RNA–Protein interactions for RNA: ENST00000618521.4

SH2B1-216, Transcript of SH2B adaptor protein 1, humanhuman

TSL 1 (best) BASIC

Gene SH2B1, Length 2,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B1-216ENST00000618521 NPHP3Q7Z494 1330 aa21.27■■□□□ 1
SH2B1-216ENST00000618521 RGS12O14924 1447 aa21.27■■□□□ 1
SH2B1-216ENST00000618521 IL17REQ8NFR9 667 aa21.27■■□□□ 1
SH2B1-216ENST00000618521 SLAIN2Q9P270 581 aa21.27■■□□□ 1
SH2B1-216ENST00000618521 USP26Q9BXU7 913 aa21.26■□□□□ 0.99
SH2B1-216ENST00000618521 KIF24Q5T7B8 1368 aa21.26■□□□□ 0.99
SH2B1-216ENST00000618521 GNAT3A8MTJ3 354 aa21.26■□□□□ 0.99
SH2B1-216ENST00000618521 CHL1O00533 1208 aa21.26■□□□□ 0.99
SH2B1-216ENST00000618521 LMBRD1Q9NUN5 540 aa21.26■□□□□ 0.99
SH2B1-216ENST00000618521 RGPD2P0DJD1 1756 aa21.26■□□□□ 0.99
SH2B1-216ENST00000618521 SDSP20132 328 aa21.25■□□□□ 0.99
SH2B1-216ENST00000618521 NLRP2Q9NX02 1062 aa21.25■□□□□ 0.99
SH2B1-216ENST00000618521 RABEP1Q15276 862 aa21.25■□□□□ 0.99
SH2B1-216ENST00000618521 LGR6Q9HBX8 967 aa21.25■□□□□ 0.99
SH2B1-216ENST00000618521 CBX1P83916 185 aa21.25■□□□□ 0.99
SH2B1-216ENST00000618521 RPAP2Q8IXW5 612 aaPredicted RBP21.25■□□□□ 0.99
SH2B1-216ENST00000618521 MPRIPQ6WCQ1 1025 aa21.24■□□□□ 0.99
SH2B1-216ENST00000618521 CSB-PGBD3P0DP91 1061 aa21.24■□□□□ 0.99
SH2B1-216ENST00000618521 MCM5P33992 734 aa21.24■□□□□ 0.99
SH2B1-216ENST00000618521 RTL1A6NKG5 1358 aa21.24■□□□□ 0.99
SH2B1-216ENST00000618521 PKP1Q13835 747 aa21.23■□□□□ 0.99
SH2B1-216ENST00000618521 CRB1P82279 1406 aa21.23■□□□□ 0.99
SH2B1-216ENST00000618521 TRPM3Q9HCF6 1732 aaPredicted RBP21.23■□□□□ 0.99
SH2B1-216ENST00000618521 SLC4A2P04920 1241 aa21.23■□□□□ 0.99
SH2B1-216ENST00000618521 CCDC39Q9UFE4 941 aa21.23■□□□□ 0.99
SH2B1-216ENST00000618521 ZNF530Q6P9A1 599 aaPredicted RBP21.22■□□□□ 0.99
SH2B1-216ENST00000618521 XIRP1Q702N8 1843 aaKnown RBP21.22■□□□□ 0.99
SH2B1-216ENST00000618521 PRPF40AO75400 957 aaKnown RBP21.22■□□□□ 0.99
SH2B1-216ENST00000618521 SLC4A10Q6U841 1118 aa21.22■□□□□ 0.99
SH2B1-216ENST00000618521 MED1Q15648 1581 aaPredicted RBP21.21■□□□□ 0.99
SH2B1-216ENST00000618521 HAP1P54257 671 aaPredicted RBP21.21■□□□□ 0.99
SH2B1-216ENST00000618521 DNTTIP2Q5QJE6 756 aaKnown RBP21.21■□□□□ 0.99
SH2B1-216ENST00000618521 BBXQ8WY36 941 aaPredicted RBP21.21■□□□□ 0.99
SH2B1-216ENST00000618521 F6X3S4 739 aa21.21■□□□□ 0.99
SH2B1-216ENST00000618521 RNF214Q8ND24 703 aa21.2■□□□□ 0.98
SH2B1-216ENST00000618521 GPT2Q8TD30 523 aa21.2■□□□□ 0.98
SH2B1-216ENST00000618521 TAF7LQ5H9L4 462 aa21.2■□□□□ 0.98
SH2B1-216ENST00000618521 G2E3Q7L622 706 aa21.2■□□□□ 0.98
SH2B1-216ENST00000618521 MAP3K5Q99683 1374 aa21.2■□□□□ 0.98
SH2B1-216ENST00000618521 SPATA31A3Q5VYP0 1347 aa21.19■□□□□ 0.98
SH2B1-216ENST00000618521 DCCP43146 1447 aa21.19■□□□□ 0.98
SH2B1-216ENST00000618521 SYCE3A1L190 88 aa21.19■□□□□ 0.98
SH2B1-216ENST00000618521 ZNF710Q8N1W2 664 aa21.19■□□□□ 0.98
SH2B1-216ENST00000618521 KIAA0232Q92628 1395 aa21.19■□□□□ 0.98
SH2B1-216ENST00000618521 PPP4R3BQ5MIZ7 849 aa21.18■□□□□ 0.98
SH2B1-216ENST00000618521 MYRIPQ8NFW9 859 aa21.18■□□□□ 0.98
SH2B1-216ENST00000618521 KIF1AQ12756 1690 aa21.18■□□□□ 0.98
SH2B1-216ENST00000618521 PTPRCP08575 1304 aa21.18■□□□□ 0.98
SH2B1-216ENST00000618521 PAXIP1Q6ZW49 1069 aaPredicted RBP21.18■□□□□ 0.98
SH2B1-216ENST00000618521 CHAMP1Q96JM3 812 aa21.18■□□□□ 0.98
SH2B1-216ENST00000618521 USP54Q70EL1 1684 aa21.18■□□□□ 0.98
SH2B1-216ENST00000618521 ERBB3P21860 1342 aa21.18■□□□□ 0.98
SH2B1-216ENST00000618521 FAM177BA6PVY3 158 aa21.18■□□□□ 0.98
SH2B1-216ENST00000618521 PTMAP06454 111 aaKnown RBP21.18■□□□□ 0.98
SH2B1-216ENST00000618521 SLIT3O75094 1523 aa21.17■□□□□ 0.98
SH2B1-216ENST00000618521 RGPD5Q99666 1765 aa21.17■□□□□ 0.98
SH2B1-216ENST00000618521 KCNQ3O43525 872 aa21.17■□□□□ 0.98
SH2B1-216ENST00000618521 CASC1Q6TDU7 716 aa21.17■□□□□ 0.98
SH2B1-216ENST00000618521 MPNDQ8N594 471 aa21.17■□□□□ 0.98
SH2B1-216ENST00000618521 ZGPATQ8N5A5 531 aaKnown RBP21.17■□□□□ 0.98
SH2B1-216ENST00000618521 TNS3Q68CZ2 1445 aa21.17■□□□□ 0.98
SH2B1-216ENST00000618521 NUCB2P80303 420 aa21.16■□□□□ 0.98
SH2B1-216ENST00000618521 TMEM63CQ9P1W3 806 aa21.16■□□□□ 0.98
SH2B1-216ENST00000618521 LRSAM1Q6UWE0 723 aa21.16■□□□□ 0.98
SH2B1-216ENST00000618521 KIAA2012Q0VF49 1180 aa21.15■□□□□ 0.98
SH2B1-216ENST00000618521 ATP2B3Q16720 1220 aa21.15■□□□□ 0.98
SH2B1-216ENST00000618521 TSHZ3Q63HK5 1081 aa21.15■□□□□ 0.98
SH2B1-216ENST00000618521 NSFL1CQ9UNZ2 370 aaKnown RBP21.15■□□□□ 0.98
SH2B1-216ENST00000618521 PXDNQ92626 1479 aa21.15■□□□□ 0.98
SH2B1-216ENST00000618521 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.15■□□□□ 0.98
SH2B1-216ENST00000618521 CYP2E1P05181 493 aaPredicted RBP21.14■□□□□ 0.97
SH2B1-216ENST00000618521 GTPBP4Q9BZE4 634 aaKnown RBP21.14■□□□□ 0.97
SH2B1-216ENST00000618521 PRDM11Q9NQV5 511 aa21.14■□□□□ 0.97
SH2B1-216ENST00000618521 EXOC6BQ9Y2D4 811 aa21.14■□□□□ 0.97
SH2B1-216ENST00000618521 ALS2Q96Q42 1657 aa21.14■□□□□ 0.97
SH2B1-216ENST00000618521 ST18O60284 1047 aa21.13■□□□□ 0.97
SH2B1-216ENST00000618521 GTF2E1P29083 439 aaPredicted RBP21.13■□□□□ 0.97
SH2B1-216ENST00000618521 EIF2S2P20042 333 aaKnown RBP21.13■□□□□ 0.97
SH2B1-216ENST00000618521 TAF7Q15545 349 aaPredicted RBP21.13■□□□□ 0.97
SH2B1-216ENST00000618521 PLEKHO1Q53GL0 409 aaPredicted RBP21.13■□□□□ 0.97
SH2B1-216ENST00000618521 HMMRO75330 724 aa21.12■□□□□ 0.97
SH2B1-216ENST00000618521 REC8O95072 547 aa21.12■□□□□ 0.97
SH2B1-216ENST00000618521 C1orf141Q5JVX7 400 aa21.12■□□□□ 0.97
SH2B1-216ENST00000618521 ERC2O15083 957 aa21.11■□□□□ 0.97
SH2B1-216ENST00000618521 PDE1AP54750 535 aa21.11■□□□□ 0.97
SH2B1-216ENST00000618521 KIF20AO95235 890 aa21.11■□□□□ 0.97
SH2B1-216ENST00000618521 TEFQ10587 303 aa21.11■□□□□ 0.97
SH2B1-216ENST00000618521 STRN4Q9NRL3 753 aa21.11■□□□□ 0.97
SH2B1-216ENST00000618521 RAPGEF4Q8WZA2 1011 aa21.11■□□□□ 0.97
SH2B1-216ENST00000618521 ZNF830Q96NB3 372 aaPredicted RBP21.11■□□□□ 0.97
SH2B1-216ENST00000618521 SPDYE4A6NLX3 237 aa21.1■□□□□ 0.97
SH2B1-216ENST00000618521 ANXA1P04083 346 aa21.1■□□□□ 0.97
SH2B1-216ENST00000618521 FOXD4L5Q5VV16 416 aaPredicted RBP21.1■□□□□ 0.97
SH2B1-216ENST00000618521 FOXD4L4Q8WXT5 416 aaPredicted RBP21.1■□□□□ 0.97
SH2B1-216ENST00000618521 IGSF3O75054 1194 aa21.09■□□□□ 0.97
SH2B1-216ENST00000618521 ZDHHC9Q9Y397 364 aa21.09■□□□□ 0.97
SH2B1-216ENST00000618521 LETM1O95202 739 aaPredicted RBP21.08■□□□□ 0.97
SH2B1-216ENST00000618521 CCT4P50991 539 aaKnown RBP21.08■□□□□ 0.97
SH2B1-216ENST00000618521 CWC22Q9HCG8 908 aaKnown RBP21.08■□□□□ 0.97
SH2B1-216ENST00000618521 HTATSF1O43719 755 aaKnown RBP21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms