RNA–Protein interactions for RNA: ENST00000616995.4

PRKD1-209, Transcript of protein kinase D1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD1, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-209ENST00000616995 CCDC85AQ96PX6 553 aaPredicted RBP17.6■□□□□ 0.41
PRKD1-209ENST00000616995 BOLA2Q9H3K6 86 aa17.6■□□□□ 0.41
PRKD1-209ENST00000616995 CIZ1Q9ULV3 898 aaPredicted RBP17.6■□□□□ 0.41
PRKD1-209ENST00000616995 FGD1P98174 961 aa17.6■□□□□ 0.41
PRKD1-209ENST00000616995 TCEANC2Q96MN5 208 aa17.6■□□□□ 0.41
PRKD1-209ENST00000616995 CRB1P82279 1406 aa17.6■□□□□ 0.41
PRKD1-209ENST00000616995 CHMLP26374 656 aa17.59■□□□□ 0.41
PRKD1-209ENST00000616995 NEXNQ0ZGT2 675 aa17.59■□□□□ 0.41
PRKD1-209ENST00000616995 HSPA2P54652 639 aa17.59■□□□□ 0.41
PRKD1-209ENST00000616995 SOS1Q07889 1333 aaPredicted RBP17.59■□□□□ 0.41
PRKD1-209ENST00000616995 GAS2L3Q86XJ1 694 aa17.59■□□□□ 0.41
PRKD1-209ENST00000616995 CNTROBQ8N137 903 aa17.59■□□□□ 0.41
PRKD1-209ENST00000616995 STRN4Q9NRL3 753 aa17.59■□□□□ 0.41
PRKD1-209ENST00000616995 AXIN2Q9Y2T1 843 aa17.59■□□□□ 0.41
PRKD1-209ENST00000616995 SKOR2Q2VWA4 1001 aaPredicted RBP17.59■□□□□ 0.41
PRKD1-209ENST00000616995 DBF4Q9UBU7 674 aaPredicted RBP17.59■□□□□ 0.41
PRKD1-209ENST00000616995 KIF1BPQ96EK5 621 aa17.58■□□□□ 0.41
PRKD1-209ENST00000616995 MYD88Q99836 296 aa17.58■□□□□ 0.41
PRKD1-209ENST00000616995 KAT6BQ8WYB5 2073 aa17.58■□□□□ 0.4
PRKD1-209ENST00000616995 FOSBP53539 338 aa17.58■□□□□ 0.4
PRKD1-209ENST00000616995 NDUFB9Q9Y6M9 179 aa17.58■□□□□ 0.4
PRKD1-209ENST00000616995 PTMAP06454 111 aaKnown RBP17.57■□□□□ 0.4
PRKD1-209ENST00000616995 CEP170BQ9Y4F5 1589 aaPredicted RBP17.57■□□□□ 0.4
PRKD1-209ENST00000616995 DDX58O95786 925 aaKnown RBP17.57■□□□□ 0.4
PRKD1-209ENST00000616995 NASPP49321 788 aaPredicted RBP17.57■□□□□ 0.4
PRKD1-209ENST00000616995 GPATCH3Q96I76 525 aa17.57■□□□□ 0.4
PRKD1-209ENST00000616995 RNMTO43148 476 aaKnown RBP17.56■□□□□ 0.4
PRKD1-209ENST00000616995 VPS37CA5D8V6 355 aaPredicted RBP17.56■□□□□ 0.4
PRKD1-209ENST00000616995 TATP17735 454 aaPredicted RBP17.56■□□□□ 0.4
PRKD1-209ENST00000616995 AKAP4Q5JQC9 854 aa17.56■□□□□ 0.4
PRKD1-209ENST00000616995 PRPF40BQ6NWY9 871 aaKnown RBP17.56■□□□□ 0.4
PRKD1-209ENST00000616995 NEUROD6Q96NK8 337 aa17.56■□□□□ 0.4
PRKD1-209ENST00000616995 DNAJC2Q99543 621 aaKnown RBP17.56■□□□□ 0.4
PRKD1-209ENST00000616995 ATP10DQ9P241 1426 aa17.56■□□□□ 0.4
PRKD1-209ENST00000616995 HTATSF1O43719 755 aaKnown RBP17.56■□□□□ 0.4
PRKD1-209ENST00000616995 FSD1Q9BTV5 496 aa17.56■□□□□ 0.4
PRKD1-209ENST00000616995 RRAGDQ9NQL2 400 aaPredicted RBP17.56■□□□□ 0.4
PRKD1-209ENST00000616995 PPFIA3O75145 1194 aa17.55■□□□□ 0.4
PRKD1-209ENST00000616995 CASTP20810 708 aaKnown RBP17.55■□□□□ 0.4
PRKD1-209ENST00000616995 STK3Q13188 491 aa17.55■□□□□ 0.4
PRKD1-209ENST00000616995 COPS6Q7L5N1 327 aa17.55■□□□□ 0.4
PRKD1-209ENST00000616995 SYCE3A1L190 88 aa17.55■□□□□ 0.4
PRKD1-209ENST00000616995 USP31Q70CQ4 1352 aa17.54■□□□□ 0.4
PRKD1-209ENST00000616995 XAGE3Q8WTP9 111 aa17.54■□□□□ 0.4
PRKD1-209ENST00000616995 JAKMIP1Q96N16 626 aaKnown RBP17.54■□□□□ 0.4
PRKD1-209ENST00000616995 IL25Q9H293 177 aa17.53■□□□□ 0.4
PRKD1-209ENST00000616995 TECPR2O15040 1411 aa17.53■□□□□ 0.4
PRKD1-209ENST00000616995 FIBPO43427 364 aa17.53■□□□□ 0.4
PRKD1-209ENST00000616995 AMOTQ4VCS5 1084 aa17.52■□□□□ 0.4
PRKD1-209ENST00000616995 EDC3Q96F86 508 aaKnown RBP17.52■□□□□ 0.4
PRKD1-209ENST00000616995 CABP4P57796 275 aa17.52■□□□□ 0.4
PRKD1-209ENST00000616995 UBE3BQ7Z3V4 1068 aa17.52■□□□□ 0.4
PRKD1-209ENST00000616995 HSP90AB4PQ58FF6 505 aa17.52■□□□□ 0.39
PRKD1-209ENST00000616995 CCDC83Q8IWF9 413 aa17.52■□□□□ 0.39
PRKD1-209ENST00000616995 SMC3Q9UQE7 1217 aa17.52■□□□□ 0.39
PRKD1-209ENST00000616995 TOM1L2Q6ZVM7 507 aa17.51■□□□□ 0.39
PRKD1-209ENST00000616995 FERMT3Q86UX7 667 aa17.51■□□□□ 0.39
PRKD1-209ENST00000616995 SYTL4Q96C24 671 aaPredicted RBP17.51■□□□□ 0.39
PRKD1-209ENST00000616995 RIMS1Q86UR5 1692 aaKnown RBP17.51■□□□□ 0.39
PRKD1-209ENST00000616995 AK9Q5TCS8 1911 aa17.51■□□□□ 0.39
PRKD1-209ENST00000616995 BEND3Q5T5X7 828 aa17.51■□□□□ 0.39
PRKD1-209ENST00000616995 BICC1Q9H694 974 aaKnown RBP17.51■□□□□ 0.39
PRKD1-209ENST00000616995 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.51■□□□□ 0.39
PRKD1-209ENST00000616995 RGS12O14924 1447 aa17.51■□□□□ 0.39
PRKD1-209ENST00000616995 CHMP4AQ9BY43 222 aa17.5■□□□□ 0.39
PRKD1-209ENST00000616995 NECAB1Q8N987 351 aa17.5■□□□□ 0.39
PRKD1-209ENST00000616995 CWC22Q9HCG8 908 aaKnown RBP17.5■□□□□ 0.39
PRKD1-209ENST00000616995 GIGYF1O75420 1035 aaPredicted RBP17.49■□□□□ 0.39
PRKD1-209ENST00000616995 HSP90B1P14625 803 aaKnown RBP17.49■□□□□ 0.39
PRKD1-209ENST00000616995 EVA1CP58658 441 aa17.49■□□□□ 0.39
PRKD1-209ENST00000616995 KSR2Q6VAB6 950 aa17.49■□□□□ 0.39
PRKD1-209ENST00000616995 FAM43AQ8N2R8 423 aa17.49■□□□□ 0.39
PRKD1-209ENST00000616995 PRDM11Q9NQV5 511 aa17.49■□□□□ 0.39
PRKD1-209ENST00000616995 RAB11FIP3O75154 756 aa17.49■□□□□ 0.39
PRKD1-209ENST00000616995 RUFY2Q8WXA3 655 aa17.49■□□□□ 0.39
PRKD1-209ENST00000616995 SUCLG2Q96I99 432 aa17.49■□□□□ 0.39
PRKD1-209ENST00000616995 USP16Q9Y5T5 823 aa17.49■□□□□ 0.39
PRKD1-209ENST00000616995 ZKSCAN1P17029 563 aaPredicted RBP17.49■□□□□ 0.39
PRKD1-209ENST00000616995 SSH3Q8TE77 659 aa17.49■□□□□ 0.39
PRKD1-209ENST00000616995 NRXN3Q9Y4C0 1643 aa17.49■□□□□ 0.39
PRKD1-209ENST00000616995 MSNP26038 577 aaKnown RBP17.48■□□□□ 0.39
PRKD1-209ENST00000616995 ZBTB3Q9H5J0 574 aa17.48■□□□□ 0.39
PRKD1-209ENST00000616995 KIF24Q5T7B8 1368 aa17.48■□□□□ 0.39
PRKD1-209ENST00000616995 IBTKQ9P2D0 1353 aaPredicted RBP17.48■□□□□ 0.39
PRKD1-209ENST00000616995 DLG5Q8TDM6 1919 aa17.48■□□□□ 0.39
PRKD1-209ENST00000616995 GRM8O00222 908 aa17.48■□□□□ 0.39
PRKD1-209ENST00000616995 GLRX3O76003 335 aaKnown RBP17.48■□□□□ 0.39
PRKD1-209ENST00000616995 PTMSP20962 102 aa17.48■□□□□ 0.39
PRKD1-209ENST00000616995 ARHGEF25Q86VW2 580 aa17.48■□□□□ 0.39
PRKD1-209ENST00000616995 ZNF496Q96IT1 587 aaPredicted RBP17.48■□□□□ 0.39
PRKD1-209ENST00000616995 ARID3AQ99856 593 aa17.48■□□□□ 0.39
PRKD1-209ENST00000616995 ECHDC1Q9NTX5 307 aa17.48■□□□□ 0.39
PRKD1-209ENST00000616995 ITSN1Q15811 1721 aa17.47■□□□□ 0.39
PRKD1-209ENST00000616995 ANKRD26Q9UPS8 1709 aa17.47■□□□□ 0.39
PRKD1-209ENST00000616995 FAM227BQ96M60 508 aa17.47■□□□□ 0.39
PRKD1-209ENST00000616995 RASEFQ8IZ41 740 aa17.47■□□□□ 0.39
PRKD1-209ENST00000616995 A0A087WZG4 1122 aa17.46■□□□□ 0.39
PRKD1-209ENST00000616995 GORABQ5T7V8 394 aa17.46■□□□□ 0.39
PRKD1-209ENST00000616995 FAM177BA6PVY3 158 aa17.46■□□□□ 0.39
PRKD1-209ENST00000616995 ZSCAN23Q3MJ62 389 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms