RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 CYP46A1Q9Y6A2 500 aa16.56■□□□□ 0.24
HPS1-215ENST00000613394 MED14O60244 1454 aa16.55■□□□□ 0.24
HPS1-215ENST00000613394 STX6O43752 255 aa16.55■□□□□ 0.24
HPS1-215ENST00000613394 BOLA2Q9H3K6 86 aa16.55■□□□□ 0.24
HPS1-215ENST00000613394 LARP1BQ659C4 914 aaKnown RBP16.55■□□□□ 0.24
HPS1-215ENST00000613394 BICD2Q8TD16 824 aa16.55■□□□□ 0.24
HPS1-215ENST00000613394 ARHGEF40Q8TER5 1519 aa16.55■□□□□ 0.24
HPS1-215ENST00000613394 MYL6BP14649 208 aa16.55■□□□□ 0.24
HPS1-215ENST00000613394 HSP90AB4PQ58FF6 505 aa16.55■□□□□ 0.24
HPS1-215ENST00000613394 TFIP11Q9UBB9 837 aaKnown RBP16.55■□□□□ 0.24
HPS1-215ENST00000613394 LIMCH1Q9UPQ0 1083 aa16.55■□□□□ 0.24
HPS1-215ENST00000613394 ADCY5O95622 1261 aa16.54■□□□□ 0.24
HPS1-215ENST00000613394 ESCO1Q5FWF5 840 aa16.54■□□□□ 0.24
HPS1-215ENST00000613394 ADGRB2O60241 1585 aa16.54■□□□□ 0.24
HPS1-215ENST00000613394 BRD1O95696 1058 aa16.54■□□□□ 0.24
HPS1-215ENST00000613394 FAM173BQ6P4H8 233 aa16.54■□□□□ 0.24
HPS1-215ENST00000613394 RIC3Q7Z5B4 369 aa16.54■□□□□ 0.24
HPS1-215ENST00000613394 IL17REQ8NFR9 667 aa16.54■□□□□ 0.24
HPS1-215ENST00000613394 ALKQ9UM73 1620 aa16.54■□□□□ 0.24
HPS1-215ENST00000613394 GJB2P29033 226 aa16.54■□□□□ 0.24
HPS1-215ENST00000613394 DNM1Q05193 864 aaKnown RBP16.54■□□□□ 0.24
HPS1-215ENST00000613394 TSC1Q92574 1164 aa16.54■□□□□ 0.24
HPS1-215ENST00000613394 LTKP29376 864 aa16.53■□□□□ 0.24
HPS1-215ENST00000613394 NOL7Q9UMY1 257 aaKnown RBP16.53■□□□□ 0.24
HPS1-215ENST00000613394 FRMPD1Q5SYB0 1578 aa16.53■□□□□ 0.24
HPS1-215ENST00000613394 MYO3AQ8NEV4 1616 aa16.53■□□□□ 0.24
HPS1-215ENST00000613394 H3BQV1 296 aa16.53■□□□□ 0.24
HPS1-215ENST00000613394 CSB-PGBD3P0DP91 1061 aa16.53■□□□□ 0.24
HPS1-215ENST00000613394 IFFO2Q5TF58 517 aa16.53■□□□□ 0.24
HPS1-215ENST00000613394 LGR6Q9HBX8 967 aa16.53■□□□□ 0.24
HPS1-215ENST00000613394 KCNQ3O43525 872 aa16.53■□□□□ 0.24
HPS1-215ENST00000613394 CKAP2LQ8IYA6 745 aa16.53■□□□□ 0.24
HPS1-215ENST00000613394 LRRC59Q96AG4 307 aaKnown RBP16.53■□□□□ 0.24
HPS1-215ENST00000613394 AATKQ6ZMQ8 1374 aa16.52■□□□□ 0.24
HPS1-215ENST00000613394 PKNOX2Q96KN3 472 aa16.52■□□□□ 0.24
HPS1-215ENST00000613394 PRDM10Q9NQV6 1147 aa16.52■□□□□ 0.24
HPS1-215ENST00000613394 SOS1Q07889 1333 aaPredicted RBP16.52■□□□□ 0.24
HPS1-215ENST00000613394 ARHGEF28Q8N1W1 1705 aaKnown RBP16.52■□□□□ 0.24
HPS1-215ENST00000613394 SYT1P21579 422 aa16.52■□□□□ 0.23
HPS1-215ENST00000613394 CWF19L2Q2TBE0 894 aaKnown RBP16.52■□□□□ 0.23
HPS1-215ENST00000613394 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.52■□□□□ 0.23
HPS1-215ENST00000613394 ATP7BP35670 1465 aa16.52■□□□□ 0.23
HPS1-215ENST00000613394 KIAA0232Q92628 1395 aa16.52■□□□□ 0.23
HPS1-215ENST00000613394 ROBO2Q9HCK4 1378 aa16.52■□□□□ 0.23
HPS1-215ENST00000613394 GLRX3O76003 335 aaKnown RBP16.52■□□□□ 0.23
HPS1-215ENST00000613394 ZSCAN22P10073 491 aaPredicted RBP16.52■□□□□ 0.23
HPS1-215ENST00000613394 CCDC183Q5T5S1 534 aa16.52■□□□□ 0.23
HPS1-215ENST00000613394 RAB11FIP3O75154 756 aa16.51■□□□□ 0.23
HPS1-215ENST00000613394 RASEFQ8IZ41 740 aa16.51■□□□□ 0.23
HPS1-215ENST00000613394 DNAJC2Q99543 621 aaKnown RBP16.51■□□□□ 0.23
HPS1-215ENST00000613394 PIK3C2BO00750 1634 aa16.51■□□□□ 0.23
HPS1-215ENST00000613394 FLT4P35916 1363 aa16.51■□□□□ 0.23
HPS1-215ENST00000613394 ANAPC15P60006 121 aa16.51■□□□□ 0.23
HPS1-215ENST00000613394 ZNF592Q92610 1267 aa16.51■□□□□ 0.23
HPS1-215ENST00000613394 NEO1Q92859 1461 aa16.51■□□□□ 0.23
HPS1-215ENST00000613394 DDX11Q96FC9 970 aa16.5■□□□□ 0.23
HPS1-215ENST00000613394 MAP3K2Q9Y2U5 619 aa16.5■□□□□ 0.23
HPS1-215ENST00000613394 VIRMAQ69YN4 1812 aaKnown RBP16.5■□□□□ 0.23
HPS1-215ENST00000613394 CDK12Q9NYV4 1490 aaPredicted RBP16.5■□□□□ 0.23
HPS1-215ENST00000613394 TSPOAP1O95153 1857 aa16.5■□□□□ 0.23
HPS1-215ENST00000613394 ZRSR1Q15695 479 aaKnown RBP16.5■□□□□ 0.23
HPS1-215ENST00000613394 PDCL3Q9H2J4 239 aa16.5■□□□□ 0.23
HPS1-215ENST00000613394 SNX14Q9Y5W7 946 aa16.5■□□□□ 0.23
HPS1-215ENST00000613394 ATP10DQ9P241 1426 aa16.5■□□□□ 0.23
HPS1-215ENST00000613394 FAM184AQ8NB25 1140 aa16.5■□□□□ 0.23
HPS1-215ENST00000613394 IL25Q9H293 177 aa16.5■□□□□ 0.23
HPS1-215ENST00000613394 ARHGAP31Q2M1Z3 1444 aa16.5■□□□□ 0.23
HPS1-215ENST00000613394 KIF24Q5T7B8 1368 aa16.49■□□□□ 0.23
HPS1-215ENST00000613394 CYP2E1P05181 493 aaPredicted RBP16.49■□□□□ 0.23
HPS1-215ENST00000613394 PIP4K2AP48426 406 aaPredicted RBP16.49■□□□□ 0.23
HPS1-215ENST00000613394 CFAP74Q9C0B2 1584 aa16.49■□□□□ 0.23
HPS1-215ENST00000613394 CPS1P31327 1500 aa16.49■□□□□ 0.23
HPS1-215ENST00000613394 TNRQ92752 1358 aa16.49■□□□□ 0.23
HPS1-215ENST00000613394 HOXC9P31274 260 aa16.48■□□□□ 0.23
HPS1-215ENST00000613394 GOLGA6L6A8MZA4 724 aa16.48■□□□□ 0.23
HPS1-215ENST00000613394 NEXNQ0ZGT2 675 aa16.48■□□□□ 0.23
HPS1-215ENST00000613394 INTS4Q96HW7 963 aaKnown RBP16.48■□□□□ 0.23
HPS1-215ENST00000613394 TRIM5Q9C035 493 aa16.48■□□□□ 0.23
HPS1-215ENST00000613394 MAP2P11137 1827 aaKnown RBP16.48■□□□□ 0.23
HPS1-215ENST00000613394 KLHDC4Q8TBB5 520 aa16.48■□□□□ 0.23
HPS1-215ENST00000613394 NEUROD6Q96NK8 337 aa16.48■□□□□ 0.23
HPS1-215ENST00000613394 OSBPL3Q9H4L5 887 aa16.48■□□□□ 0.23
HPS1-215ENST00000613394 ECHDC1Q9NTX5 307 aa16.48■□□□□ 0.23
HPS1-215ENST00000613394 SGSM2O43147 1006 aa16.47■□□□□ 0.23
HPS1-215ENST00000613394 RNF20Q5VTR2 975 aa16.47■□□□□ 0.23
HPS1-215ENST00000613394 BLOC1S2Q6QNY1 142 aa16.47■□□□□ 0.23
HPS1-215ENST00000613394 A0A0G2JS52 829 aa16.47■□□□□ 0.23
HPS1-215ENST00000613394 NEURL4Q96JN8 1562 aa16.47■□□□□ 0.23
HPS1-215ENST00000613394 F13A1P00488 732 aa16.47■□□□□ 0.23
HPS1-215ENST00000613394 PLEKHO1Q53GL0 409 aaPredicted RBP16.47■□□□□ 0.23
HPS1-215ENST00000613394 NLRP2Q9NX02 1062 aa16.47■□□□□ 0.23
HPS1-215ENST00000613394 KRT85P78386 507 aa16.46■□□□□ 0.23
HPS1-215ENST00000613394 SASS6Q6UVJ0 657 aa16.46■□□□□ 0.23
HPS1-215ENST00000613394 CHMP4AQ9BY43 222 aa16.46■□□□□ 0.23
HPS1-215ENST00000613394 HSPA4P34932 840 aa16.46■□□□□ 0.23
HPS1-215ENST00000613394 UBE2HP62256 183 aa16.46■□□□□ 0.23
HPS1-215ENST00000613394 PLEKHG3A1L390 1219 aa16.46■□□□□ 0.23
HPS1-215ENST00000613394 DDX58O95786 925 aaKnown RBP16.46■□□□□ 0.23
HPS1-215ENST00000613394 CCDC192P0DO97 292 aa16.46■□□□□ 0.23
HPS1-215ENST00000613394 IBTKQ9P2D0 1353 aaPredicted RBP16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms