RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, humanhuman

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-223ENST00000616010 KCNQ2O43526 872 aa29.87■■■□□ 2.37
CCND3-223ENST00000616010 RGS12O14924 1447 aa29.86■■■□□ 2.37
CCND3-223ENST00000616010 NHSQ6T4R5 1651 aa29.86■■■□□ 2.37
CCND3-223ENST00000616010 API5Q9BZZ5 524 aaKnown RBP29.86■■■□□ 2.37
CCND3-223ENST00000616010 FLIIQ13045 1269 aa29.86■■■□□ 2.37
CCND3-223ENST00000616010 DBF4Q9UBU7 674 aaPredicted RBP29.86■■■□□ 2.37
CCND3-223ENST00000616010 USP16Q9Y5T5 823 aa29.86■■■□□ 2.37
CCND3-223ENST00000616010 ANXA1P04083 346 aa29.84■■■□□ 2.37
CCND3-223ENST00000616010 RBM42Q9BTD8 480 aaKnown RBP29.84■■■□□ 2.37
CCND3-223ENST00000616010 ABCC4O15439 1325 aa29.83■■■□□ 2.37
CCND3-223ENST00000616010 PROSER3Q2NL68 480 aa29.83■■■□□ 2.37
CCND3-223ENST00000616010 TMEM57Q8N5G2 664 aa29.83■■■□□ 2.37
CCND3-223ENST00000616010 PHAXQ9H814 394 aaKnown RBP29.83■■■□□ 2.37
CCND3-223ENST00000616010 PPP4R2Q9NY27 417 aa29.83■■■□□ 2.37
CCND3-223ENST00000616010 SBF2Q86WG5 1849 aa29.82■■■□□ 2.36
CCND3-223ENST00000616010 MVPQ14764 893 aaKnown RBP29.82■■■□□ 2.36
CCND3-223ENST00000616010 RGS17Q9UGC6 210 aaPredicted RBP29.82■■■□□ 2.36
CCND3-223ENST00000616010 FKBP5Q13451 457 aaPredicted RBP29.81■■■□□ 2.36
CCND3-223ENST00000616010 ITPRIPQ8IWB1 547 aa29.81■■■□□ 2.36
CCND3-223ENST00000616010 VSIG10Q8N0Z9 540 aa29.8■■■□□ 2.36
CCND3-223ENST00000616010 DDX21Q9NR30 783 aaKnown RBP eCLIP29.8■■■□□ 2.36
CCND3-223ENST00000616010 BTAF1O14981 1849 aa29.8■■■□□ 2.36
CCND3-223ENST00000616010 RXRBP28702 533 aa29.79■■■□□ 2.36
CCND3-223ENST00000616010 PDIA6Q15084 440 aa29.79■■■□□ 2.36
CCND3-223ENST00000616010 KRT27Q7Z3Y8 459 aa29.79■■■□□ 2.36
CCND3-223ENST00000616010 PALLDQ8WX93 1383 aa29.78■■■□□ 2.36
CCND3-223ENST00000616010 TJP1Q07157 1748 aa29.78■■■□□ 2.36
CCND3-223ENST00000616010 HYPKQ9NX55 129 aa29.78■■■□□ 2.36
CCND3-223ENST00000616010 MYL6BP14649 208 aa29.77■■■□□ 2.36
CCND3-223ENST00000616010 PTF1AQ7RTS3 328 aa29.77■■■□□ 2.36
CCND3-223ENST00000616010 SLC4A9Q96Q91 983 aa29.77■■■□□ 2.36
CCND3-223ENST00000616010 F6X3S4 739 aa29.76■■■□□ 2.36
CCND3-223ENST00000616010 PIP4K2AP48426 406 aaPredicted RBP29.76■■■□□ 2.36
CCND3-223ENST00000616010 DNAJC10Q8IXB1 793 aa29.76■■■□□ 2.36
CCND3-223ENST00000616010 POTEAQ6S8J7 498 aa29.74■■■□□ 2.35
CCND3-223ENST00000616010 SMARCC1Q92922 1105 aaPredicted RBP29.74■■■□□ 2.35
CCND3-223ENST00000616010 TEX13AQ9BXU3 409 aaPredicted RBP29.74■■■□□ 2.35
CCND3-223ENST00000616010 DDX19BQ9UMR2 479 aa29.74■■■□□ 2.35
CCND3-223ENST00000616010 EP400Q96L91 3159 aa29.74■■■□□ 2.35
CCND3-223ENST00000616010 ERBB4Q15303 1308 aa29.74■■■□□ 2.35
CCND3-223ENST00000616010 B4GALNT3Q6L9W6 998 aa29.73■■■□□ 2.35
CCND3-223ENST00000616010 SLC4A10Q6U841 1118 aa29.72■■■□□ 2.35
CCND3-223ENST00000616010 CICQ96RK0 1608 aaPredicted RBP29.72■■■□□ 2.35
CCND3-223ENST00000616010 N4BP2Q86UW6 1770 aaPredicted RBP29.71■■■□□ 2.35
CCND3-223ENST00000616010 LOC102724428A0A0B4J2F2 783 aa29.71■■■□□ 2.35
CCND3-223ENST00000616010 A1BGP04217 495 aa29.71■■■□□ 2.35
CCND3-223ENST00000616010 SIK1P57059 783 aa29.71■■■□□ 2.35
CCND3-223ENST00000616010 FAM196AQ6ZSG2 479 aa29.71■■■□□ 2.35
CCND3-223ENST00000616010 LRP10Q7Z4F1 713 aa29.71■■■□□ 2.35
CCND3-223ENST00000616010 CCDC136Q96JN2 1154 aa29.71■■■□□ 2.35
CCND3-223ENST00000616010 PXDNLA1KZ92 1463 aa29.71■■■□□ 2.35
CCND3-223ENST00000616010 NBPF26B4DH59 902 aa29.7■■■□□ 2.34
CCND3-223ENST00000616010 STARD3NLO95772 234 aa29.7■■■□□ 2.34
CCND3-223ENST00000616010 AIMP1Q12904 312 aaKnown RBP29.7■■■□□ 2.34
CCND3-223ENST00000616010 NBPF14Q5TI25 921 aa29.7■■■□□ 2.34
CCND3-223ENST00000616010 INTS3Q68E01 1043 aaKnown RBP29.7■■■□□ 2.34
CCND3-223ENST00000616010 NBPF10Q6P3W6 841 aaKnown RBP29.7■■■□□ 2.34
CCND3-223ENST00000616010 NBPF15Q8N660 670 aa29.7■■■□□ 2.34
CCND3-223ENST00000616010 ADCY9O60503 1353 aa29.69■■■□□ 2.34
CCND3-223ENST00000616010 ATP6V1AP38606 617 aa29.69■■■□□ 2.34
CCND3-223ENST00000616010 PI4KAP2A4QPH2 592 aa29.68■■■□□ 2.34
CCND3-223ENST00000616010 PI4KAP1Q8N8J0 262 aa29.68■■■□□ 2.34
CCND3-223ENST00000616010 XAGE3Q8WTP9 111 aa29.68■■■□□ 2.34
CCND3-223ENST00000616010 ZNF831Q5JPB2 1677 aa29.67■■■□□ 2.34
CCND3-223ENST00000616010 CYP19A1P11511 503 aaPredicted RBP29.66■■■□□ 2.34
CCND3-223ENST00000616010 COPS6Q7L5N1 327 aa29.66■■■□□ 2.34
CCND3-223ENST00000616010 DDX58O95786 925 aaKnown RBP29.66■■■□□ 2.34
CCND3-223ENST00000616010 CCT4P50991 539 aaKnown RBP29.66■■■□□ 2.34
CCND3-223ENST00000616010 BCL11BQ9C0K0 894 aaPredicted RBP29.66■■■□□ 2.34
CCND3-223ENST00000616010 AAMPQ13685 434 aa29.65■■■□□ 2.34
CCND3-223ENST00000616010 DNAAF4Q8WXU2 420 aa29.65■■■□□ 2.34
CCND3-223ENST00000616010 COL5A3P25940 1745 aaPredicted RBP29.64■■■□□ 2.34
CCND3-223ENST00000616010 ITPK1Q13572 414 aa29.64■■■□□ 2.33
CCND3-223ENST00000616010 KSR2Q6VAB6 950 aa29.64■■■□□ 2.33
CCND3-223ENST00000616010 MAP3K2Q9Y2U5 619 aa29.64■■■□□ 2.33
CCND3-223ENST00000616010 LY75O60449 1722 aa29.63■■■□□ 2.33
CCND3-223ENST00000616010 ZBTB7BO15156 539 aaPredicted RBP29.62■■■□□ 2.33
CCND3-223ENST00000616010 ZBTB40Q9NUA8 1239 aa29.62■■■□□ 2.33
CCND3-223ENST00000616010 ARFGEF2Q9Y6D5 1785 aa29.61■■■□□ 2.33
CCND3-223ENST00000616010 CHMP4BQ9H444 224 aaKnown RBP29.61■■■□□ 2.33
CCND3-223ENST00000616010 ZNF330Q9Y3S2 320 aaPredicted RBP29.61■■■□□ 2.33
CCND3-223ENST00000616010 TRIM37O94972 964 aa29.61■■■□□ 2.33
CCND3-223ENST00000616010 ZBTB1Q9Y2K1 713 aa29.61■■■□□ 2.33
CCND3-223ENST00000616010 RIC3Q7Z5B4 369 aa29.6■■■□□ 2.33
CCND3-223ENST00000616010 RREB1Q92766 1687 aa29.59■■■□□ 2.33
CCND3-223ENST00000616010 ATP10DQ9P241 1426 aa29.59■■■□□ 2.33
CCND3-223ENST00000616010 ILDR1Q86SU0 546 aaPredicted RBP29.59■■■□□ 2.33
CCND3-223ENST00000616010 ANKRD13DQ6ZTN6 518 aa29.58■■■□□ 2.33
CCND3-223ENST00000616010 NUP188Q5SRE5 1749 aa29.58■■■□□ 2.33
CCND3-223ENST00000616010 CRKLP46109 303 aaKnown RBP29.57■■■□□ 2.32
CCND3-223ENST00000616010 KCNQ4P56696 695 aa29.57■■■□□ 2.32
CCND3-223ENST00000616010 TTLL7Q6ZT98 887 aa29.57■■■□□ 2.32
CCND3-223ENST00000616010 SRCIN1Q9C0H9 1055 aa29.57■■■□□ 2.32
CCND3-223ENST00000616010 BEND3Q5T5X7 828 aa29.57■■■□□ 2.32
CCND3-223ENST00000616010 MYH14Q7Z406 1995 aaKnown RBP29.57■■■□□ 2.32
CCND3-223ENST00000616010 MEIS3Q99687 375 aa29.56■■■□□ 2.32
CCND3-223ENST00000616010 CCDC87Q9NVE4 849 aa29.56■■■□□ 2.32
CCND3-223ENST00000616010 PCDHB15Q9Y5E8 787 aa29.56■■■□□ 2.32
CCND3-223ENST00000616010 CCNL1Q9UK58 526 aaPredicted RBP29.55■■■□□ 2.32
CCND3-223ENST00000616010 LINC00116Q8NCU8 138 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms