RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 MICU3Q86XE3 530 aa4.51□□□□□ -1.69
LTN1-207ENST00000614971 CCDC34Q96HJ3 373 aa4.51□□□□□ -1.69
LTN1-207ENST00000614971 R3HCC1Q9Y3T6 440 aaKnown RBP4.51□□□□□ -1.69
LTN1-207ENST00000614971 KDM6BO15054 1643 aa4.51□□□□□ -1.69
LTN1-207ENST00000614971 NBPF6Q5VWK0 638 aa4.51□□□□□ -1.69
LTN1-207ENST00000614971 ERC1Q8IUD2 1116 aa4.51□□□□□ -1.69
LTN1-207ENST00000614971 NBPF4Q96M43 638 aa4.51□□□□□ -1.69
LTN1-207ENST00000614971 POLR3DP05423 398 aaPredicted RBP4.51□□□□□ -1.69
LTN1-207ENST00000614971 HCLS1P14317 486 aaPredicted RBP4.51□□□□□ -1.69
LTN1-207ENST00000614971 SKIDA1Q1XH10 827 aa4.51□□□□□ -1.69
LTN1-207ENST00000614971 FILIP1Q7Z7B0 1213 aa4.51□□□□□ -1.69
LTN1-207ENST00000614971 EDC3Q96F86 508 aaKnown RBP4.51□□□□□ -1.69
LTN1-207ENST00000614971 CCDC43Q96MW1 224 aaKnown RBP4.51□□□□□ -1.69
LTN1-207ENST00000614971 PRM3Q9NNZ6 103 aa4.51□□□□□ -1.69
LTN1-207ENST00000614971 NAP1L1P55209 391 aaKnown RBP4.51□□□□□ -1.69
LTN1-207ENST00000614971 RBM10P98175 930 aaKnown RBP4.51□□□□□ -1.69
LTN1-207ENST00000614971 SART3Q15020 963 aaKnown RBP4.51□□□□□ -1.69
LTN1-207ENST00000614971 AMOTQ4VCS5 1084 aa4.51□□□□□ -1.69
LTN1-207ENST00000614971 CWC22Q9HCG8 908 aaKnown RBP4.51□□□□□ -1.69
LTN1-207ENST00000614971 BIN1O00499 593 aa4.5□□□□□ -1.69
LTN1-207ENST00000614971 KINO60870 393 aaKnown RBP4.5□□□□□ -1.69
LTN1-207ENST00000614971 UBAC1Q9BSL1 405 aa4.5□□□□□ -1.69
LTN1-207ENST00000614971 ANKRD36BQ8N2N9 1353 aa4.5□□□□□ -1.69
LTN1-207ENST00000614971 ZNF518AQ6AHZ1 1483 aa4.5□□□□□ -1.69
LTN1-207ENST00000614971 CCDC69A6NI79 296 aa4.5□□□□□ -1.69
LTN1-207ENST00000614971 MYCNP04198 464 aaPredicted RBP4.5□□□□□ -1.69
LTN1-207ENST00000614971 HOXC9P31274 260 aa4.5□□□□□ -1.69
LTN1-207ENST00000614971 MCM4P33991 863 aa4.5□□□□□ -1.69
LTN1-207ENST00000614971 UIMC1Q96RL1 719 aa4.5□□□□□ -1.69
LTN1-207ENST00000614971 GLRX3O76003 335 aaKnown RBP4.5□□□□□ -1.69
LTN1-207ENST00000614971 FAM98CQ17RN3 349 aaKnown RBP4.5□□□□□ -1.69
LTN1-207ENST00000614971 KLHL10Q6JEL2 608 aa4.5□□□□□ -1.69
LTN1-207ENST00000614971 MIGA1Q8NAN2 632 aa4.5□□□□□ -1.69
LTN1-207ENST00000614971 RHPN1Q8TCX5 695 aa4.5□□□□□ -1.69
LTN1-207ENST00000614971 SIRT1Q96EB6 747 aa4.5□□□□□ -1.69
LTN1-207ENST00000614971 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.5□□□□□ -1.691e-6■■□□□ 12.5
LTN1-207ENST00000614971 PRAMEF22A3QJZ6 481 aa4.5□□□□□ -1.69
LTN1-207ENST00000614971 TPM3P06753 285 aa4.5□□□□□ -1.69
LTN1-207ENST00000614971 GRM1Q13255 1194 aa4.5□□□□□ -1.69
LTN1-207ENST00000614971 RSPH6AQ9H0K4 717 aa4.5□□□□□ -1.69
LTN1-207ENST00000614971 SNRPA1P09661 255 aaKnown RBP4.5□□□□□ -1.69
LTN1-207ENST00000614971 CHAMP1Q96JM3 812 aa4.5□□□□□ -1.69
LTN1-207ENST00000614971 NAPBQ9H115 298 aa4.5□□□□□ -1.69
LTN1-207ENST00000614971 NIP7Q9Y221 180 aaKnown RBP eCLIP4.5□□□□□ -1.69
LTN1-207ENST00000614971 NBPF7P0C2Y1 421 aaPredicted RBP4.5□□□□□ -1.69
LTN1-207ENST00000614971 DDB1Q16531 1140 aa4.5□□□□□ -1.69
LTN1-207ENST00000614971 SKOR2Q2VWA4 1001 aaPredicted RBP4.5□□□□□ -1.69
LTN1-207ENST00000614971 CCDC129Q6ZRS4 1044 aa4.5□□□□□ -1.69
LTN1-207ENST00000614971 MRPL50Q8N5N7 158 aaKnown RBP4.5□□□□□ -1.69
LTN1-207ENST00000614971 GNL3LQ9NVN8 582 aaKnown RBP4.5□□□□□ -1.69
LTN1-207ENST00000614971 TRIM35Q9UPQ4 493 aa4.5□□□□□ -1.69
LTN1-207ENST00000614971 ALDH1L2Q3SY69 923 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 TMX1Q9H3N1 280 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 C19orf44Q9H6X5 657 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 MSH6P52701 1360 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 PARD3Q8TEW0 1356 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 WDR78Q5VTH9 848 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 DZIP1Q86YF9 867 aaKnown RBP4.49□□□□□ -1.69
LTN1-207ENST00000614971 CWC25Q9NXE8 425 aaPredicted RBP4.49□□□□□ -1.69
LTN1-207ENST00000614971 RIMBP2O15034 1052 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 RFC4P35249 363 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 NBPF5PQ86XG9 351 aaPredicted RBP4.49□□□□□ -1.69
LTN1-207ENST00000614971 SPATA32Q96LK8 384 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 HYPKQ9NX55 129 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 PNMA6EA0A0J9YXQ4 647 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 PRIM1P49642 420 aaKnown RBP4.49□□□□□ -1.69
LTN1-207ENST00000614971 ENOX2Q16206 610 aaKnown RBP4.49□□□□□ -1.69
LTN1-207ENST00000614971 ZGPATQ8N5A5 531 aaKnown RBP4.49□□□□□ -1.69
LTN1-207ENST00000614971 NACAP1Q9BZK3 213 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 MKNK2Q9HBH9 465 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 YTHDC2Q9H6S0 1430 aaKnown RBP4.49□□□□□ -1.69
LTN1-207ENST00000614971 A0A0U1RQG5 324 aaPredicted RBP4.49□□□□□ -1.69
LTN1-207ENST00000614971 GRM8O00222 908 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 CT47B1P0C2W7 299 aaPredicted RBP4.49□□□□□ -1.69
LTN1-207ENST00000614971 PTMSP20962 102 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 TSR1Q2NL82 804 aaKnown RBP4.49□□□□□ -1.69
LTN1-207ENST00000614971 CEP170Q5SW79 1584 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 TNPO1Q92973 898 aaKnown RBP4.49□□□□□ -1.69
LTN1-207ENST00000614971 AK7Q96M32 723 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 ZKSCAN3Q9BRR0 538 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 ECHDC1Q9NTX5 307 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 RALGAPBQ86X10 1494 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 ASXL1Q8IXJ9 1541 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 DUOX2Q9NRD8 1548 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 NPATQ14207 1427 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 TAF5LO75529 589 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 PDE1AP54750 535 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 RBM26Q5T8P6 1007 aaKnown RBP4.49□□□□□ -1.69
LTN1-207ENST00000614971 BRF1Q92994 677 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 TNMDQ9H2S6 317 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 BICC1Q9H694 974 aaKnown RBP4.49□□□□□ -1.69
LTN1-207ENST00000614971 STX8Q9UNK0 236 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 NSFL1CQ9UNZ2 370 aaKnown RBP4.49□□□□□ -1.69
LTN1-207ENST00000614971 NPHP3Q7Z494 1330 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 ANKRD18BA2A2Z9 1011 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 FAM173BQ6P4H8 233 aa4.49□□□□□ -1.69
LTN1-207ENST00000614971 PDE4DIPQ5VU43 2346 aa4.48□□□□□ -1.69
LTN1-207ENST00000614971 ERCC6L2Q5T890 1561 aa4.48□□□□□ -1.69
LTN1-207ENST00000614971 FAM170AA1A519 330 aa4.48□□□□□ -1.69
LTN1-207ENST00000614971 GOLGA8BA8MQT2 603 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms