RNA–Protein interactions for RNA: ENST00000621987.4

FMR1-220, Transcript of fragile X mental retardation 1, humanhuman

TSL 5 BASIC

Gene FMR1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-220ENST00000621987 CHPF2Q9P2E5 772 aa16.38■□□□□ 0.21
FMR1-220ENST00000621987 DBF4Q9UBU7 674 aaPredicted RBP16.38■□□□□ 0.21
FMR1-220ENST00000621987 FLIIQ13045 1269 aa16.37■□□□□ 0.21
FMR1-220ENST00000621987 ASAP1Q9ULH1 1129 aa16.37■□□□□ 0.21
FMR1-220ENST00000621987 N4BP2Q86UW6 1770 aaPredicted RBP16.36■□□□□ 0.21
FMR1-220ENST00000621987 PDIA6Q15084 440 aa16.36■□□□□ 0.21
FMR1-220ENST00000621987 VSIG10Q8N0Z9 540 aa16.36■□□□□ 0.21
FMR1-220ENST00000621987 DDX21Q9NR30 783 aaKnown RBP eCLIP16.36■□□□□ 0.21
FMR1-220ENST00000621987 USP16Q9Y5T5 823 aa16.36■□□□□ 0.21
FMR1-220ENST00000621987 ZNF772Q68DY9 489 aaPredicted RBP16.35■□□□□ 0.21
FMR1-220ENST00000621987 INTS3Q68E01 1043 aaKnown RBP16.35■□□□□ 0.21
FMR1-220ENST00000621987 B4GALNT3Q6L9W6 998 aa16.35■□□□□ 0.21
FMR1-220ENST00000621987 SEPT12Q8IYM1 358 aa16.35■□□□□ 0.21
FMR1-220ENST00000621987 PHAXQ9H814 394 aaKnown RBP16.35■□□□□ 0.21
FMR1-220ENST00000621987 DDX19BQ9UMR2 479 aa16.35■□□□□ 0.21
FMR1-220ENST00000621987 CICQ96RK0 1608 aaPredicted RBP16.34■□□□□ 0.21
FMR1-220ENST00000621987 NHSQ6T4R5 1651 aa16.34■□□□□ 0.21
FMR1-220ENST00000621987 A0A0G2JS52 829 aa16.34■□□□□ 0.21
FMR1-220ENST00000621987 PTCD1O75127 700 aaKnown RBP16.34■□□□□ 0.21
FMR1-220ENST00000621987 MYT1Q01538 1121 aa16.34■□□□□ 0.21
FMR1-220ENST00000621987 PROSER3Q2NL68 480 aa16.34■□□□□ 0.21
FMR1-220ENST00000621987 ITPRIPQ8IWB1 547 aa16.34■□□□□ 0.21
FMR1-220ENST00000621987 SYTL4Q96C24 671 aaPredicted RBP16.34■□□□□ 0.21
FMR1-220ENST00000621987 ACSBG1Q96GR2 724 aa16.34■□□□□ 0.21
FMR1-220ENST00000621987 CCDC136Q96JN2 1154 aa16.34■□□□□ 0.21
FMR1-220ENST00000621987 HYPKQ9NX55 129 aa16.34■□□□□ 0.21
FMR1-220ENST00000621987 ERBB4Q15303 1308 aa16.34■□□□□ 0.21
FMR1-220ENST00000621987 PXDNLA1KZ92 1463 aa16.34■□□□□ 0.21
FMR1-220ENST00000621987 TJP1Q07157 1748 aa16.33■□□□□ 0.2
FMR1-220ENST00000621987 ANXA1P04083 346 aa16.32■□□□□ 0.2
FMR1-220ENST00000621987 FKBP5Q13451 457 aaPredicted RBP16.32■□□□□ 0.2
FMR1-220ENST00000621987 LRP10Q7Z4F1 713 aa16.32■□□□□ 0.2
FMR1-220ENST00000621987 SLC4A9Q96Q91 983 aa16.31■□□□□ 0.2
FMR1-220ENST00000621987 TEX13AQ9BXU3 409 aaPredicted RBP16.31■□□□□ 0.2
FMR1-220ENST00000621987 ZBTB40Q9NUA8 1239 aa16.31■□□□□ 0.2
FMR1-220ENST00000621987 BRWD3Q6RI45 1802 aa16.31■□□□□ 0.2
FMR1-220ENST00000621987 SBF2Q86WG5 1849 aa16.31■□□□□ 0.2
FMR1-220ENST00000621987 ZNF831Q5JPB2 1677 aa16.3■□□□□ 0.2
FMR1-220ENST00000621987 F6X3S4 739 aa16.3■□□□□ 0.2
FMR1-220ENST00000621987 ZBTB7BO15156 539 aaPredicted RBP16.3■□□□□ 0.2
FMR1-220ENST00000621987 KCNQ2O43526 872 aa16.3■□□□□ 0.2
FMR1-220ENST00000621987 RBM6P78332 1123 aaKnown RBP16.3■□□□□ 0.2
FMR1-220ENST00000621987 ADCY9O60503 1353 aa16.29■□□□□ 0.2
FMR1-220ENST00000621987 CCT4P50991 539 aaKnown RBP16.29■□□□□ 0.2
FMR1-220ENST00000621987 CHMP4BQ9H444 224 aaKnown RBP16.29■□□□□ 0.2
FMR1-220ENST00000621987 KAT6BQ8WYB5 2073 aa16.29■□□□□ 0.2
FMR1-220ENST00000621987 NBPF26B4DH59 902 aa16.28■□□□□ 0.2
FMR1-220ENST00000621987 NBPF14Q5TI25 921 aa16.28■□□□□ 0.2
FMR1-220ENST00000621987 NBPF10Q6P3W6 841 aaKnown RBP16.28■□□□□ 0.2
FMR1-220ENST00000621987 DNAJC10Q8IXB1 793 aa16.28■□□□□ 0.2
FMR1-220ENST00000621987 NBPF15Q8N660 670 aa16.28■□□□□ 0.2
FMR1-220ENST00000621987 SMARCC1Q92922 1105 aaPredicted RBP16.28■□□□□ 0.2
FMR1-220ENST00000621987 RBM42Q9BTD8 480 aaKnown RBP16.28■□□□□ 0.2
FMR1-220ENST00000621987 BTAF1O14981 1849 aa16.28■□□□□ 0.2
FMR1-220ENST00000621987 ATP10DQ9P241 1426 aa16.28■□□□□ 0.2
FMR1-220ENST00000621987 PCDHB15Q9Y5E8 787 aa16.27■□□□□ 0.2
FMR1-220ENST00000621987 PALLDQ8WX93 1383 aa16.27■□□□□ 0.19
FMR1-220ENST00000621987 KDM2BQ8NHM5 1336 aa16.27■□□□□ 0.19
FMR1-220ENST00000621987 PI4KAP2A4QPH2 592 aa16.26■□□□□ 0.19
FMR1-220ENST00000621987 A1BGP04217 495 aa16.26■□□□□ 0.19
FMR1-220ENST00000621987 MYL6BP14649 208 aa16.26■□□□□ 0.19
FMR1-220ENST00000621987 KSR2Q6VAB6 950 aa16.26■□□□□ 0.19
FMR1-220ENST00000621987 PI4KAP1Q8N8J0 262 aa16.26■□□□□ 0.19
FMR1-220ENST00000621987 XAGE3Q8WTP9 111 aa16.26■□□□□ 0.19
FMR1-220ENST00000621987 DNAAF4Q8WXU2 420 aa16.26■□□□□ 0.19
FMR1-220ENST00000621987 RREB1Q92766 1687 aa16.26■□□□□ 0.19
FMR1-220ENST00000621987 STARD3NLO95772 234 aa16.26■□□□□ 0.19
FMR1-220ENST00000621987 CYP19A1P11511 503 aaPredicted RBP16.26■□□□□ 0.19
FMR1-220ENST00000621987 FAM182BQ5T319 152 aa16.26■□□□□ 0.19
FMR1-220ENST00000621987 SLC4A10Q6U841 1118 aa16.26■□□□□ 0.19
FMR1-220ENST00000621987 RGS17Q9UGC6 210 aaPredicted RBP16.26■□□□□ 0.19
FMR1-220ENST00000621987 DDX58O95786 925 aaKnown RBP16.25■□□□□ 0.19
FMR1-220ENST00000621987 PIP4K2AP48426 406 aaPredicted RBP16.25■□□□□ 0.19
FMR1-220ENST00000621987 BEND3Q5T5X7 828 aa16.25■□□□□ 0.19
FMR1-220ENST00000621987 COPS6Q7L5N1 327 aa16.25■□□□□ 0.19
FMR1-220ENST00000621987 PTF1AQ7RTS3 328 aa16.25■□□□□ 0.19
FMR1-220ENST00000621987 KRT27Q7Z3Y8 459 aa16.25■□□□□ 0.19
FMR1-220ENST00000621987 COL5A3P25940 1745 aaPredicted RBP16.24■□□□□ 0.19
FMR1-220ENST00000621987 LOC102724428A0A0B4J2F2 783 aa16.24■□□□□ 0.19
FMR1-220ENST00000621987 SIK1P57059 783 aa16.24■□□□□ 0.19
FMR1-220ENST00000621987 AIMP1Q12904 312 aaKnown RBP16.24■□□□□ 0.19
FMR1-220ENST00000621987 NUP188Q5SRE5 1749 aa16.24■□□□□ 0.19
FMR1-220ENST00000621987 MAP3K2Q9Y2U5 619 aa16.24■□□□□ 0.19
FMR1-220ENST00000621987 IBTKQ9P2D0 1353 aaPredicted RBP16.23■□□□□ 0.19
FMR1-220ENST00000621987 ARFGEF2Q9Y6D5 1785 aa16.23■□□□□ 0.19
FMR1-220ENST00000621987 RXRBP28702 533 aa16.23■□□□□ 0.19
FMR1-220ENST00000621987 CENPQQ7L2Z9 268 aaPredicted RBP16.23■□□□□ 0.19
FMR1-220ENST00000621987 LY75O60449 1722 aa16.22■□□□□ 0.19
FMR1-220ENST00000621987 IGHDP01880 384 aa16.22■□□□□ 0.19
FMR1-220ENST00000621987 FAM196AQ6ZSG2 479 aa16.22■□□□□ 0.19
FMR1-220ENST00000621987 ANKRD13DQ6ZTN6 518 aa16.22■□□□□ 0.19
FMR1-220ENST00000621987 MEIS3Q99687 375 aa16.22■□□□□ 0.19
FMR1-220ENST00000621987 SRCIN1Q9C0H9 1055 aa16.22■□□□□ 0.19
FMR1-220ENST00000621987 ALDH1L1O75891 902 aa16.21■□□□□ 0.19
FMR1-220ENST00000621987 ATP6V1AP38606 617 aa16.21■□□□□ 0.19
FMR1-220ENST00000621987 HDAC1Q13547 482 aaPredicted RBP16.21■□□□□ 0.19
FMR1-220ENST00000621987 ITPK1Q13572 414 aa16.21■□□□□ 0.19
FMR1-220ENST00000621987 PLBD2Q8NHP8 589 aa16.21■□□□□ 0.19
FMR1-220ENST00000621987 BCL11BQ9C0K0 894 aaPredicted RBP16.21■□□□□ 0.19
FMR1-220ENST00000621987 RIC3Q7Z5B4 369 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms