RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-231ENST00000622045 VGLL3A8MV65 326 aa17.24■□□□□ 0.35
SYNRG-231ENST00000622045 TMEM131LA2VDJ0 1609 aa17.24■□□□□ 0.35
SYNRG-231ENST00000622045 TTC21BQ7Z4L5 1316 aa17.24■□□□□ 0.35
SYNRG-231ENST00000622045 GTF2E1P29083 439 aaPredicted RBP17.23■□□□□ 0.35
SYNRG-231ENST00000622045 C16orf45Q96MC5 204 aaPredicted RBP17.23■□□□□ 0.35
SYNRG-231ENST00000622045 PTGS1P23219 599 aa17.23■□□□□ 0.35
SYNRG-231ENST00000622045 AMPHP49418 695 aa17.23■□□□□ 0.35
SYNRG-231ENST00000622045 CCDC30Q5VVM6 783 aa17.23■□□□□ 0.35
SYNRG-231ENST00000622045 DIP2CQ9Y2E4 1556 aa17.23■□□□□ 0.35
SYNRG-231ENST00000622045 ATP8B2P98198 1209 aa17.23■□□□□ 0.35
SYNRG-231ENST00000622045 KNDC1Q76NI1 1749 aa17.23■□□□□ 0.35
SYNRG-231ENST00000622045 UNC5CLQ8IV45 518 aa17.23■□□□□ 0.35
SYNRG-231ENST00000622045 SURF6O75683 361 aaKnown RBP17.22■□□□□ 0.35
SYNRG-231ENST00000622045 UBTFL1P0CB47 393 aaPredicted RBP17.22■□□□□ 0.35
SYNRG-231ENST00000622045 DRC7Q8IY82 874 aa17.22■□□□□ 0.35
SYNRG-231ENST00000622045 ACEP12821 1306 aa17.22■□□□□ 0.35
SYNRG-231ENST00000622045 METP08581 1390 aa17.22■□□□□ 0.35
SYNRG-231ENST00000622045 HDGFP51858 240 aaKnown RBP17.22■□□□□ 0.35
SYNRG-231ENST00000622045 CLTCQ00610 1675 aaKnown RBP17.21■□□□□ 0.35
SYNRG-231ENST00000622045 CPS1P31327 1500 aa17.21■□□□□ 0.35
SYNRG-231ENST00000622045 LRMPQ12912 555 aa17.21■□□□□ 0.34
SYNRG-231ENST00000622045 ZNF592Q92610 1267 aa17.21■□□□□ 0.34
SYNRG-231ENST00000622045 ANKRD7Q92527 254 aa17.2■□□□□ 0.34
SYNRG-231ENST00000622045 PRR36Q9H6K5 1346 aa17.2■□□□□ 0.34
SYNRG-231ENST00000622045 NCBP1Q09161 790 aaKnown RBP17.2■□□□□ 0.34
SYNRG-231ENST00000622045 MAP3K19Q56UN5 1328 aa17.19■□□□□ 0.34
SYNRG-231ENST00000622045 CAMK4Q16566 473 aa17.19■□□□□ 0.34
SYNRG-231ENST00000622045 OS9Q13438 667 aaPredicted RBP17.19■□□□□ 0.34
SYNRG-231ENST00000622045 SMC3Q9UQE7 1217 aa17.19■□□□□ 0.34
SYNRG-231ENST00000622045 CPA1P15085 419 aa17.18■□□□□ 0.34
SYNRG-231ENST00000622045 UBE2HP62256 183 aa17.18■□□□□ 0.34
SYNRG-231ENST00000622045 IL25Q9H293 177 aa17.18■□□□□ 0.34
SYNRG-231ENST00000622045 ZSCAN22P10073 491 aaPredicted RBP17.18■□□□□ 0.34
SYNRG-231ENST00000622045 DNM1Q05193 864 aaKnown RBP17.18■□□□□ 0.34
SYNRG-231ENST00000622045 CCDC186Q7Z3E2 898 aa17.18■□□□□ 0.34
SYNRG-231ENST00000622045 LTV1Q96GA3 475 aaPredicted RBP17.18■□□□□ 0.34
SYNRG-231ENST00000622045 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.17■□□□□ 0.34
SYNRG-231ENST00000622045 V9GYY5 206 aaPredicted RBP17.17■□□□□ 0.34
SYNRG-231ENST00000622045 SYT1P21579 422 aa17.17■□□□□ 0.34
SYNRG-231ENST00000622045 CWC27Q6UX04 472 aaKnown RBP17.17■□□□□ 0.34
SYNRG-231ENST00000622045 GOLGA6L6A8MZA4 724 aa17.17■□□□□ 0.34
SYNRG-231ENST00000622045 EIF2S2P20042 333 aaKnown RBP17.17■□□□□ 0.34
SYNRG-231ENST00000622045 DDX54Q8TDD1 881 aaKnown RBP17.17■□□□□ 0.34
SYNRG-231ENST00000622045 OGFRQ9NZT2 677 aa17.17■□□□□ 0.34
SYNRG-231ENST00000622045 NRBP1Q9UHY1 535 aa17.17■□□□□ 0.34
SYNRG-231ENST00000622045 PREX1Q8TCU6 1659 aa17.16■□□□□ 0.34
SYNRG-231ENST00000622045 STX6O43752 255 aa17.16■□□□□ 0.34
SYNRG-231ENST00000622045 PDE4CQ08493 712 aa17.16■□□□□ 0.34
SYNRG-231ENST00000622045 NGDNQ8NEJ9 315 aaKnown RBP17.16■□□□□ 0.34
SYNRG-231ENST00000622045 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.16■□□□□ 0.34
SYNRG-231ENST00000622045 DLG5Q8TDM6 1919 aa17.16■□□□□ 0.34
SYNRG-231ENST00000622045 LUZP1Q86V48 1076 aa17.16■□□□□ 0.34
SYNRG-231ENST00000622045 TMEM51Q9NW97 253 aa17.16■□□□□ 0.34
SYNRG-231ENST00000622045 ATP6V1DQ9Y5K8 247 aa17.16■□□□□ 0.34
SYNRG-231ENST00000622045 VPS37CA5D8V6 355 aaPredicted RBP17.16■□□□□ 0.34
SYNRG-231ENST00000622045 RPAP1Q9BWH6 1393 aaPredicted RBP17.15■□□□□ 0.34
SYNRG-231ENST00000622045 HSPA4P34932 840 aa17.15■□□□□ 0.34
SYNRG-231ENST00000622045 PPP1R42Q7Z4L9 355 aa17.15■□□□□ 0.34
SYNRG-231ENST00000622045 STAP2Q9UGK3 403 aa17.15■□□□□ 0.34
SYNRG-231ENST00000622045 SPG7Q9UQ90 795 aa17.15■□□□□ 0.34
SYNRG-231ENST00000622045 ERICH4A6NGS2 130 aa17.15■□□□□ 0.34
SYNRG-231ENST00000622045 SRGAP3O43295 1099 aa17.15■□□□□ 0.34
SYNRG-231ENST00000622045 CKAP2LQ8IYA6 745 aa17.15■□□□□ 0.34
SYNRG-231ENST00000622045 TNNT1P13805 278 aa17.15■□□□□ 0.34
SYNRG-231ENST00000622045 CRB1P82279 1406 aa17.15■□□□□ 0.34
SYNRG-231ENST00000622045 A2ML1A8K2U0 1454 aa17.14■□□□□ 0.34
SYNRG-231ENST00000622045 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.14■□□□□ 0.33
SYNRG-231ENST00000622045 CTIFO43310 598 aaKnown RBP17.14■□□□□ 0.33
SYNRG-231ENST00000622045 FAM69CQ0P6D2 419 aa17.14■□□□□ 0.33
SYNRG-231ENST00000622045 CNTROBQ8N137 903 aa17.14■□□□□ 0.33
SYNRG-231ENST00000622045 EYA1Q99502 592 aa17.14■□□□□ 0.33
SYNRG-231ENST00000622045 USP44Q9H0E7 712 aa17.14■□□□□ 0.33
SYNRG-231ENST00000622045 SALL3Q9BXA9 1300 aa17.14■□□□□ 0.33
SYNRG-231ENST00000622045 KCNJ4P48050 445 aa17.14■□□□□ 0.33
SYNRG-231ENST00000622045 HDGFL1Q5TGJ6 251 aa17.14■□□□□ 0.33
SYNRG-231ENST00000622045 LIMCH1Q9UPQ0 1083 aa17.14■□□□□ 0.33
SYNRG-231ENST00000622045 AK2P54819 239 aa17.14■□□□□ 0.33
SYNRG-231ENST00000622045 FEZ1Q99689 392 aa17.14■□□□□ 0.33
SYNRG-231ENST00000622045 GNAT3A8MTJ3 354 aa17.13■□□□□ 0.33
SYNRG-231ENST00000622045 NPHP1O15259 732 aa17.13■□□□□ 0.33
SYNRG-231ENST00000622045 F13A1P00488 732 aa17.13■□□□□ 0.33
SYNRG-231ENST00000622045 CTNNA3Q9UI47 895 aa17.13■□□□□ 0.33
SYNRG-231ENST00000622045 DLC1Q96QB1 1528 aa17.13■□□□□ 0.33
SYNRG-231ENST00000622045 CASTP20810 708 aaKnown RBP17.13■□□□□ 0.33
SYNRG-231ENST00000622045 CDK11BP21127 795 aaKnown RBP17.13■□□□□ 0.33
SYNRG-231ENST00000622045 FERMT3Q86UX7 667 aa17.13■□□□□ 0.33
SYNRG-231ENST00000622045 CCDC83Q8IWF9 413 aa17.13■□□□□ 0.33
SYNRG-231ENST00000622045 NUTM2GQ5VZR2 741 aa17.13■□□□□ 0.33
SYNRG-231ENST00000622045 FAM173BQ6P4H8 233 aa17.13■□□□□ 0.33
SYNRG-231ENST00000622045 RHPN1Q8TCX5 695 aa17.13■□□□□ 0.33
SYNRG-231ENST00000622045 FUCA2Q9BTY2 467 aa17.13■□□□□ 0.33
SYNRG-231ENST00000622045 SNX14Q9Y5W7 946 aa17.13■□□□□ 0.33
SYNRG-231ENST00000622045 CCDC192P0DO97 292 aa17.12■□□□□ 0.33
SYNRG-231ENST00000622045 TCHHQ07283 1943 aa17.12■□□□□ 0.33
SYNRG-231ENST00000622045 SOS1Q07889 1333 aaPredicted RBP17.12■□□□□ 0.33
SYNRG-231ENST00000622045 TPD52L1Q16890 204 aaPredicted RBP17.12■□□□□ 0.33
SYNRG-231ENST00000622045 CYB5RLQ6IPT4 315 aa17.12■□□□□ 0.33
SYNRG-231ENST00000622045 TRIM5Q9C035 493 aa17.12■□□□□ 0.33
SYNRG-231ENST00000622045 CCDC112Q8NEF3 446 aa17.12■□□□□ 0.33
SYNRG-231ENST00000622045 RASEFQ8IZ41 740 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms