RNA–Protein interactions for RNA: ENST00000615951.4

CDK11B-206, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,227 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-206ENST00000615951 SRCIN1Q9C0H9 1055 aa23.14■■□□□ 1.3
CDK11B-206ENST00000615951 USP44Q9H0E7 712 aa23.14■■□□□ 1.3
CDK11B-206ENST00000615951 MRC1P22897 1456 aa23.14■■□□□ 1.3
CDK11B-206ENST00000615951 SOS2Q07890 1332 aaPredicted RBP23.14■■□□□ 1.29
CDK11B-206ENST00000615951 KDM6AO15550 1401 aaPredicted RBP23.13■■□□□ 1.29
CDK11B-206ENST00000615951 GSPT1P15170 499 aaKnown RBP23.13■■□□□ 1.29
CDK11B-206ENST00000615951 PHKG2P15735 406 aa23.13■■□□□ 1.29
CDK11B-206ENST00000615951 CABLES1Q8TDN4 633 aa23.13■■□□□ 1.29
CDK11B-206ENST00000615951 ESPNB1AK53 854 aa23.13■■□□□ 1.29
CDK11B-206ENST00000615951 TBC1D9Q6ZT07 1266 aa23.13■■□□□ 1.29
CDK11B-206ENST00000615951 SMAP1Q8IYB5 467 aaPredicted RBP23.13■■□□□ 1.29
CDK11B-206ENST00000615951 UBTFL1P0CB47 393 aaPredicted RBP23.12■■□□□ 1.29
CDK11B-206ENST00000615951 CSB-PGBD3P0DP91 1061 aa23.12■■□□□ 1.29
CDK11B-206ENST00000615951 DNAAF4Q8WXU2 420 aa23.12■■□□□ 1.29
CDK11B-206ENST00000615951 OSBPL3Q9H4L5 887 aa23.12■■□□□ 1.29
CDK11B-206ENST00000615951 IFNL2Q8IZJ0 200 aa23.12■■□□□ 1.29
CDK11B-206ENST00000615951 SLC52A2Q9HAB3 445 aa23.11■■□□□ 1.29
CDK11B-206ENST00000615951 NAP1L2Q9ULW6 460 aaPredicted RBP23.11■■□□□ 1.29
CDK11B-206ENST00000615951 BEND3Q5T5X7 828 aa23.1■■□□□ 1.29
CDK11B-206ENST00000615951 C16orf71Q8IYS4 520 aaPredicted RBP23.1■■□□□ 1.29
CDK11B-206ENST00000615951 TBC1D2Q9BYX2 928 aa23.1■■□□□ 1.29
CDK11B-206ENST00000615951 SLAIN2Q9P270 581 aa23.1■■□□□ 1.29
CDK11B-206ENST00000615951 PARP4Q9UKK3 1724 aaKnown RBP23.1■■□□□ 1.29
CDK11B-206ENST00000615951 GTF2E1P29083 439 aaPredicted RBP23.1■■□□□ 1.29
CDK11B-206ENST00000615951 MAP7D2Q96T17 732 aa23.1■■□□□ 1.29
CDK11B-206ENST00000615951 LRRFIP2Q9Y608 721 aaKnown RBP23.1■■□□□ 1.29
CDK11B-206ENST00000615951 HYPKQ9NX55 129 aa23.09■■□□□ 1.29
CDK11B-206ENST00000615951 ADCY9O60503 1353 aa23.09■■□□□ 1.29
CDK11B-206ENST00000615951 IBTKQ9P2D0 1353 aaPredicted RBP23.09■■□□□ 1.29
CDK11B-206ENST00000615951 HSP90AB1P08238 724 aaKnown RBP23.09■■□□□ 1.29
CDK11B-206ENST00000615951 CHRNA2Q15822 529 aa23.09■■□□□ 1.29
CDK11B-206ENST00000615951 PANK2Q9BZ23 570 aa23.09■■□□□ 1.29
CDK11B-206ENST00000615951 SMARCA5O60264 1052 aaPredicted RBP23.08■■□□□ 1.29
CDK11B-206ENST00000615951 ZNF335Q9H4Z2 1342 aaPredicted RBP23.08■■□□□ 1.28
CDK11B-206ENST00000615951 PI4KAP2A4QPH2 592 aa23.08■■□□□ 1.28
CDK11B-206ENST00000615951 PI4KAP1Q8N8J0 262 aa23.08■■□□□ 1.28
CDK11B-206ENST00000615951 SSH3Q8TE77 659 aa23.08■■□□□ 1.28
CDK11B-206ENST00000615951 DCAF5Q96JK2 942 aa23.08■■□□□ 1.28
CDK11B-206ENST00000615951 ABCA3Q99758 1704 aa23.07■■□□□ 1.28
CDK11B-206ENST00000615951 PNMA6EA0A0J9YXQ4 647 aa23.07■■□□□ 1.28
CDK11B-206ENST00000615951 ALDH1L1O75891 902 aa23.06■■□□□ 1.28
CDK11B-206ENST00000615951 ZNF790Q6PG37 636 aa23.06■■□□□ 1.28
CDK11B-206ENST00000615951 OTUD7AQ8TE49 926 aaPredicted RBP23.06■■□□□ 1.28
CDK11B-206ENST00000615951 LRRCC1Q9C099 1032 aa23.06■■□□□ 1.28
CDK11B-206ENST00000615951 POLA2Q14181 598 aa23.06■■□□□ 1.28
CDK11B-206ENST00000615951 DDX21Q9NR30 783 aaKnown RBP eCLIP23.06■■□□□ 1.28
CDK11B-206ENST00000615951 SALL3Q9BXA9 1300 aa23.05■■□□□ 1.28
CDK11B-206ENST00000615951 KSR2Q6VAB6 950 aa23.05■■□□□ 1.28
CDK11B-206ENST00000615951 NHSL1Q5SYE7 1610 aa23.05■■□□□ 1.28
CDK11B-206ENST00000615951 SNX21Q969T3 373 aa23.05■■□□□ 1.28
CDK11B-206ENST00000615951 WDR17Q8IZU2 1322 aa23.04■■□□□ 1.28
CDK11B-206ENST00000615951 HDAC5Q9UQL6 1122 aa23.04■■□□□ 1.28
CDK11B-206ENST00000615951 C5P01031 1676 aa23.04■■□□□ 1.28
CDK11B-206ENST00000615951 RAB11FIP3O75154 756 aa23.04■■□□□ 1.28
CDK11B-206ENST00000615951 PDE1AP54750 535 aa23.04■■□□□ 1.28
CDK11B-206ENST00000615951 EXOC6BQ9Y2D4 811 aa23.04■■□□□ 1.28
CDK11B-206ENST00000615951 APBB1O00213 710 aa23.03■■□□□ 1.28
CDK11B-206ENST00000615951 CYP27B1O15528 508 aa23.03■■□□□ 1.28
CDK11B-206ENST00000615951 SDSP20132 328 aa23.03■■□□□ 1.28
CDK11B-206ENST00000615951 ERBB4Q15303 1308 aa23.03■■□□□ 1.28
CDK11B-206ENST00000615951 NCLP19338 710 aaKnown RBP23.02■■□□□ 1.28
CDK11B-206ENST00000615951 CASC1Q6TDU7 716 aa23.02■■□□□ 1.28
CDK11B-206ENST00000615951 DDX58O95786 925 aaKnown RBP23.02■■□□□ 1.28
CDK11B-206ENST00000615951 ANTXR1Q9H6X2 564 aa23.02■■□□□ 1.28
CDK11B-206ENST00000615951 PRDM11Q9NQV5 511 aa23.02■■□□□ 1.28
CDK11B-206ENST00000615951 AOX1Q06278 1338 aa23.02■■□□□ 1.28
CDK11B-206ENST00000615951 ANXA1P04083 346 aa23.01■■□□□ 1.27
CDK11B-206ENST00000615951 STAP2Q9UGK3 403 aa23.01■■□□□ 1.27
CDK11B-206ENST00000615951 TUBGCP6Q96RT7 1819 aa23.01■■□□□ 1.27
CDK11B-206ENST00000615951 COL5A2P05997 1499 aaPredicted RBP23.01■■□□□ 1.27
CDK11B-206ENST00000615951 PROSER3Q2NL68 480 aa23.01■■□□□ 1.27
CDK11B-206ENST00000615951 NFATC2IPQ8NCF5 419 aa23.01■■□□□ 1.27
CDK11B-206ENST00000615951 MAP3K2Q9Y2U5 619 aa23.01■■□□□ 1.27
CDK11B-206ENST00000615951 MRE11P49959 708 aa23■■□□□ 1.27
CDK11B-206ENST00000615951 MTX1Q13505 466 aa23■■□□□ 1.27
CDK11B-206ENST00000615951 PDIA6Q15084 440 aa23■■□□□ 1.27
CDK11B-206ENST00000615951 KIAA1211Q6ZU35 1233 aa23■■□□□ 1.27
CDK11B-206ENST00000615951 PPP1R42Q7Z4L9 355 aa23■■□□□ 1.27
CDK11B-206ENST00000615951 HSCBQ8IWL3 235 aa23■■□□□ 1.27
CDK11B-206ENST00000615951 ARXQ96QS3 562 aa23■■□□□ 1.27
CDK11B-206ENST00000615951 PRAMEF22A3QJZ6 481 aa22.99■■□□□ 1.27
CDK11B-206ENST00000615951 NBPF7P0C2Y1 421 aaPredicted RBP22.98■■□□□ 1.27
CDK11B-206ENST00000615951 KIF2CQ99661 725 aa22.98■■□□□ 1.27
CDK11B-206ENST00000615951 LINS1Q8NG48 757 aa22.98■■□□□ 1.27
CDK11B-206ENST00000615951 IPO4Q8TEX9 1081 aaKnown RBP22.98■■□□□ 1.27
CDK11B-206ENST00000615951 MX1P20591 662 aa22.97■■□□□ 1.27
CDK11B-206ENST00000615951 SLC39A6Q13433 755 aa22.97■■□□□ 1.27
CDK11B-206ENST00000615951 HSP90AB4PQ58FF6 505 aa22.97■■□□□ 1.27
CDK11B-206ENST00000615951 UTP14CQ5TAP6 766 aaKnown RBP22.97■■□□□ 1.27
CDK11B-206ENST00000615951 UTYO14607 1347 aa22.97■■□□□ 1.27
CDK11B-206ENST00000615951 SNRPA1P09661 255 aaKnown RBP22.97■■□□□ 1.27
CDK11B-206ENST00000615951 TERF1P54274 439 aa22.97■■□□□ 1.27
CDK11B-206ENST00000615951 PCDH11XQ9BZA7 1347 aa22.97■■□□□ 1.27
CDK11B-206ENST00000615951 PCDH11YQ9BZA8 1340 aa22.97■■□□□ 1.27
CDK11B-206ENST00000615951 CARD10Q9BWT7 1032 aa22.96■■□□□ 1.27
CDK11B-206ENST00000615951 LAMB4A4D0S4 1761 aa22.96■■□□□ 1.27
CDK11B-206ENST00000615951 TTC5Q8N0Z6 440 aa22.96■■□□□ 1.27
CDK11B-206ENST00000615951 FMNL2Q96PY5 1086 aa22.96■■□□□ 1.27
CDK11B-206ENST00000615951 ZNF496Q96IT1 587 aaPredicted RBP22.95■■□□□ 1.26
CDK11B-206ENST00000615951 SRGAP3O43295 1099 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms