□□□□□ -0.72
CDKL5-206ENST00000623610 CAPN10Q9HC96 672 aa10.54□□□□□ -0.72
CDKL5-206ENST00000623610 NOL7Q9UMY1 257 aaKnown RBP10.54□□□□□ -0.72
CDKL5-206ENST00000623610 IPO8O15397 1037 aaKnown RBP10.54□□□□□ -0.72
CDKL5-206ENST00000623610 SIM2Q14190 667 aaPredicted RBP10.54□□□□□ -0.72
CDKL5-206ENST00000623610 B4GALNT3Q6L9W6 998 aa10.54□□□□□ -0.72
CDKL5-206ENST00000623610 NGEFQ8N5V2 710 aa10.54□□□□□ -0.72
CDKL5-206ENST00000623610 RUNDC1Q96C34 613 aa10.54□□□□□ -0.72
CDKL5-206ENST00000623610 ALDH8A1Q9H2A2 487 aaPredicted RBP10.54□□□□□ -0.72
CDKL5-206ENST00000623610 CLEC11AQ9Y240 323 aa10.54□□□□□ -0.72
CDKL5-206ENST00000623610 LZTS1Q9Y250 596 aa10.54□□□□□ -0.72
CDKL5-206ENST00000623610 MAGI2Q86UL8 1455 aa10.53□□□□□ -0.72
CDKL5-206ENST00000623610 DNAJC6O75061 913 aa10.53□□□□□ -0.72
CDKL5-206ENST00000623610 FECHP22830 423 aa10.53□□□□□ -0.72
CDKL5-206ENST00000623610 DNAJA1P31689 397 aaKnown RBP10.53□□□□□ -0.72
CDKL5-206ENST00000623610 TNNI2P48788 182 aa10.53□□□□□ -0.72
CDKL5-206ENST00000623610 PSMD2Q13200 908 aa10.53□□□□□ -0.72
CDKL5-206ENST00000623610 ALDH1L2Q3SY69 923 aa10.53□□□□□ -0.72
CDKL5-206ENST00000623610 CCDC92Q53HC0 331 aaPredicted RBP10.53□□□□□ -0.72
CDKL5-206ENST00000623610 AS3MTQ9HBK9 375 aa10.53□□□□□ -0.72
CDKL5-206ENST00000623610 SMC3Q9UQE7 1217 aa10.53□□□□□ -0.72
CDKL5-206ENST00000623610 KIAA1107Q9UPP5 1409 aa10.53□□□□□ -0.72
CDKL5-206ENST00000623610 HECW2Q9P2P5 1572 aa10.53□□□□□ -0.72
CDKL5-206ENST00000623610 SCAMP3O14828 347 aaKnown RBP10.52□□□□□ -0.72
CDKL5-206ENST00000623610 WDR75Q8IWA0 830 aaKnown RBP10.52□□□□□ -0.72
CDKL5-206ENST00000623610 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.52□□□□□ -0.72
CDKL5-206ENST00000623610 OSBPL2Q9H1P3 480 aa10.52□□□□□ -0.72
CDKL5-206ENST00000623610 RETREG1Q9H6L5 497 aa10.52□□□□□ -0.72
CDKL5-206ENST00000623610 BIN2Q9UBW5 565 aaPredicted RBP10.52□□□□□ -0.72
CDKL5-206ENST00000623610 SLC45A1Q9Y2W3 748 aa10.52□□□□□ -0.72
CDKL5-206ENST00000623610 SIGLEC1Q9BZZ2 1709 aa10.52□□□□□ -0.73
CDKL5-206ENST00000623610 CAMSAP2Q08AD1 1489 aa10.52□□□□□ -0.73
CDKL5-206ENST00000623610 PLEKHH2Q8IVE3 1493 aa10.52□□□□□ -0.73
CDKL5-206ENST00000623610 RFC5P40937 340 aa10.52□□□□□ -0.73
CDKL5-206ENST00000623610 DUSP27Q5VZP5 1158 aa10.52□□□□□ -0.73
CDKL5-206ENST00000623610 LARP1BQ659C4 914 aaKnown RBP10.52□□□□□ -0.73
CDKL5-206ENST00000623610 MYOM3Q5VTT5 1437 aa10.52□□□□□ -0.73
CDKL5-206ENST00000623610 MBD5Q9P267 1494 aa10.51□□□□□ -0.73
CDKL5-206ENST00000623610 COL6A1P12109 1028 aa10.51□□□□□ -0.73
CDKL5-206ENST00000623610 NAT1P18440 290 aa10.51□□□□□ -0.73
CDKL5-206ENST00000623610 CBLBQ13191 982 aa10.51□□□□□ -0.73
CDKL5-206ENST00000623610 METTL16Q86W50 562 aaKnown RBP10.51□□□□□ -0.73
CDKL5-206ENST00000623610 MLH3Q9UHC1 1453 aa10.51□□□□□ -0.73
CDKL5-206ENST00000623610 KIDINS220Q9ULH0 1771 aa10.51□□□□□ -0.73
CDKL5-206ENST00000623610 TNFRSF10BO14763 440 aa10.51□□□□□ -0.73
CDKL5-206ENST00000623610 PPP1R12AO14974 1030 aaPredicted RBP10.51□□□□□ -0.73
CDKL5-206ENST00000623610 LMNB1P20700 586 aa10.51□□□□□ -0.73
CDKL5-206ENST00000623610 C10orf62Q5T681 223 aaPredicted RBP10.51□□□□□ -0.73
CDKL5-206ENST00000623610 BANK1Q8NDB2 785 aa10.51□□□□□ -0.73
CDKL5-206ENST00000623610 PRR29P0C7W0 189 aa10.5□□□□□ -0.73
CDKL5-206ENST00000623610 PEX19P40855 299 aa10.5□□□□□ -0.73
CDKL5-206ENST00000623610 PSMC1P62191 440 aaKnown RBP10.5□□□□□ -0.73
CDKL5-206ENST00000623610 CCDC93Q567U6 631 aa10.5□□□□□ -0.73
CDKL5-206ENST00000623610 NYAP1Q6ZVC0 841 aa10.5□□□□□ -0.73
CDKL5-206ENST00000623610 TTC30AQ86WT1 665 aa10.5□□□□□ -0.73
CDKL5-206ENST00000623610 VPS37AQ8NEZ2 397 aa10.5□□□□□ -0.73
CDKL5-206ENST00000623610 SPDYE1Q8NFV5 336 aaPredicted RBP10.5□□□□□ -0.73
CDKL5-206ENST00000623610 ABCA6Q8N139 1617 aa10.5□□□□□ -0.73
CDKL5-206ENST00000623610 SPAG9O60271 1321 aaKnown RBP10.5□□□□□ -0.73
CDKL5-206ENST00000623610 EID1Q9Y6B2 187 aa10.49□□□□□ -0.73
CDKL5-206ENST00000623610 ATP10AO60312 1499 aa10.49□□□□□ -0.73
CDKL5-206ENST00000623610 DIP2CQ9Y2E4 1556 aa10.49□□□□□ -0.73
CDKL5-206ENST00000623610 RGS20O76081 388 aa10.49□□□□□ -0.73
CDKL5-206ENST00000623610 RNF217Q8TC41 542 aa10.49□□□□□ -0.73
CDKL5-206ENST00000623610 CCDC47Q96A33 483 aaKnown RBP10.49□□□□□ -0.73
CDKL5-206ENST00000623610 LARP6Q9BRS8 491 aaKnown RBP10.49□□□□□ -0.73
CDKL5-206ENST00000623610 MIA2Q96PC5 1412 aa10.48□□□□□ -0.73
CDKL5-206ENST00000623610 NAT2P11245 290 aa10.48□□□□□ -0.73
CDKL5-206ENST00000623610 FAM160A1Q05DH4 1040 aa10.48□□□□□ -0.73
CDKL5-206ENST00000623610 RBL2Q08999 1139 aa10.48□□□□□ -0.73
CDKL5-206ENST00000623610 CCSAPQ6IQ19 270 aaPredicted RBP10.48□□□□□ -0.73
CDKL5-206ENST00000623610 MFRPQ9BY79 579 aa10.48□□□□□ -0.73
CDKL5-206ENST00000623610 C9orf84Q5VXU9 1444 aa10.48□□□□□ -0.73
CDKL5-206ENST00000623610 NPHP1O15259 732 aa10.48□□□□□ -0.73
CDKL5-206ENST00000623610 HMMRO75330 724 aa10.48□□□□□ -0.73
CDKL5-206ENST00000623610 RNASEH2AO75792 299 aaKnown RBP10.48□□□□□ -0.73
CDKL5-206ENST00000623610 ATICP31939 592 aa10.48□□□□□ -0.73
CDKL5-206ENST00000623610 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.48□□□□□ -0.73
CDKL5-206ENST00000623610 SUGP1Q8IWZ8 645 aaKnown RBP10.48□□□□□ -0.73
CDKL5-206ENST00000623610 STK32AQ8WU08 396 aa10.48□□□□□ -0.73
CDKL5-206ENST00000623610 ARMC5Q96C12 935 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms