RNA–Protein interactions for RNA: ENST00000615234.4

POLR2E-213, Transcript of RNA polymerase II subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2E, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-213ENST00000615234 HOXB7P09629 217 aa18.06■□□□□ 0.48
POLR2E-213ENST00000615234 NBPF7P0C2Y1 421 aaPredicted RBP18.06■□□□□ 0.48
POLR2E-213ENST00000615234 CAVIN1Q6NZI2 390 aaKnown RBP18.06■□□□□ 0.48
POLR2E-213ENST00000615234 ERBB4Q15303 1308 aa18.06■□□□□ 0.48
POLR2E-213ENST00000615234 PRPF40AO75400 957 aaKnown RBP18.06■□□□□ 0.48
POLR2E-213ENST00000615234 BEND3Q5T5X7 828 aa18.06■□□□□ 0.48
POLR2E-213ENST00000615234 RHPN1Q8TCX5 695 aa18.06■□□□□ 0.48
POLR2E-213ENST00000615234 RGPD2P0DJD1 1756 aa18.06■□□□□ 0.48
POLR2E-213ENST00000615234 NCLP19338 710 aaKnown RBP18.05■□□□□ 0.48
POLR2E-213ENST00000615234 CHAMP1Q96JM3 812 aa18.05■□□□□ 0.48
POLR2E-213ENST00000615234 SRGAP3O43295 1099 aa18.05■□□□□ 0.48
POLR2E-213ENST00000615234 ZSCAN23Q3MJ62 389 aa18.05■□□□□ 0.48
POLR2E-213ENST00000615234 PI4K2BQ8TCG2 481 aa18.05■□□□□ 0.48
POLR2E-213ENST00000615234 PI4KAP2A4QPH2 592 aa18.04■□□□□ 0.48
POLR2E-213ENST00000615234 ESPNB1AK53 854 aa18.04■□□□□ 0.48
POLR2E-213ENST00000615234 NASPP49321 788 aaPredicted RBP18.04■□□□□ 0.48
POLR2E-213ENST00000615234 PI4KAP1Q8N8J0 262 aa18.04■□□□□ 0.48
POLR2E-213ENST00000615234 GPT2Q8TD30 523 aa18.04■□□□□ 0.48
POLR2E-213ENST00000615234 DNAAF4Q8WXU2 420 aa18.04■□□□□ 0.48
POLR2E-213ENST00000615234 LMO7Q8WWI1 1683 aa18.04■□□□□ 0.48
POLR2E-213ENST00000615234 LRRC59Q96AG4 307 aaKnown RBP18.04■□□□□ 0.48
POLR2E-213ENST00000615234 ZBTB7CA1YPR0 619 aa18.03■□□□□ 0.48
POLR2E-213ENST00000615234 PSME1Q06323 249 aa18.03■□□□□ 0.48
POLR2E-213ENST00000615234 TRIM44Q96DX7 344 aaPredicted RBP18.03■□□□□ 0.48
POLR2E-213ENST00000615234 EPB41L2O43491 1005 aaKnown RBP18.03■□□□□ 0.48
POLR2E-213ENST00000615234 ANXA1P04083 346 aa18.03■□□□□ 0.48
POLR2E-213ENST00000615234 ESCO1Q5FWF5 840 aa18.03■□□□□ 0.48
POLR2E-213ENST00000615234 AKAP4Q5JQC9 854 aa18.03■□□□□ 0.48
POLR2E-213ENST00000615234 KCNH5Q8NCM2 988 aa18.03■□□□□ 0.48
POLR2E-213ENST00000615234 KIF1BPQ96EK5 621 aa18.03■□□□□ 0.48
POLR2E-213ENST00000615234 PPP1R9BQ96SB3 815 aa18.03■□□□□ 0.48
POLR2E-213ENST00000615234 PHRF1Q9P1Y6 1649 aaKnown RBP18.02■□□□□ 0.48
POLR2E-213ENST00000615234 BRD1O95696 1058 aa18.02■□□□□ 0.48
POLR2E-213ENST00000615234 MAP4K4O95819 1239 aaPredicted RBP18.02■□□□□ 0.48
POLR2E-213ENST00000615234 ZNF530Q6P9A1 599 aaPredicted RBP18.02■□□□□ 0.48
POLR2E-213ENST00000615234 INTS4Q96HW7 963 aaKnown RBP18.02■□□□□ 0.48
POLR2E-213ENST00000615234 UPF3BQ9BZI7 483 aaKnown RBP18.02■□□□□ 0.48
POLR2E-213ENST00000615234 ZNF142P52746 1687 aaPredicted RBP18.02■□□□□ 0.48
POLR2E-213ENST00000615234 BTBD11A6QL63 1104 aa18.02■□□□□ 0.47
POLR2E-213ENST00000615234 HSPA4P34932 840 aa18.02■□□□□ 0.47
POLR2E-213ENST00000615234 CCDC173Q0VFZ6 552 aa18.02■□□□□ 0.47
POLR2E-213ENST00000615234 TEFQ10587 303 aa18.02■□□□□ 0.47
POLR2E-213ENST00000615234 FOXD4L5Q5VV16 416 aaPredicted RBP18.02■□□□□ 0.47
POLR2E-213ENST00000615234 MPRIPQ6WCQ1 1025 aa18.02■□□□□ 0.47
POLR2E-213ENST00000615234 NOL8Q76FK4 1167 aaKnown RBP18.02■□□□□ 0.47
POLR2E-213ENST00000615234 FOXD4L4Q8WXT5 416 aaPredicted RBP18.02■□□□□ 0.47
POLR2E-213ENST00000615234 ADCY9O60503 1353 aa18.02■□□□□ 0.47
POLR2E-213ENST00000615234 CHMP4AQ9BY43 222 aa18.01■□□□□ 0.47
POLR2E-213ENST00000615234 RBM27Q9P2N5 1060 aaKnown RBP18■□□□□ 0.47
POLR2E-213ENST00000615234 PLEKHO1Q53GL0 409 aaPredicted RBP18■□□□□ 0.47
POLR2E-213ENST00000615234 ADGRL3Q9HAR2 1447 aa18■□□□□ 0.47
POLR2E-213ENST00000615234 SGSM2O43147 1006 aa17.99■□□□□ 0.47
POLR2E-213ENST00000615234 NSFL1CQ9UNZ2 370 aaKnown RBP17.99■□□□□ 0.47
POLR2E-213ENST00000615234 PXDNQ92626 1479 aa17.99■□□□□ 0.47
POLR2E-213ENST00000615234 RNMTO43148 476 aaKnown RBP17.98■□□□□ 0.47
POLR2E-213ENST00000615234 RAD50Q92878 1312 aa17.98■□□□□ 0.47
POLR2E-213ENST00000615234 PRIM1P49642 420 aaKnown RBP17.98■□□□□ 0.47
POLR2E-213ENST00000615234 AMOTQ4VCS5 1084 aa17.98■□□□□ 0.47
POLR2E-213ENST00000615234 RBSNQ9H1K0 784 aa17.98■□□□□ 0.47
POLR2E-213ENST00000615234 TMEM63CQ9P1W3 806 aa17.98■□□□□ 0.47
POLR2E-213ENST00000615234 DBF4Q9UBU7 674 aaPredicted RBP17.98■□□□□ 0.47
POLR2E-213ENST00000615234 NCAPD2Q15021 1401 aa17.97■□□□□ 0.47
POLR2E-213ENST00000615234 HSP90AB4PQ58FF6 505 aa17.97■□□□□ 0.47
POLR2E-213ENST00000615234 USP42Q9H9J4 1324 aaKnown RBP17.97■□□□□ 0.47
POLR2E-213ENST00000615234 GCP02774 474 aa17.97■□□□□ 0.47
POLR2E-213ENST00000615234 MTX1Q13505 466 aa17.97■□□□□ 0.47
POLR2E-213ENST00000615234 ARHGEF25Q86VW2 580 aa17.97■□□□□ 0.47
POLR2E-213ENST00000615234 CNTROBQ8N137 903 aa17.97■□□□□ 0.47
POLR2E-213ENST00000615234 LSG1Q9H089 658 aaKnown RBP17.97■□□□□ 0.47
POLR2E-213ENST00000615234 CRYBG1Q9Y4K1 1723 aa17.97■□□□□ 0.47
POLR2E-213ENST00000615234 PROSER3Q2NL68 480 aa17.96■□□□□ 0.47
POLR2E-213ENST00000615234 ANP32BQ92688 251 aaKnown RBP17.96■□□□□ 0.47
POLR2E-213ENST00000615234 NPHP4O75161 1426 aaPredicted RBP17.95■□□□□ 0.46
POLR2E-213ENST00000615234 GIGYF1O75420 1035 aaPredicted RBP17.95■□□□□ 0.46
POLR2E-213ENST00000615234 HEG1Q9ULI3 1381 aa17.95■□□□□ 0.46
POLR2E-213ENST00000615234 MAP3K2Q9Y2U5 619 aa17.95■□□□□ 0.46
POLR2E-213ENST00000615234 SNX14Q9Y5W7 946 aa17.95■□□□□ 0.46
POLR2E-213ENST00000615234 PLEKHG5O94827 1062 aa17.95■□□□□ 0.46
POLR2E-213ENST00000615234 TTC41PQ6P2S7 1318 aa17.95■□□□□ 0.46
POLR2E-213ENST00000615234 C1orf141Q5JVX7 400 aa17.94■□□□□ 0.46
POLR2E-213ENST00000615234 ORAI2Q96SN7 254 aa17.94■□□□□ 0.46
POLR2E-213ENST00000615234 SLIT3O75094 1523 aa17.94■□□□□ 0.46
POLR2E-213ENST00000615234 OVOS2A0A0G2JMS6 1433 aa17.94■□□□□ 0.46
POLR2E-213ENST00000615234 XPCQ01831 940 aaPredicted RBP17.94■□□□□ 0.46
POLR2E-213ENST00000615234 ALDH1L1O75891 902 aa17.94■□□□□ 0.46
POLR2E-213ENST00000615234 MBD3O95983 291 aa17.94■□□□□ 0.46
POLR2E-213ENST00000615234 RASEFQ8IZ41 740 aa17.94■□□□□ 0.46
POLR2E-213ENST00000615234 PRAMEF22A3QJZ6 481 aa17.93■□□□□ 0.46
POLR2E-213ENST00000615234 GLRX3O76003 335 aaKnown RBP17.93■□□□□ 0.46
POLR2E-213ENST00000615234 OS9Q13438 667 aaPredicted RBP17.93■□□□□ 0.46
POLR2E-213ENST00000615234 LRSAM1Q6UWE0 723 aa17.93■□□□□ 0.46
POLR2E-213ENST00000615234 CWC27Q6UX04 472 aaKnown RBP17.93■□□□□ 0.46
POLR2E-213ENST00000615234 KSR2Q6VAB6 950 aa17.93■□□□□ 0.46
POLR2E-213ENST00000615234 ANKRD24Q8TF21 1146 aa17.93■□□□□ 0.46
POLR2E-213ENST00000615234 TTC14Q96N46 770 aa17.93■□□□□ 0.46
POLR2E-213ENST00000615234 C9orf78Q9NZ63 289 aaPredicted RBP17.93■□□□□ 0.46
POLR2E-213ENST00000615234 SYCE3A1L190 88 aa17.92■□□□□ 0.46
POLR2E-213ENST00000615234 NAP1L5Q96NT1 182 aaPredicted RBP17.92■□□□□ 0.46
POLR2E-213ENST00000615234 CWF19L2Q2TBE0 894 aaKnown RBP17.92■□□□□ 0.46
POLR2E-213ENST00000615234 CLASRPQ8N2M8 674 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms