RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 CCDC183Q5T5S1 534 aa17.31■□□□□ 0.36
SNPH-203ENST00000614659 TBC1D9Q6ZT07 1266 aa17.31■□□□□ 0.36
SNPH-203ENST00000614659 HSP90B2PQ58FF3 399 aa17.31■□□□□ 0.36
SNPH-203ENST00000614659 TARBP1Q13395 1621 aaKnown RBP17.31■□□□□ 0.36
SNPH-203ENST00000614659 FLIIQ13045 1269 aa17.31■□□□□ 0.36
SNPH-203ENST00000614659 BLMP54132 1417 aaPredicted RBP17.31■□□□□ 0.36
SNPH-203ENST00000614659 PER1O15534 1290 aaPredicted RBP17.3■□□□□ 0.36
SNPH-203ENST00000614659 NUTM1Q86Y26 1132 aa17.3■□□□□ 0.36
SNPH-203ENST00000614659 CEP57L1Q8IYX8 460 aa17.3■□□□□ 0.36
SNPH-203ENST00000614659 SNX21Q969T3 373 aa17.3■□□□□ 0.36
SNPH-203ENST00000614659 CDC5LQ99459 802 aaKnown RBP17.3■□□□□ 0.36
SNPH-203ENST00000614659 SCAND2PQ9GZW5 306 aaPredicted RBP17.3■□□□□ 0.36
SNPH-203ENST00000614659 POLD1P28340 1107 aa17.3■□□□□ 0.36
SNPH-203ENST00000614659 RAI14Q9P0K7 980 aa17.3■□□□□ 0.36
SNPH-203ENST00000614659 SOS1Q07889 1333 aaPredicted RBP17.3■□□□□ 0.36
SNPH-203ENST00000614659 METTL24Q5JXM2 366 aa17.3■□□□□ 0.36
SNPH-203ENST00000614659 ZSCAN29Q8IWY8 852 aaPredicted RBP17.3■□□□□ 0.36
SNPH-203ENST00000614659 CCDC69A6NI79 296 aa17.29■□□□□ 0.36
SNPH-203ENST00000614659 DCTN1Q14203 1278 aa17.29■□□□□ 0.36
SNPH-203ENST00000614659 TNPO1Q92973 898 aaKnown RBP17.29■□□□□ 0.36
SNPH-203ENST00000614659 ME1P48163 572 aa17.29■□□□□ 0.36
SNPH-203ENST00000614659 MAP3K11Q16584 847 aa17.29■□□□□ 0.36
SNPH-203ENST00000614659 TRMT112Q9UI30 125 aaKnown RBP17.29■□□□□ 0.36
SNPH-203ENST00000614659 RUFY1Q96T51 708 aa17.29■□□□□ 0.36
SNPH-203ENST00000614659 U3KPZ7 1027 aaPredicted RBP17.29■□□□□ 0.36
SNPH-203ENST00000614659 SNRPA1P09661 255 aaKnown RBP17.29■□□□□ 0.36
SNPH-203ENST00000614659 USHBP1Q8N6Y0 703 aa17.29■□□□□ 0.36
SNPH-203ENST00000614659 EVI5LQ96CN4 794 aa17.29■□□□□ 0.36
SNPH-203ENST00000614659 LIMCH1Q9UPQ0 1083 aa17.29■□□□□ 0.36
SNPH-203ENST00000614659 SMTNL1A8MU46 457 aa17.28■□□□□ 0.36
SNPH-203ENST00000614659 IFIT5Q13325 482 aaKnown RBP17.28■□□□□ 0.36
SNPH-203ENST00000614659 IMMTQ16891 758 aaKnown RBP17.28■□□□□ 0.36
SNPH-203ENST00000614659 LRP2BPQ9P2M1 347 aa17.28■□□□□ 0.36
SNPH-203ENST00000614659 ANKRD18BA2A2Z9 1011 aa17.28■□□□□ 0.36
SNPH-203ENST00000614659 IL2RBP14784 551 aa17.28■□□□□ 0.36
SNPH-203ENST00000614659 ANKIB1Q9P2G1 1089 aa17.28■□□□□ 0.36
SNPH-203ENST00000614659 NOL7Q9UMY1 257 aaKnown RBP17.28■□□□□ 0.36
SNPH-203ENST00000614659 SMARCA5O60264 1052 aaPredicted RBP17.28■□□□□ 0.36
SNPH-203ENST00000614659 SLC5A1P13866 664 aa17.28■□□□□ 0.36
SNPH-203ENST00000614659 ABCC1P33527 1531 aa17.28■□□□□ 0.36
SNPH-203ENST00000614659 MRPL50Q8N5N7 158 aaKnown RBP17.28■□□□□ 0.36
SNPH-203ENST00000614659 PDILTQ8N807 584 aa17.28■□□□□ 0.36
SNPH-203ENST00000614659 PATL2C9JE40 543 aaKnown RBP17.27■□□□□ 0.36
SNPH-203ENST00000614659 CDR1P51861 262 aa17.27■□□□□ 0.36
SNPH-203ENST00000614659 STK3Q13188 491 aa17.27■□□□□ 0.36
SNPH-203ENST00000614659 CNKSR2Q8WXI2 1034 aa17.27■□□□□ 0.36
SNPH-203ENST00000614659 LRRFIP2Q9Y608 721 aaKnown RBP17.27■□□□□ 0.36
SNPH-203ENST00000614659 MAGI2Q86UL8 1455 aa17.27■□□□□ 0.36
SNPH-203ENST00000614659 RNF123Q5XPI4 1314 aa17.27■□□□□ 0.36
SNPH-203ENST00000614659 DDX46Q7L014 1031 aaKnown RBP17.27■□□□□ 0.35
SNPH-203ENST00000614659 MAGEC2Q9UBF1 373 aaPredicted RBP17.27■□□□□ 0.35
SNPH-203ENST00000614659 C8orf34Q49A92 452 aa17.26■□□□□ 0.35
SNPH-203ENST00000614659 MCM5P33992 734 aa17.26■□□□□ 0.35
SNPH-203ENST00000614659 ANAPC15P60006 121 aa17.26■□□□□ 0.35
SNPH-203ENST00000614659 ARHGEF10O15013 1369 aa17.26■□□□□ 0.35
SNPH-203ENST00000614659 MIS18AQ9NYP9 233 aa17.26■□□□□ 0.35
SNPH-203ENST00000614659 CHRNA2Q15822 529 aa17.25■□□□□ 0.35
SNPH-203ENST00000614659 TXLNBQ8N3L3 684 aa17.25■□□□□ 0.35
SNPH-203ENST00000614659 KIF2AO00139 706 aaPredicted RBP17.25■□□□□ 0.35
SNPH-203ENST00000614659 CTAGE5O15320 804 aa17.25■□□□□ 0.35
SNPH-203ENST00000614659 RRP9O43818 475 aaKnown RBP17.25■□□□□ 0.35
SNPH-203ENST00000614659 ANKRD44Q8N8A2 993 aa17.25■□□□□ 0.35
SNPH-203ENST00000614659 MYD88Q99836 296 aa17.25■□□□□ 0.35
SNPH-203ENST00000614659 PLXNC1O60486 1568 aa17.25■□□□□ 0.35
SNPH-203ENST00000614659 SOGA3Q5TF21 947 aa17.25■□□□□ 0.35
SNPH-203ENST00000614659 CALRP27797 417 aaKnown RBP17.25■□□□□ 0.35
SNPH-203ENST00000614659 PRPF40BQ6NWY9 871 aaKnown RBP17.25■□□□□ 0.35
SNPH-203ENST00000614659 CEP131Q9UPN4 1083 aa17.25■□□□□ 0.35
SNPH-203ENST00000614659 RRP12Q5JTH9 1297 aaKnown RBP17.24■□□□□ 0.35
SNPH-203ENST00000614659 ECHDC1Q9NTX5 307 aa17.24■□□□□ 0.35
SNPH-203ENST00000614659 HMG20BQ9P0W2 317 aa17.24■□□□□ 0.35
SNPH-203ENST00000614659 RBM10P98175 930 aaKnown RBP17.24■□□□□ 0.35
SNPH-203ENST00000614659 ATP2B2Q01814 1243 aa17.24■□□□□ 0.35
SNPH-203ENST00000614659 KLHL40Q2TBA0 621 aa17.24■□□□□ 0.35
SNPH-203ENST00000614659 SERPINC1P01008 464 aa17.24■□□□□ 0.35
SNPH-203ENST00000614659 PCDHB15Q9Y5E8 787 aa17.24■□□□□ 0.35
SNPH-203ENST00000614659 FLT4P35916 1363 aa17.23■□□□□ 0.35
SNPH-203ENST00000614659 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.23■□□□□ 0.35
SNPH-203ENST00000614659 LDHCP07864 332 aa17.23■□□□□ 0.35
SNPH-203ENST00000614659 STIM1Q13586 685 aa17.23■□□□□ 0.35
SNPH-203ENST00000614659 UVSSAQ2YD98 709 aa17.23■□□□□ 0.35
SNPH-203ENST00000614659 SYCE3A1L190 88 aa17.23■□□□□ 0.35
SNPH-203ENST00000614659 SSFA2P28290 1259 aa17.23■□□□□ 0.35
SNPH-203ENST00000614659 TDO2P48775 406 aa17.23■□□□□ 0.35
SNPH-203ENST00000614659 CCDC112Q8NEF3 446 aa17.23■□□□□ 0.35
SNPH-203ENST00000614659 FKBP4Q02790 459 aaKnown RBP eCLIP17.23■□□□□ 0.35
SNPH-203ENST00000614659 AKAP4Q5JQC9 854 aa17.23■□□□□ 0.35
SNPH-203ENST00000614659 NPATQ14207 1427 aa17.23■□□□□ 0.35
SNPH-203ENST00000614659 NYXQ9GZU5 481 aa17.23■□□□□ 0.35
SNPH-203ENST00000614659 MAGI3Q5TCQ9 1506 aa17.22■□□□□ 0.35
SNPH-203ENST00000614659 SKAP1Q86WV1 359 aa17.22■□□□□ 0.35
SNPH-203ENST00000614659 CCDC83Q8IWF9 413 aa17.22■□□□□ 0.35
SNPH-203ENST00000614659 SPC24Q8NBT2 197 aa17.22■□□□□ 0.35
SNPH-203ENST00000614659 CDK5RAP3Q96JB5 506 aa17.22■□□□□ 0.35
SNPH-203ENST00000614659 CWC25Q9NXE8 425 aaPredicted RBP17.22■□□□□ 0.35
SNPH-203ENST00000614659 SPATA31E1Q6ZUB1 1445 aa17.22■□□□□ 0.35
SNPH-203ENST00000614659 CEBPZQ03701 1054 aaKnown RBP17.22■□□□□ 0.35
SNPH-203ENST00000614659 F6X3S4 739 aa17.21■□□□□ 0.35
SNPH-203ENST00000614659 SPTY2D1Q68D10 685 aaPredicted RBP17.21■□□□□ 0.35
SNPH-203ENST00000614659 AIDAQ96BJ3 306 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms