RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, human

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-223	ENST00000616179	DNAI1	Q9UI46	699 aa		18.43	■□□□□ 0.54
SYNRG-223	ENST00000616179	LRRFIP2	Q9Y608	721 aa	Known RBP	18.43	■□□□□ 0.54
SYNRG-223	ENST00000616179	CREBRF	Q8IUR6	639 aa		18.42	■□□□□ 0.54
SYNRG-223	ENST00000616179		A0A087WWV3	80 aa		18.42	■□□□□ 0.54
SYNRG-223	ENST00000616179	RAB11FIP3	O75154	756 aa		18.42	■□□□□ 0.54
SYNRG-223	ENST00000616179	TSPYL1	Q9H0U9	437 aa		18.42	■□□□□ 0.54
SYNRG-223	ENST00000616179	TRPM1	Q7Z4N2	1603 aa		18.42	■□□□□ 0.54
SYNRG-223	ENST00000616179	EIF2AK4	Q9P2K8	1649 aa	Known RBP	18.42	■□□□□ 0.54
SYNRG-223	ENST00000616179	HNRNPH2	P55795	449 aa	Known RBP	18.42	■□□□□ 0.54
SYNRG-223	ENST00000616179	NOM1	Q5C9Z4	860 aa	Known RBP	18.42	■□□□□ 0.54
SYNRG-223	ENST00000616179	ISM2	Q6H9L7	571 aa		18.42	■□□□□ 0.54
SYNRG-223	ENST00000616179	LTV1	Q96GA3	475 aa	Predicted RBP	18.42	■□□□□ 0.54
SYNRG-223	ENST00000616179	GPATCH3	Q96I76	525 aa		18.42	■□□□□ 0.54
SYNRG-223	ENST00000616179	BIN1	O00499	593 aa		18.41	■□□□□ 0.54
SYNRG-223	ENST00000616179	ANAPC15	P60006	121 aa		18.41	■□□□□ 0.54
SYNRG-223	ENST00000616179	FBXO38	Q6PIJ6	1188 aa		18.41	■□□□□ 0.54
SYNRG-223	ENST00000616179	TMC6	Q7Z403	805 aa		18.41	■□□□□ 0.54
SYNRG-223	ENST00000616179	ANKRD7	Q92527	254 aa		18.41	■□□□□ 0.54
SYNRG-223	ENST00000616179	ERCC4	Q92889	916 aa	Predicted RBP	18.41	■□□□□ 0.54
SYNRG-223	ENST00000616179	SFPQ	P23246	707 aa	Known RBP eCLIP	18.41	■□□□□ 0.54
SYNRG-223	ENST00000616179	EIF4G3	O43432	1585 aa	Known RBP	18.41	■□□□□ 0.54
SYNRG-223	ENST00000616179	CCT4	P50991	539 aa	Known RBP	18.4	■□□□□ 0.54
SYNRG-223	ENST00000616179	GTF2A1	P52655	376 aa	Predicted RBP	18.4	■□□□□ 0.54
SYNRG-223	ENST00000616179	KMT5B	Q4FZB7	885 aa		18.4	■□□□□ 0.54
SYNRG-223	ENST00000616179	CDK19	Q9BWU1	502 aa		18.4	■□□□□ 0.54
SYNRG-223	ENST00000616179	CCDC171	Q6TFL3	1326 aa		18.4	■□□□□ 0.54
SYNRG-223	ENST00000616179	SRGAP3	O43295	1099 aa		18.4	■□□□□ 0.54
SYNRG-223	ENST00000616179	ERO1A	Q96HE7	468 aa		18.4	■□□□□ 0.54
SYNRG-223	ENST00000616179	SCAND2P	Q9GZW5	306 aa	Predicted RBP	18.4	■□□□□ 0.54
SYNRG-223	ENST00000616179	NOS1	P29475	1434 aa		18.4	■□□□□ 0.54
SYNRG-223	ENST00000616179	PTPRT	O14522	1441 aa		18.4	■□□□□ 0.54
SYNRG-223	ENST00000616179	SLFN14	P0C7P3	912 aa		18.39	■□□□□ 0.54
SYNRG-223	ENST00000616179	GUCY1B3	Q02153	619 aa		18.39	■□□□□ 0.54
SYNRG-223	ENST00000616179	TAF7L	Q5H9L4	462 aa		18.39	■□□□□ 0.54
SYNRG-223	ENST00000616179	PLPPR3	Q6T4P5	718 aa		18.39	■□□□□ 0.54
SYNRG-223	ENST00000616179	UNC5CL	Q8IV45	518 aa		18.39	■□□□□ 0.53
SYNRG-223	ENST00000616179	NAT10	Q9H0A0	1025 aa	Known RBP	18.39	■□□□□ 0.53
SYNRG-223	ENST00000616179	ITSN2	Q9NZM3	1697 aa		18.39	■□□□□ 0.53
SYNRG-223	ENST00000616179	DDX19A	Q9NUU7	478 aa	Known RBP	18.39	■□□□□ 0.53
SYNRG-223	ENST00000616179	CUL4A	Q13619	759 aa		18.39	■□□□□ 0.53
SYNRG-223	ENST00000616179	CEP57L1	Q8IYX8	460 aa		18.39	■□□□□ 0.53
SYNRG-223	ENST00000616179	MSH6	P52701	1360 aa		18.38	■□□□□ 0.53
SYNRG-223	ENST00000616179	AP5Z1	O43299	807 aa		18.38	■□□□□ 0.53
SYNRG-223	ENST00000616179	SIL1	Q9H173	461 aa		18.38	■□□□□ 0.53
SYNRG-223	ENST00000616179	RASSF4	Q9H2L5	321 aa		18.38	■□□□□ 0.53
SYNRG-223	ENST00000616179	ATP10B	O94823	1461 aa		18.38	■□□□□ 0.53
SYNRG-223	ENST00000616179	BLOC1S2	Q6QNY1	142 aa		18.38	■□□□□ 0.53
SYNRG-223	ENST00000616179	PPP6R1	Q9UPN7	881 aa		18.38	■□□□□ 0.53
SYNRG-223	ENST00000616179	SYNJ2	O15056	1496 aa		18.38	■□□□□ 0.53
SYNRG-223	ENST00000616179	CLASP1	Q7Z460	1538 aa		18.38	■□□□□ 0.53
SYNRG-223	ENST00000616179	ZSCAN31	Q96LW9	406 aa	Predicted RBP	18.38	■□□□□ 0.53
SYNRG-223	ENST00000616179	G2E3	Q7L622	706 aa		18.37	■□□□□ 0.53
SYNRG-223	ENST00000616179		E9PCH4	1651 aa		18.37	■□□□□ 0.53
SYNRG-223	ENST00000616179	ABCC4	O15439	1325 aa		18.37	■□□□□ 0.53
SYNRG-223	ENST00000616179	DISP1	Q96F81	1524 aa		18.37	■□□□□ 0.53
SYNRG-223	ENST00000616179	AEBP2	Q6ZN18	517 aa	Predicted RBP	18.37	■□□□□ 0.53
SYNRG-223	ENST00000616179	USP27X	A6NNY8	438 aa		18.36	■□□□□ 0.53
SYNRG-223	ENST00000616179	HSP90B2P	Q58FF3	399 aa		18.36	■□□□□ 0.53
SYNRG-223	ENST00000616179	RNF20	Q5VTR2	975 aa		18.36	■□□□□ 0.53
SYNRG-223	ENST00000616179	TTC6	Q86TZ1	520 aa		18.36	■□□□□ 0.53
SYNRG-223	ENST00000616179	CLASRP	Q8N2M8	674 aa	Known RBP	18.36	■□□□□ 0.53
SYNRG-223	ENST00000616179	MRVI1	Q9Y6F6	885 aa		18.36	■□□□□ 0.53
SYNRG-223	ENST00000616179	ERVK-7	P63135	1459 aa		18.36	■□□□□ 0.53
SYNRG-223	ENST00000616179	SERPINC1	P01008	464 aa		18.36	■□□□□ 0.53
SYNRG-223	ENST00000616179	NME9	Q86XW9	330 aa		18.36	■□□□□ 0.53
SYNRG-223	ENST00000616179	AOPEP	Q8N6M6	819 aa		18.36	■□□□□ 0.53
SYNRG-223	ENST00000616179	SNX14	Q9Y5W7	946 aa		18.36	■□□□□ 0.53
SYNRG-223	ENST00000616179	FSD1	Q9BTV5	496 aa		18.36	■□□□□ 0.53
SYNRG-223	ENST00000616179	ZRANB1	Q9UGI0	708 aa		18.35	■□□□□ 0.53
SYNRG-223	ENST00000616179	ADGB	Q8N7X0	1667 aa		18.35	■□□□□ 0.53
SYNRG-223	ENST00000616179	CDC37L1	Q7L3B6	337 aa		18.35	■□□□□ 0.53
SYNRG-223	ENST00000616179	SYCP2	Q9BX26	1530 aa		18.35	■□□□□ 0.53
SYNRG-223	ENST00000616179	PSMA5	P28066	241 aa		18.35	■□□□□ 0.53
SYNRG-223	ENST00000616179	MCM6	Q14566	821 aa		18.35	■□□□□ 0.53
SYNRG-223	ENST00000616179	TXLNB	Q8N3L3	684 aa		18.34	■□□□□ 0.53
SYNRG-223	ENST00000616179	CCDC102A	Q96A19	550 aa		18.34	■□□□□ 0.53
SYNRG-223	ENST00000616179	SYNM	O15061	1565 aa		18.34	■□□□□ 0.53
SYNRG-223	ENST00000616179	C14orf93	Q9H972	538 aa	Known RBP	18.34	■□□□□ 0.53
SYNRG-223	ENST00000616179	POLK	Q9UBT6	870 aa		18.34	■□□□□ 0.53
SYNRG-223	ENST00000616179	SHANK2	Q9UPX8	1470 aa		18.34	■□□□□ 0.53
SYNRG-223	ENST00000616179	HSP90AA4P	Q58FG1	418 aa		18.34	■□□□□ 0.53
SYNRG-223	ENST00000616179	RUFY3	Q7L099	469 aa		18.34	■□□□□ 0.53
SYNRG-223	ENST00000616179	RASEF	Q8IZ41	740 aa		18.34	■□□□□ 0.53
SYNRG-223	ENST00000616179	C9orf78	Q9NZ63	289 aa	Predicted RBP	18.34	■□□□□ 0.53
SYNRG-223	ENST00000616179	PNMA6E	A0A0J9YXQ4	647 aa		18.34	■□□□□ 0.53
SYNRG-223	ENST00000616179	KIF2A	O00139	706 aa	Predicted RBP	18.34	■□□□□ 0.53
SYNRG-223	ENST00000616179	STK11IP	Q8N1F8	1099 aa		18.34	■□□□□ 0.53
SYNRG-223	ENST00000616179	RAD50	Q92878	1312 aa		18.33	■□□□□ 0.53
SYNRG-223	ENST00000616179	NEMF	O60524	1076 aa		18.33	■□□□□ 0.53
SYNRG-223	ENST00000616179	MTMR6	Q9Y217	621 aa		18.33	■□□□□ 0.53
SYNRG-223	ENST00000616179	MORC2	Q9Y6X9	1032 aa	Predicted RBP	18.33	■□□□□ 0.53
SYNRG-223	ENST00000616179	ZNF518A	Q6AHZ1	1483 aa		18.33	■□□□□ 0.53
SYNRG-223	ENST00000616179	CTIF	O43310	598 aa	Known RBP	18.33	■□□□□ 0.52
SYNRG-223	ENST00000616179	SH2B1	Q9NRF2	756 aa	Predicted RBP	18.33	■□□□□ 0.52
SYNRG-223	ENST00000616179	PHACTR2	O75167	634 aa		18.33	■□□□□ 0.52
SYNRG-223	ENST00000616179	NR1I2	O75469	434 aa		18.33	■□□□□ 0.52
SYNRG-223	ENST00000616179	SEC31A	O94979	1220 aa	Known RBP	18.33	■□□□□ 0.52
SYNRG-223	ENST00000616179	IBSP	P21815	317 aa	Predicted RBP	18.33	■□□□□ 0.52
SYNRG-223	ENST00000616179	CCAR1	Q8IX12	1150 aa	Known RBP	18.33	■□□□□ 0.52
SYNRG-223	ENST00000616179	DEF6	Q9H4E7	631 aa		18.33	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms