RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 KRT18P05783 430 aaKnown RBP11.55□□□□□ -0.56
TNFRSF9-204ENST00000615230 RABEP1Q15276 862 aa11.55□□□□□ -0.56
TNFRSF9-204ENST00000615230 MCM10Q7L590 875 aa11.55□□□□□ -0.56
TNFRSF9-204ENST00000615230 BICD2Q8TD16 824 aa11.55□□□□□ -0.56
TNFRSF9-204ENST00000615230 TRPC5Q9UL62 973 aaPredicted RBP11.55□□□□□ -0.56
TNFRSF9-204ENST00000615230 SBNO1A3KN83 1393 aa11.55□□□□□ -0.56
TNFRSF9-204ENST00000615230 MAP3K5Q99683 1374 aa11.55□□□□□ -0.56
TNFRSF9-204ENST00000615230 CCDC196A0A1B0GTZ2 297 aa11.55□□□□□ -0.56
TNFRSF9-204ENST00000615230 GLRX3O76003 335 aaKnown RBP11.55□□□□□ -0.56
TNFRSF9-204ENST00000615230 ZNF76P36508 570 aa11.55□□□□□ -0.56
TNFRSF9-204ENST00000615230 BTG4Q9NY30 223 aa11.55□□□□□ -0.56
TNFRSF9-204ENST00000615230 PLEKHH1Q9ULM0 1364 aa11.55□□□□□ -0.56
TNFRSF9-204ENST00000615230 HMGB1P09429 215 aaKnown RBP11.54□□□□□ -0.56
TNFRSF9-204ENST00000615230 DESP17661 470 aa11.54□□□□□ -0.56
TNFRSF9-204ENST00000615230 DACH1Q9UI36 760 aa11.54□□□□□ -0.56
TNFRSF9-204ENST00000615230 CEP131Q9UPN4 1083 aa11.54□□□□□ -0.56
TNFRSF9-204ENST00000615230 PDE6BP35913 854 aa11.54□□□□□ -0.56
TNFRSF9-204ENST00000615230 TNNI2P48788 182 aa11.54□□□□□ -0.56
TNFRSF9-204ENST00000615230 TSPOAP1O95153 1857 aa11.54□□□□□ -0.56
TNFRSF9-204ENST00000615230 ALDH1L1O75891 902 aa11.54□□□□□ -0.56
TNFRSF9-204ENST00000615230 GCP02774 474 aa11.54□□□□□ -0.56
TNFRSF9-204ENST00000615230 PARP10Q53GL7 1025 aa11.54□□□□□ -0.56
TNFRSF9-204ENST00000615230 ZNF444Q8N0Y2 327 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF9-204ENST00000615230 OGFOD1Q8N543 542 aa11.54□□□□□ -0.56
TNFRSF9-204ENST00000615230 SLKQ9H2G2 1235 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF9-204ENST00000615230 MKNK2Q9HBH9 465 aa11.54□□□□□ -0.56
TNFRSF9-204ENST00000615230 U3KPZ7 1027 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF9-204ENST00000615230 TXLNBQ8N3L3 684 aa11.53□□□□□ -0.56
TNFRSF9-204ENST00000615230 IPO9Q96P70 1041 aaKnown RBP11.53□□□□□ -0.56
TNFRSF9-204ENST00000615230 BMP2KQ9NSY1 1161 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF9-204ENST00000615230 PLCG2P16885 1265 aa11.53□□□□□ -0.56
TNFRSF9-204ENST00000615230 CCDC12Q8WUD4 166 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF9-204ENST00000615230 GOLGA6L3A6NEY3 463 aa11.53□□□□□ -0.56
TNFRSF9-204ENST00000615230 CERS3Q8IU89 383 aa11.53□□□□□ -0.56
TNFRSF9-204ENST00000615230 PHAXQ9H814 394 aaKnown RBP11.53□□□□□ -0.56
TNFRSF9-204ENST00000615230 ODF2Q5BJF6 829 aa11.53□□□□□ -0.56
TNFRSF9-204ENST00000615230 SASS6Q6UVJ0 657 aa11.53□□□□□ -0.56
TNFRSF9-204ENST00000615230 IDH1O75874 414 aaKnown RBP11.52□□□□□ -0.56
TNFRSF9-204ENST00000615230 SLFN5Q08AF3 891 aa11.52□□□□□ -0.56
TNFRSF9-204ENST00000615230 STIM1Q13586 685 aa11.52□□□□□ -0.56
TNFRSF9-204ENST00000615230 GCC2Q8IWJ2 1684 aa11.52□□□□□ -0.57
TNFRSF9-204ENST00000615230 MAGEC2Q9UBF1 373 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF9-204ENST00000615230 VPS37CA5D8V6 355 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF9-204ENST00000615230 A0A0U1RQG5 324 aaPredicted RBP11.51□□□□□ -0.57
TNFRSF9-204ENST00000615230 MTMR7Q9Y216 660 aa11.51□□□□□ -0.57
TNFRSF9-204ENST00000615230 MAST3O60307 1309 aa11.51□□□□□ -0.57
TNFRSF9-204ENST00000615230 SLC4A3P48751 1232 aa11.51□□□□□ -0.57
TNFRSF9-204ENST00000615230 PDE4BQ07343 736 aa11.51□□□□□ -0.57
TNFRSF9-204ENST00000615230 CRNKL1Q9BZJ0 848 aaKnown RBP11.51□□□□□ -0.57
TNFRSF9-204ENST00000615230 CCNL1Q9UK58 526 aaPredicted RBP11.51□□□□□ -0.57
TNFRSF9-204ENST00000615230 PDE4AP27815 886 aa11.51□□□□□ -0.57
TNFRSF9-204ENST00000615230 HSP90AA2PQ14568 343 aaPredicted RBP11.51□□□□□ -0.57
TNFRSF9-204ENST00000615230 CT47A1Q5JQC4 288 aaPredicted RBP11.51□□□□□ -0.57
TNFRSF9-204ENST00000615230 GOLGA6L1Q8N7Z2 621 aa11.51□□□□□ -0.57
TNFRSF9-204ENST00000615230 C22orf23Q9BZE7 217 aa11.51□□□□□ -0.57
TNFRSF9-204ENST00000615230 ABCF2Q9UG63 623 aa11.51□□□□□ -0.57
TNFRSF9-204ENST00000615230 MAP3K2Q9Y2U5 619 aa11.51□□□□□ -0.57
TNFRSF9-204ENST00000615230 HOXC9P31274 260 aa11.51□□□□□ -0.57
TNFRSF9-204ENST00000615230 DZIP3Q86Y13 1208 aaKnown RBP11.51□□□□□ -0.57
TNFRSF9-204ENST00000615230 ACSBG1Q96GR2 724 aa11.51□□□□□ -0.57
TNFRSF9-204ENST00000615230 DISP3Q9P2K9 1392 aa11.5□□□□□ -0.57
TNFRSF9-204ENST00000615230 IQCA1Q86XH1 822 aa11.5□□□□□ -0.57
TNFRSF9-204ENST00000615230 ANKRD13DQ6ZTN6 518 aa11.5□□□□□ -0.57
TNFRSF9-204ENST00000615230 CHMP5Q9NZZ3 219 aa11.5□□□□□ -0.57
TNFRSF9-204ENST00000615230 CLEC11AQ9Y240 323 aa11.5□□□□□ -0.57
TNFRSF9-204ENST00000615230 FAM13BQ9NYF5 915 aa11.5□□□□□ -0.57
TNFRSF9-204ENST00000615230 SYCP1Q15431 976 aa11.5□□□□□ -0.57
TNFRSF9-204ENST00000615230 NAPBQ9H115 298 aa11.5□□□□□ -0.57
TNFRSF9-204ENST00000615230 RXRBP28702 533 aa11.49□□□□□ -0.57
TNFRSF9-204ENST00000615230 FLIIQ13045 1269 aa11.49□□□□□ -0.57
TNFRSF9-204ENST00000615230 CHD1LQ86WJ1 897 aa11.49□□□□□ -0.57
TNFRSF9-204ENST00000615230 FOXD4L1Q9NU39 408 aa11.49□□□□□ -0.57
TNFRSF9-204ENST00000615230 POLR3AO14802 1390 aaPredicted RBP11.49□□□□□ -0.57
TNFRSF9-204ENST00000615230 ZFYP08048 801 aaPredicted RBP11.49□□□□□ -0.57
TNFRSF9-204ENST00000615230 ARHGAP45Q92619 1136 aa11.49□□□□□ -0.57
TNFRSF9-204ENST00000615230 NIP7Q9Y221 180 aaKnown RBP eCLIP11.49□□□□□ -0.57
TNFRSF9-204ENST00000615230 ZBTB3Q9H5J0 574 aa11.48□□□□□ -0.57
TNFRSF9-204ENST00000615230 KIF5BP33176 963 aa11.48□□□□□ -0.57
TNFRSF9-204ENST00000615230 RAB34Q9BZG1 259 aa11.48□□□□□ -0.57
TNFRSF9-204ENST00000615230 ERVK-7P63135 1459 aa11.48□□□□□ -0.57
TNFRSF9-204ENST00000615230 NUP133Q8WUM0 1156 aa11.48□□□□□ -0.57
TNFRSF9-204ENST00000615230 FILIP1LQ4L180 1135 aa11.48□□□□□ -0.57
TNFRSF9-204ENST00000615230 BLOC1S2Q6QNY1 142 aa11.48□□□□□ -0.57
TNFRSF9-204ENST00000615230 LDHAL6AQ6ZMR3 332 aa11.48□□□□□ -0.57
TNFRSF9-204ENST00000615230 CTCFLQ8NI51 663 aaPredicted RBP11.48□□□□□ -0.57
TNFRSF9-204ENST00000615230 EIF6P56537 245 aaKnown RBP11.47□□□□□ -0.57
TNFRSF9-204ENST00000615230 FEZ1Q99689 392 aa11.47□□□□□ -0.57
TNFRSF9-204ENST00000615230 FANCIQ9NVI1 1328 aa11.47□□□□□ -0.57
TNFRSF9-204ENST00000615230 RTL1A6NKG5 1358 aa11.47□□□□□ -0.57
TNFRSF9-204ENST00000615230 ADCY10Q96PN6 1610 aa11.47□□□□□ -0.57
TNFRSF9-204ENST00000615230 HOXB7P09629 217 aa11.47□□□□□ -0.57
TNFRSF9-204ENST00000615230 PZPP20742 1482 aa11.47□□□□□ -0.57
TNFRSF9-204ENST00000615230 DDX49Q9Y6V7 483 aaKnown RBP11.47□□□□□ -0.57
TNFRSF9-204ENST00000615230 GPTP24298 496 aa11.47□□□□□ -0.57
TNFRSF9-204ENST00000615230 SH2D4AQ9H788 454 aa11.47□□□□□ -0.57
TNFRSF9-204ENST00000615230 BAG4O95429 457 aaKnown RBP11.46□□□□□ -0.57
TNFRSF9-204ENST00000615230 TTC37Q6PGP7 1564 aa11.46□□□□□ -0.57
TNFRSF9-204ENST00000615230 EVI5LQ96CN4 794 aa11.46□□□□□ -0.57
TNFRSF9-204ENST00000615230 MYO6Q9UM54 1294 aa11.46□□□□□ -0.57
TNFRSF9-204ENST00000615230 PDZRN3Q9UPQ7 1066 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms